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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0368600 |
| Transcript ID | LotjaGi2g1v0368600.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP galactose transporter-related protein; TAIR: AT5G59740.1 UDP-N-acetylglucosamine (UAA) transporter family; Swiss-Prot: sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B; TrEMBL-Plants: tr|A0A151TM63|A0A151TM63_CAJCA Adenosine 3'-phospho 5'-phosphosulfate transporter 1; Found in the gene: LotjaGi2g1v0368600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86613028..86617264) extracted from Lotus japonicus Gifu genome v1.2.
ACTTCACCATCTTCTTCTTCATCTTCATCTTCACCGGATTGGAAATGGAGACAGAGCAAGCTATGGAAAGGCACATTCGC CGTCACCGGAATCATGCTCACCCTCGTTACCTATGGCGTCTTGCAGGTTCATCCATCAATTTTTCTCTTCCATTTTTCCA TTTCTTAGAATCCCCTTACACTGCTTAATTTGCAATTGCAATGGTTCTGTTCCTTTTTGCAAATAGAGTACAGTTATTTA TGATTATTTGGTATTTGTTTGTTTCAGGAAAAGATCATGAGAGTGCCATATGGAGTGAACAAGGATTACTTCAAATATTC TCTCTTTCTTGTTTTCTGCAACCGTATCACAACCTCAGCTGTTTCTGCTGGTGCTTTACTGGTAACTAAGTAGTACAAAT TGCCATGGTTAATTTTCACACATTTTATAGCATGTTCGGATTAGCTTGTAATTTCTCAAAATCAATTCTAACACTAAGAA GCTACTCGCAGAAGCTTCTTTCACCGAACTAATTTTGGTTTTAGAATTAGTTGTTGAAGAATTTCCAAACATGCACTTAC TGTTTGATTTTTTCCCGTGGTAATAAAATTTCGACATTACCTGAATCCATTATCATTAGTGACTTGACTTGGTGTTTGAA ATGACAACCTTTGTTTCTTATGTCTGCATTGCATTTGCTAAGCCAGAATTTTCCTCAAATTTATTATTTTTAAACTTTCG AACAGGCAAGTAATAAAGCATTGGATCCAGTAGCTCCTATTTATACGTATTGCCTTGTGTCAGTATCAAACATACTTACC ACAACTTGTCAGTATGAGGTAAGCTGCTGCATACATGCCTGTGATAATATGTTCATTGGTGTTGATATTATTATTGGCAG GAAGTTGATACCTGTGTTTTCTTTATGATCATATGTCTTTCTCCAGGCTCTCAAATATGTCAGTTTCCCTGTTCAGACTC TTGCAAAATGCGCTAAAATGATACCTGTTATGGTAGGTCAAACTTTAGTACTTGCCTTATTATATCGGTATTCCTAACCT ATGCAATATTACATAGAATAAGAATATAAAAGTGAAATGCTTTTATTGAAGAAGAAATCATTTATACATCAGAATTACAA ATATACTTTTTTCCCATAAAAGTTTTGATTTTTCTTGTCTTAGCTTATGCAGTGTTGCATAAGTTAGACTTGAAAAAACC TTCTTTTGTTCAGATAATTATGATCATTTTCTGTTTGCTATATTCATTACACATTGTTGATATTCATATATTAATTTGTA GCTTATTTTTCATCTTCTCTCAGTCACCGTTGGTTGCTTCAAGGAATTGAAGTAACTACATTGTATTGTTCTTTTACACT GAATGCGTAATGCTTTCTCTCTCTCTTCACAATCATGTGTAATCGGTATATTATTGGCCCCTTCCTTCCTGAAAACAATG TCTATGAAGAGTAAAAAAATCAACTTACATGGTTTATTCCTTCCATACTTATGATATTGCAGGTTAAGATGGATTGATGT GATTCCTTCTCGTACATTGAATCTTAATTTCTGTCTTCGAATATTATATAGGTTTGGGGCACTCTCATAATGCAGAAGAG ATACAAGGGACCTGACTATTTATTAGCCTTTTTAGTAACCCTTGGATGCTCAGTATTCATTTTATATCCGGTGATTATTT TGTCTTTAACCCTAGTTCTTTTTTTCTTTTTCATCAATCTTTTTGTTTGTAATTCTTTTCTATTTAGAATCAACAATGAA TGTCGATATGCTACCATATTAGGCTTATTCAGTGTTGGTTTTAAGAAGGCTATTTGCACTATTATGTTCCTAAGCAGGAA GTTCTAAATTGACCCTGAAAAAGTTTTCAAATTCTTTCTCTATTTAAATGTACCAAAGTAAATAAAGCATGGTTCAAACT TATTGATTTGAATTTGACAATTACAAATCCACCCCATTTCTTTGATAAATTGATATCTAACTTAGGATCCACCACACACA GACTTTTGAAAAAATTGAGTAATTAACTGCAGACTTGCCATTCAGAATATATTCTTATAGCAATTGATAAGTTCCCGTTT GTGACATGCTGTTATCTCATCTTCCATTTAATAGTATGTTATCAGATTATTACATTCTTAAGATTGATTAATCAATGCCA TTGAAGATGATGCACAATGTCCTTGATTATCTGGCAGCATTCTGTACTAAACTAATGTAATTCTTGTGTGTTGTCGTTGT AGGCAGGAACTGACATGAGTCCATATGGAAGGGGAAGGGAAAATACTGTTTGGGGTATTCTCTTGATGCTTGGTTATCTT GGGTATCACTACAAAACTCAATCCATCTTTCTATGATAAGTGATTTTACGTATTATCTTAAACAAACAAACAAAAAAAAC CCTCTAAATTCAGTGCTACTTCACTCATTATGACATGTAAGGTTTTTAATATTTCAAACTATTTTCGTTTGAGGTTCAGA ATACCTTGCCTTCCTGCAGATGTTTTGTGAAGACCTATGTAATTATTTTAAATTAGTTTTTATGTTGATTTGAGGAGCAT TTGTTATTCAAAACCATGTTATATGATTAAAATCTTATTTTGCAACACTTTGCAGTTTGTACATTCTTGCACATTCTTAA ATGCACAAGTTGATGCTAACATTACTAGTTTTATCCTTTTTGCCAATTTACTTTAAGAATTTAAATTAATATAAAAAAAA TCAAGTGCTAGTCTTTCTTTGAATCACATACCAAGTTTTTTTCCCCAATAGGTGTGATGGCTTTACAAGCACATTCCAAG ATAAGCTGTTCAGAGGCTATGACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGTATTCTTAGCCTG ACAGGTTAGTTTCAGGCAGTGAAATTTTAGGTTGAATGTTATATTTTTGTCATATTTAGTTTAGGCAGTGTAAATTCTTT TCTTCAGTGAGAATTCTCTTGGACTTTTACACGTACATGTTTATTAAAATATTGGTTCAGAATGAGAGAAAAGAGTGATA TTTTTTAGAAAATCATTAACAACCTGTAATAAACTTTTAACTGCACTAACAAACTCTTCAATTCACTCTTCTCCTAACAC AAACCCTAACAACTTGTTTCTTTTCCAGCTTTGTGGTTGGAAATCTTTTGATGTTTTTTATTCAGGTCTTATCTTACAGG GACATTTATTACCAGCAGTTGAGTTTGTTTCTAGCCACAGTGATTGCTTCTTTGACATAGCATTGCTTTCAACTGTAAGG GAATTTGCCCTTCTGCTTCAATTTTTATAATACATTATTGATAACCTGCTCTTCTTTTCTGATTGTTTTGATGAAGTTTT GAAACCTATAATGCTTTTTCTCTGTTAGAGCAGCTAGTCGTGCAGGGCCTTTGGTGCAAGATGGCGTAGGGCCCAAAGAG TGGAAGGTTTATTCTAGAAGGGGAAAAGGGAATCTCCAGGTGGATAACTAATTCCCTAACTTTCAGGAAGAGAGAGAGCC AACGATTGTAATAGGACTTTACTATAAGAAGGTAGTTAGAGGAGGGTCGAGGGGTATCTTATTTTGATAGCTGTGTAAGG AAATGGATAGGAAGCAATAAGCTTCCTATTAGGAGCTGAGCTCTTGTCAGATTTAGGGAACCATTCCCCTTCTCTGTAAT TTACCAAGTATAATTCAATAAGCAATCATTTCAGTTTCAGTTCATTTACCTCTATTCTGTGTTTGAGACCATTGTTAGGA AATCGATTCCTAACATTCTCCTTCCTTTTTGGAAAAATAAAAAACACTCCCACTTTTTCATCTTCCATTTCACTGAACAG ATTTTGTATAATATCAATTTCCACAGGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGTACTTTTGGTGCT CTAACATTTGCTATTATAATGACAACAAGACAGGTAACCATTGCATAAAAATGGCAAAATTTATACTATCCTTTCCATTA TTCTTTTTATCAGTGTTTTTCATATTTTGTTCTAATTGCTGCAGTTGGTGAGCATTCTACTATCATGTGTGTGGTTTTCA CATCCTCTTAGCTGGGAACAATGGATTGGAGCGGTAAGACTTACTTTTACCCTTTTTAAACAGACTGGCTATGTTTGGAT ATCCATGGTCGCCAGTGCAAACGGACTAAGCACACACTTCAAGACAAAACTTGAATGAAACTCTTCTTATAGATTGA
CDS sequence (LotjaGi2g1v0368600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCACCCTCGTTACCTATGGCGTCTTGCAGGAAAAGATCATGAGAGTGCCATATGGAGTGAACAAGGATTACTTCAA ATATTCTCTCTTTCTTGTTTTCTGCAACCGTATCACAACCTCAGCTGTTTCTGCTGGTGCTTTACTGGCAAGTAATAAAG CATTGGATCCAGTAGCTCCTATTTATACGTATTGCCTTGTGTCAGTATCAAACATACTTACCACAACTTGTCAGTATGAG GCTCTCAAATATGTCAGTTTCCCTGTTCAGACTCTTGCAAAATGCGCTAAAATGATACCTGTTATGGTTTGGGGCACTCT CATAATGCAGAAGAGATACAAGGGACCTGACTATTTATTAGCCTTTTTAGTAACCCTTGGATGCTCAGTATTCATTTTAT ATCCGGCAGGAACTGACATGAGTCCATATGGAAGGGGAAGGGAAAATACTGTTTGGGGTATTCTCTTGATGCTTGGTTAT CTTGGGTGTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTCAGAGGCTATGACATGGAGATACATAATCAGATATT CTATACTACTTTGTGTTCTTGTATTCTTAGCCTGACAGGTCTTATCTTACAGGGACATTTATTACCAGCAGTTGAGTTTG TTTCTAGCCACAGTGATTGCTTCTTTGACATAGCATTGCTTTCAACTGTTGCAACAGCTAGTCAATTTTTTATTTCCTAC ACAATTCGTACTTTTGGTGCTCTAACATTTGCTATTATAATGACAACAAGACAGTTGGTGAGCATTCTACTATCATGTGT GTGGTTTTCACATCCTCTTAGCTGGGAACAATGGATTGGAGCGGTAAGACTTACTTTTACCCTTTTTAAACAGACTGGCT ATGTTTGGATATCCATGGTCGCCAGTGCAAACGGACTAAGCACACACTTCAAGACAAAACTTGAATGA
Protein sequence (LotjaGi2g1v0368600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALLASNKALDPVAPIYTYCLVSVSNILTTTCQYE ALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKRYKGPDYLLAFLVTLGCSVFILYPAGTDMSPYGRGRENTVWGILLMLGY LGCDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLLPAVEFVSSHSDCFFDIALLSTVATASQFFISY TIRTFGALTFAIIMTTRQLVSILLSCVWFSHPLSWEQWIGAVRLTFTLFKQTGYVWISMVASANGLSTHFKTKLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 290 | 290 | 4.8E-173 | – | |
| Phobius | 1 | 117 | 117 | - | – | |
| PANTHER | 1 | 290 | 290 | 4.8E-173 | – | |
| Pfam | 2 | 286 | 285 | 1.7E-80 | ||
| Phobius | 118 | 137 | 20 | - | – | |
| TMHMM | 118 | 136 | 19 | - | – | |
| Phobius | 138 | 148 | 11 | - | – | |
| Phobius | 149 | 166 | 18 | - | – | |
| TMHMM | 151 | 170 | 20 | - | – | |
| Phobius | 167 | 185 | 19 | - | – | |
| Phobius | 186 | 209 | 24 | - | – | |
| TMHMM | 186 | 208 | 23 | - | – | |
| Phobius | 210 | 220 | 11 | - | – | |
| Phobius | 221 | 240 | 20 | - | – | |
| TMHMM | 231 | 253 | 23 | - | – | |
| Phobius | 241 | 246 | 6 | - | – | |
| Phobius | 247 | 271 | 25 | - | – | |
| Phobius | 272 | 290 | 19 | - | – | |
| Phobius | 291 | 310 | 20 | - | – | |
| Phobius | 311 | 315 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0368600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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