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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0368600 |
| Transcript ID | LotjaGi2g1v0368600.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP galactose transporter-related protein; TAIR: AT5G59740.1 UDP-N-acetylglucosamine (UAA) transporter family; Swiss-Prot: sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B; TrEMBL-Plants: tr|I1LQU6|I1LQU6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0368600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86613031..86617276) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGAAACAACTTCACCATCTTCTTCTTCATCTTCATCTTCACCGGATTGGAAATGGAGACAGAGCAAGCTATGGAA AGGCACATTCGCCGTCACCGGAATCATGCTCACCCTCGTTACCTATGGCGTCTTGCAGGTTCATCCATCAATTTTTCTCT TCCATTTTTCCATTTCTTAGAATCCCCTTACACTGCTTAATTTGCAATTGCAATGGTTCTGTTCCTTTTTGCAAATAGAG TACAGTTATTTATGATTATTTGGTATTTGTTTGTTTCAGGAAAAGATCATGAGAGTGCCATATGGAGTGAACAAGGATTA CTTCAAATATTCTCTCTTTCTTGTTTTCTGCAACCGTATCACAACCTCAGCTGTTTCTGCTGGTGCTTTACTGGTAACTA AGTAGTACAAATTGCCATGGTTAATTTTCACACATTTTATAGCATGTTCGGATTAGCTTGTAATTTCTCAAAATCAATTC TAACACTAAGAAGCTACTCGCAGAAGCTTCTTTCACCGAACTAATTTTGGTTTTAGAATTAGTTGTTGAAGAATTTCCAA ACATGCACTTACTGTTTGATTTTTTCCCGTGGTAATAAAATTTCGACATTACCTGAATCCATTATCATTAGTGACTTGAC TTGGTGTTTGAAATGACAACCTTTGTTTCTTATGTCTGCATTGCATTTGCTAAGCCAGAATTTTCCTCAAATTTATTATT TTTAAACTTTCGAACAGGCAAGTAATAAAGCATTGGATCCAGTAGCTCCTATTTATACGTATTGCCTTGTGTCAGTATCA AACATACTTACCACAACTTGTCAGTATGAGGTAAGCTGCTGCATACATGCCTGTGATAATATGTTCATTGGTGTTGATAT TATTATTGGCAGGAAGTTGATACCTGTGTTTTCTTTATGATCATATGTCTTTCTCCAGGCTCTCAAATATGTCAGTTTCC CTGTTCAGACTCTTGCAAAATGCGCTAAAATGATACCTGTTATGGTAGGTCAAACTTTAGTACTTGCCTTATTATATCGG TATTCCTAACCTATGCAATATTACATAGAATAAGAATATAAAAGTGAAATGCTTTTATTGAAGAAGAAATCATTTATACA TCAGAATTACAAATATACTTTTTTCCCATAAAAGTTTTGATTTTTCTTGTCTTAGCTTATGCAGTGTTGCATAAGTTAGA CTTGAAAAAACCTTCTTTTGTTCAGATAATTATGATCATTTTCTGTTTGCTATATTCATTACACATTGTTGATATTCATA TATTAATTTGTAGCTTATTTTTCATCTTCTCTCAGTCACCGTTGGTTGCTTCAAGGAATTGAAGTAACTACATTGTATTG TTCTTTTACACTGAATGCGTAATGCTTTCTCTCTCTCTTCACAATCATGTGTAATCGGTATATTATTGGCCCCTTCCTTC CTGAAAACAATGTCTATGAAGAGTAAAAAAATCAACTTACATGGTTTATTCCTTCCATACTTATGATATTGCAGGTTAAG ATGGATTGATGTGATTCCTTCTCGTACATTGAATCTTAATTTCTGTCTTCGAATATTATATAGGTTTGGGGCACTCTCAT AATGCAGAAGAGATACAAGGGACCTGACTATTTATTAGCCTTTTTAGTAACCCTTGGATGCTCAGTATTCATTTTATATC CGGTGATTATTTTGTCTTTAACCCTAGTTCTTTTTTTCTTTTTCATCAATCTTTTTGTTTGTAATTCTTTTCTATTTAGA ATCAACAATGAATGTCGATATGCTACCATATTAGGCTTATTCAGTGTTGGTTTTAAGAAGGCTATTTGCACTATTATGTT CCTAAGCAGGAAGTTCTAAATTGACCCTGAAAAAGTTTTCAAATTCTTTCTCTATTTAAATGTACCAAAGTAAATAAAGC ATGGTTCAAACTTATTGATTTGAATTTGACAATTACAAATCCACCCCATTTCTTTGATAAATTGATATCTAACTTAGGAT CCACCACACACAGACTTTTGAAAAAATTGAGTAATTAACTGCAGACTTGCCATTCAGAATATATTCTTATAGCAATTGAT AAGTTCCCGTTTGTGACATGCTGTTATCTCATCTTCCATTTAATAGTATGTTATCAGATTATTACATTCTTAAGATTGAT TAATCAATGCCATTGAAGATGATGCACAATGTCCTTGATTATCTGGCAGCATTCTGTACTAAACTAATGTAATTCTTGTG TGTTGTCGTTGTAGGCAGGAACTGACATGAGTCCATATGGAAGGGGAAGGGAAAATACTGTTTGGGGTATTCTCTTGATG CTTGGTTATCTTGGGTATCACTACAAAACTCAATCCATCTTTCTATGATAAGTGATTTTACGTATTATCTTAAACAAACA AACAAAAAAAACCCTCTAAATTCAGTGCTACTTCACTCATTATGACATGTAAGGTTTTTAATATTTCAAACTATTTTCGT TTGAGGTTCAGAATACCTTGCCTTCCTGCAGATGTTTTGTGAAGACCTATGTAATTATTTTAAATTAGTTTTTATGTTGA TTTGAGGAGCATTTGTTATTCAAAACCATGTTATATGATTAAAATCTTATTTTGCAACACTTTGCAGTTTGTACATTCTT GCACATTCTTAAATGCACAAGTTGATGCTAACATTACTAGTTTTATCCTTTTTGCCAATTTACTTTAAGAATTTAAATTA ATATAAAAAAAATCAAGTGCTAGTCTTTCTTTGAATCACATACCAAGTTTTTTTCCCCAATAGGTGTGATGGCTTTACAA GCACATTCCAAGATAAGCTGTTCAGAGGCTATGACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGT ATTCTTAGCCTGACAGGTTAGTTTCAGGCAGTGAAATTTTAGGTTGAATGTTATATTTTTGTCATATTTAGTTTAGGCAG TGTAAATTCTTTTCTTCAGTGAGAATTCTCTTGGACTTTTACACGTACATGTTTATTAAAATATTGGTTCAGAATGAGAG AAAAGAGTGATATTTTTTAGAAAATCATTAACAACCTGTAATAAACTTTTAACTGCACTAACAAACTCTTCAATTCACTC TTCTCCTAACACAAACCCTAACAACTTGTTTCTTTTCCAGCTTTGTGGTTGGAAATCTTTTGATGTTTTTTATTCAGGTC TTATCTTACAGGGACATTTATTACCAGCAGTTGAGTTTGTTTCTAGCCACAGTGATTGCTTCTTTGACATAGCATTGCTT TCAACTGTAAGGGAATTTGCCCTTCTGCTTCAATTTTTATAATACATTATTGATAACCTGCTCTTCTTTTCTGATTGTTT TGATGAAGTTTTGAAACCTATAATGCTTTTTCTCTGTTAGAGCAGCTAGTCGTGCAGGGCCTTTGGTGCAAGATGGCGTA GGGCCCAAAGAGTGGAAGGTTTATTCTAGAAGGGGAAAAGGGAATCTCCAGGTGGATAACTAATTCCCTAACTTTCAGGA AGAGAGAGAGCCAACGATTGTAATAGGACTTTACTATAAGAAGGTAGTTAGAGGAGGGTCGAGGGGTATCTTATTTTGAT AGCTGTGTAAGGAAATGGATAGGAAGCAATAAGCTTCCTATTAGGAGCTGAGCTCTTGTCAGATTTAGGGAACCATTCCC CTTCTCTGTAATTTACCAAGTATAATTCAATAAGCAATCATTTCAGTTTCAGTTCATTTACCTCTATTCTGTGTTTGAGA CCATTGTTAGGAAATCGATTCCTAACATTCTCCTTCCTTTTTGGAAAAATAAAAAACACTCCCACTTTTTCATCTTCCAT TTCACTGAACAGATTTTGTATAATATCAATTTCCACAGGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGT ACTTTTGGTGCTCTAACATTTGCTATTATAATGACAACAAGACAGGTAACCATTGCATAAAAATGGCAAAATTTATACTA TCCTTTCCATTATTCTTTTTATCAGTGTTTTTCATATTTTGTTCTAATTGCTGCAGTTGGTGAGCATTCTACTATCATGT GTGTGGTTTTCACATCCTCTTAGCTGGGAACAATGGATTGGAGCGGTAAGACTTACTTTTACCCTTTTTAAACAGACTGG CTATGTTTGGATATCCATGGTCGCCAGTGCAAACGGACTAAGCACACACTTCAAGACAAAACTTGAATGAAACTCTTCTT ATAGAT
CDS sequence (LotjaGi2g1v0368600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAACAACTTCACCATCTTCTTCTTCATCTTCATCTTCACCGGATTGGAAATGGAGACAGAGCAAGCTATGGAA AGGCACATTCGCCGTCACCGGAATCATGCTCACCCTCGTTACCTATGGCGTCTTGCAGGAAAAGATCATGAGAGTGCCAT ATGGAGTGAACAAGGATTACTTCAAATATTCTCTCTTTCTTGTTTTCTGCAACCGTATCACAACCTCAGCTGTTTCTGCT GGTGCTTTACTGGCAAGTAATAAAGCATTGGATCCAGTAGCTCCTATTTATACGTATTGCCTTGTGTCAGTATCAAACAT ACTTACCACAACTTGTCAGTATGAGGCTCTCAAATATGTCAGTTTCCCTGTTCAGACTCTTGCAAAATGCGCTAAAATGA TACCTGTTATGGCAGGAACTGACATGAGTCCATATGGAAGGGGAAGGGAAAATACTGTTTGGGGTATTCTCTTGATGCTT GGTTATCTTGGGTGTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTCAGAGGCTATGACATGGAGATACATAATCA GATATTCTATACTACTTTGTGTTCTTGTATTCTTAGCCTGACAGGTCTTATCTTACAGGGACATTTATTACCAGCAGTTG AGTTTGTTTCTAGCCACAGTGATTGCTTCTTTGACATAGCATTGCTTTCAACTGTTGCAACAGCTAGTCAATTTTTTATT TCCTACACAATTCGTACTTTTGGTGCTCTAACATTTGCTATTATAATGACAACAAGACAGTTGGTGAGCATTCTACTATC ATGTGTGTGGTTTTCACATCCTCTTAGCTGGGAACAATGGATTGGAGCGGTAAGACTTACTTTTACCCTTTTTAAACAGA CTGGCTATGTTTGGATATCCATGGTCGCCAGTGCAAACGGACTAAGCACACACTTCAAGACAAAACTTGAATGA
Protein sequence (LotjaGi2g1v0368600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAETTSPSSSSSSSSPDWKWRQSKLWKGTFAVTGIMLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSA GALLASNKALDPVAPIYTYCLVSVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMAGTDMSPYGRGRENTVWGILLML GYLGCDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLLPAVEFVSSHSDCFFDIALLSTVATASQFFI SYTIRTFGALTFAIIMTTRQLVSILLSCVWFSHPLSWEQWIGAVRLTFTLFKQTGYVWISMVASANGLSTHFKTKLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 22 | 138 | 117 | 6.1E-149 | – | |
| PANTHER | 22 | 138 | 117 | 6.1E-149 | – | |
| Phobius | 25 | 45 | 21 | - | – | |
| TMHMM | 28 | 45 | 18 | - | – | |
| Pfam | 29 | 139 | 111 | 6.0E-23 | ||
| Phobius | 46 | 151 | 106 | - | – | |
| PANTHER | 138 | 292 | 155 | 6.1E-149 | – | |
| PANTHER | 138 | 292 | 155 | 6.1E-149 | – | |
| Pfam | 147 | 288 | 142 | 1.1E-39 | ||
| TMHMM | 151 | 173 | 23 | - | – | |
| Phobius | 152 | 169 | 18 | - | – | |
| Phobius | 170 | 188 | 19 | - | – | |
| TMHMM | 188 | 210 | 23 | - | – | |
| Phobius | 189 | 210 | 22 | - | – | |
| Phobius | 211 | 221 | 11 | - | – | |
| TMHMM | 222 | 244 | 23 | - | – | |
| Phobius | 222 | 244 | 23 | - | – | |
| Phobius | 245 | 249 | 5 | - | – | |
| TMHMM | 249 | 271 | 23 | - | – | |
| Phobius | 250 | 271 | 22 | - | – | |
| Phobius | 272 | 317 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0368600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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