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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0368600 |
| Transcript ID | LotjaGi2g1v0368600.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP galactose transporter-related protein; TAIR: AT5G59740.1 UDP-N-acetylglucosamine (UAA) transporter family; Swiss-Prot: sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B; TrEMBL-Plants: tr|A0A151TM63|A0A151TM63_CAJCA Adenosine 3'-phospho 5'-phosphosulfate transporter 1; Found in the gene: LotjaGi2g1v0368600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86613028..86617264) extracted from Lotus japonicus Gifu genome v1.2.
ACTTCACCATCTTCTTCTTCATCTTCATCTTCACCGGATTGGAAATGGAGACAGAGCAAGCTATGGAAAGGCACATTCGC CGTCACCGGAATCATGCTCACCCTCGTTACCTATGGCGTCTTGCAGGTTCATCCATCAATTTTTCTCTTCCATTTTTCCA TTTCTTAGAATCCCCTTACACTGCTTAATTTGCAATTGCAATGGTTCTGTTCCTTTTTGCAAATAGAGTACAGTTATTTA TGATTATTTGGTATTTGTTTGTTTCAGGAAAAGATCATGAGAGTGCCATATGGAGTGAACAAGGATTACTTCAAATATTC TCTCTTTCTTGTTTTCTGCAACCGTATCACAACCTCAGCTGTTTCTGCTGGTGCTTTACTGGTAACTAAGTAGTACAAAT TGCCATGGTTAATTTTCACACATTTTATAGCATGTTCGGATTAGCTTGTAATTTCTCAAAATCAATTCTAACACTAAGAA GCTACTCGCAGAAGCTTCTTTCACCGAACTAATTTTGGTTTTAGAATTAGTTGTTGAAGAATTTCCAAACATGCACTTAC TGTTTGATTTTTTCCCGTGGTAATAAAATTTCGACATTACCTGAATCCATTATCATTAGTGACTTGACTTGGTGTTTGAA ATGACAACCTTTGTTTCTTATGTCTGCATTGCATTTGCTAAGCCAGAATTTTCCTCAAATTTATTATTTTTAAACTTTCG AACAGGCAAGTAATAAAGCATTGGATCCAGTAGCTCCTATTTATACGTATTGCCTTGTGTCAGTATCAAACATACTTACC ACAACTTGTCAGTATGAGGTAAGCTGCTGCATACATGCCTGTGATAATATGTTCATTGGTGTTGATATTATTATTGGCAG GAAGTTGATACCTGTGTTTTCTTTATGATCATATGTCTTTCTCCAGGCTCTCAAATATGTCAGTTTCCCTGTTCAGACTC TTGCAAAATGCGCTAAAATGATACCTGTTATGGTAGGTCAAACTTTAGTACTTGCCTTATTATATCGGTATTCCTAACCT ATGCAATATTACATAGAATAAGAATATAAAAGTGAAATGCTTTTATTGAAGAAGAAATCATTTATACATCAGAATTACAA ATATACTTTTTTCCCATAAAAGTTTTGATTTTTCTTGTCTTAGCTTATGCAGTGTTGCATAAGTTAGACTTGAAAAAACC TTCTTTTGTTCAGATAATTATGATCATTTTCTGTTTGCTATATTCATTACACATTGTTGATATTCATATATTAATTTGTA GCTTATTTTTCATCTTCTCTCAGTCACCGTTGGTTGCTTCAAGGAATTGAAGTAACTACATTGTATTGTTCTTTTACACT GAATGCGTAATGCTTTCTCTCTCTCTTCACAATCATGTGTAATCGGTATATTATTGGCCCCTTCCTTCCTGAAAACAATG TCTATGAAGAGTAAAAAAATCAACTTACATGGTTTATTCCTTCCATACTTATGATATTGCAGGTTAAGATGGATTGATGT GATTCCTTCTCGTACATTGAATCTTAATTTCTGTCTTCGAATATTATATAGGTTTGGGGCACTCTCATAATGCAGAAGAG ATACAAGGGACCTGACTATTTATTAGCCTTTTTAGTAACCCTTGGATGCTCAGTATTCATTTTATATCCGGTGATTATTT TGTCTTTAACCCTAGTTCTTTTTTTCTTTTTCATCAATCTTTTTGTTTGTAATTCTTTTCTATTTAGAATCAACAATGAA TGTCGATATGCTACCATATTAGGCTTATTCAGTGTTGGTTTTAAGAAGGCTATTTGCACTATTATGTTCCTAAGCAGGAA GTTCTAAATTGACCCTGAAAAAGTTTTCAAATTCTTTCTCTATTTAAATGTACCAAAGTAAATAAAGCATGGTTCAAACT TATTGATTTGAATTTGACAATTACAAATCCACCCCATTTCTTTGATAAATTGATATCTAACTTAGGATCCACCACACACA GACTTTTGAAAAAATTGAGTAATTAACTGCAGACTTGCCATTCAGAATATATTCTTATAGCAATTGATAAGTTCCCGTTT GTGACATGCTGTTATCTCATCTTCCATTTAATAGTATGTTATCAGATTATTACATTCTTAAGATTGATTAATCAATGCCA TTGAAGATGATGCACAATGTCCTTGATTATCTGGCAGCATTCTGTACTAAACTAATGTAATTCTTGTGTGTTGTCGTTGT AGGCAGGAACTGACATGAGTCCATATGGAAGGGGAAGGGAAAATACTGTTTGGGGTATTCTCTTGATGCTTGGTTATCTT GGGTATCACTACAAAACTCAATCCATCTTTCTATGATAAGTGATTTTACGTATTATCTTAAACAAACAAACAAAAAAAAC CCTCTAAATTCAGTGCTACTTCACTCATTATGACATGTAAGGTTTTTAATATTTCAAACTATTTTCGTTTGAGGTTCAGA ATACCTTGCCTTCCTGCAGATGTTTTGTGAAGACCTATGTAATTATTTTAAATTAGTTTTTATGTTGATTTGAGGAGCAT TTGTTATTCAAAACCATGTTATATGATTAAAATCTTATTTTGCAACACTTTGCAGTTTGTACATTCTTGCACATTCTTAA ATGCACAAGTTGATGCTAACATTACTAGTTTTATCCTTTTTGCCAATTTACTTTAAGAATTTAAATTAATATAAAAAAAA TCAAGTGCTAGTCTTTCTTTGAATCACATACCAAGTTTTTTTCCCCAATAGGTGTGATGGCTTTACAAGCACATTCCAAG ATAAGCTGTTCAGAGGCTATGACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGTATTCTTAGCCTG ACAGGTTAGTTTCAGGCAGTGAAATTTTAGGTTGAATGTTATATTTTTGTCATATTTAGTTTAGGCAGTGTAAATTCTTT TCTTCAGTGAGAATTCTCTTGGACTTTTACACGTACATGTTTATTAAAATATTGGTTCAGAATGAGAGAAAAGAGTGATA TTTTTTAGAAAATCATTAACAACCTGTAATAAACTTTTAACTGCACTAACAAACTCTTCAATTCACTCTTCTCCTAACAC AAACCCTAACAACTTGTTTCTTTTCCAGCTTTGTGGTTGGAAATCTTTTGATGTTTTTTATTCAGGTCTTATCTTACAGG GACATTTATTACCAGCAGTTGAGTTTGTTTCTAGCCACAGTGATTGCTTCTTTGACATAGCATTGCTTTCAACTGTAAGG GAATTTGCCCTTCTGCTTCAATTTTTATAATACATTATTGATAACCTGCTCTTCTTTTCTGATTGTTTTGATGAAGTTTT GAAACCTATAATGCTTTTTCTCTGTTAGAGCAGCTAGTCGTGCAGGGCCTTTGGTGCAAGATGGCGTAGGGCCCAAAGAG TGGAAGGTTTATTCTAGAAGGGGAAAAGGGAATCTCCAGGTGGATAACTAATTCCCTAACTTTCAGGAAGAGAGAGAGCC AACGATTGTAATAGGACTTTACTATAAGAAGGTAGTTAGAGGAGGGTCGAGGGGTATCTTATTTTGATAGCTGTGTAAGG AAATGGATAGGAAGCAATAAGCTTCCTATTAGGAGCTGAGCTCTTGTCAGATTTAGGGAACCATTCCCCTTCTCTGTAAT TTACCAAGTATAATTCAATAAGCAATCATTTCAGTTTCAGTTCATTTACCTCTATTCTGTGTTTGAGACCATTGTTAGGA AATCGATTCCTAACATTCTCCTTCCTTTTTGGAAAAATAAAAAACACTCCCACTTTTTCATCTTCCATTTCACTGAACAG ATTTTGTATAATATCAATTTCCACAGGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGTACTTTTGGTGCT CTAACATTTGCTATTATAATGACAACAAGACAGGTAACCATTGCATAAAAATGGCAAAATTTATACTATCCTTTCCATTA TTCTTTTTATCAGTGTTTTTCATATTTTGTTCTAATTGCTGCAGTTGGTGAGCATTCTACTATCATGTGTGTGGTTTTCA CATCCTCTTAGCTGGGAACAATGGATTGGAGCGGTAAGACTTACTTTTACCCTTTTTAAACAGACTGGCTATGTTTGGAT ATCCATGGTCGCCAGTGCAAACGGACTAAGCACACACTTCAAGACAAAACTTGAATGAAACTCTTCTTATAGATTGA
CDS sequence (LotjaGi2g1v0368600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCACCCTCGTTACCTATGGCGTCTTGCAGGAAAAGATCATGAGAGTGCCATATGGAGTGAACAAGGATTACTTCAA ATATTCTCTCTTTCTTGTTTTCTGCAACCGTATCACAACCTCAGCTGTTTCTGCTGGTGCTTTACTGGCAAGTAATAAAG CATTGGATCCAGTAGCTCCTATTTATACGTATTGCCTTGTGTCAGTATCAAACATACTTACCACAACTTGTCAGTATGAG GTTTGGGGCACTCTCATAATGCAGAAGAGATACAAGGGACCTGACTATTTATTAGCCTTTTTAGTAACCCTTGGATGCTC AGTATTCATTTTATATCCGGCAGGAACTGACATGAGTCCATATGGAAGGGGAAGGGAAAATACTGTTTGGGGTATTCTCT TGATGCTTGGTTATCTTGGGTGTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTCAGAGGCTATGACATGGAGATA CATAATCAGATATTCTATACTACTTTGTGTTCTTGTATTCTTAGCCTGACAGGTCTTATCTTACAGGGACATTTATTACC AGCAGTTGAGTTTGTTTCTAGCCACAGTGATTGCTTCTTTGACATAGCATTGCTTTCAACTGTTGCAACAGCTAGTCAAT TTTTTATTTCCTACACAATTCGTACTTTTGGTGCTCTAACATTTGCTATTATAATGACAACAAGACAGTTGGTGAGCATT CTACTATCATGTGTGTGGTTTTCACATCCTCTTAGCTGGGAACAATGGATTGGAGCGGTAAGACTTACTTTTACCCTTTT TAAACAGACTGGCTATGTTTGGATATCCATGGTCGCCAGTGCAAACGGACTAAGCACACACTTCAAGACAAAACTTGAAT GA
Protein sequence (LotjaGi2g1v0368600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALLASNKALDPVAPIYTYCLVSVSNILTTTCQYE VWGTLIMQKRYKGPDYLLAFLVTLGCSVFILYPAGTDMSPYGRGRENTVWGILLMLGYLGCDGFTSTFQDKLFRGYDMEI HNQIFYTTLCSCILSLTGLILQGHLLPAVEFVSSHSDCFFDIALLSTVATASQFFISYTIRTFGALTFAIIMTTRQLVSI LLSCVWFSHPLSWEQWIGAVRLTFTLFKQTGYVWISMVASANGLSTHFKTKLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 95 | 95 | - | – | |
| PANTHER | 1 | 80 | 80 | 1.9E-148 | – | |
| PANTHER | 1 | 80 | 80 | 1.9E-148 | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| TMHMM | 64 | 86 | 23 | - | – | |
| Pfam | 81 | 264 | 184 | 1.4E-53 | ||
| PANTHER | 81 | 268 | 188 | 1.9E-148 | – | |
| PANTHER | 81 | 268 | 188 | 1.9E-148 | – | |
| Phobius | 96 | 115 | 20 | - | – | |
| TMHMM | 96 | 115 | 20 | - | – | |
| Phobius | 116 | 126 | 11 | - | – | |
| Phobius | 127 | 144 | 18 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| Phobius | 145 | 163 | 19 | - | – | |
| Phobius | 164 | 187 | 24 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 188 | 198 | 11 | - | – | |
| TMHMM | 198 | 220 | 23 | - | – | |
| Phobius | 199 | 218 | 20 | - | – | |
| Phobius | 219 | 224 | 6 | - | – | |
| Phobius | 225 | 249 | 25 | - | – | |
| TMHMM | 225 | 247 | 23 | - | – | |
| Phobius | 250 | 268 | 19 | - | – | |
| Phobius | 269 | 288 | 20 | - | – | |
| Phobius | 289 | 293 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0368600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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