Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0371700 |
| Transcript ID | LotjaGi2g1v0371700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pathogenesis-related thaumatin family protein; TAIR: AT2G28790.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q41350|OLP1_SOLLC Osmotin-like protein; TrEMBL-Plants: tr|A0A151TME4|A0A151TME4_CAJCA Osmotin-like protein; Found in the gene: LotjaGi2g1v0371700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86839264..86843956) extracted from Lotus japonicus Gifu genome v1.2.
ATTTAGTTTAGTTAAAGTGGATTTCATTTAATATAATAATTTATGTTTGAATACTTTTATAAAAATATTAATTTTAAAAA ATGTCATATAAATAAAACTACCAGAAAGTGAAATTATGGCGTAAAAGCAATGGACTACTTGTTTGAGAAAACTGATTTGA ATAAAACTAAATTGAAAGCAAAAGCATCACTTAAGGTTTAAAAGTGCATTTTAGGCATATTCAAATTGAAAGAAACAAAA TTTCAATCAAGTTGGCACAAAGTTAACAAAAACTGAAAATGAGTTTTCTCCACCAATTTTTATTAAGATAGATGAAATTC ATATGGGTAATGATATATACACACCTCACTTTCTCTTCCATCTCATTTTCACCTATTTTTCTTCCTATCTCACACTGCAT TTCCTATCACATCACAAATCATATCATTCATTTCTCTCTAATTTCTACTTAACCTCATAAGGTGAAGGTGAAATTGGTAT GTGAATTAAACATTATTCAATTCACATATATGTTTCAGCTTAACACCAAAACAAACTTCCACCACCTAGAGAAAAGAGTT TTCCTGACCATGCCATTAGTATTAGACAACTTTACCCATCTCCATGGACCATGATGATCCTTTATTTTGCTCTAGAATAC TCAAAATGTATTATCTTACCTATAAATAACACTCATACCAATATTCATCACACAACACATCAAAGTCCCAAAAGCAAAGA GCTAGCAGCAACAATGCCAATGGCTCCTCCTTCTTCACTTCTCATATCCTGCTTCCTCATTCTCACCATCACCACCCACC TCACACCTTCACATGCCCTCTTCCTAACCCTCGTCAACAACTGCAAATACACCGTCTGGCCCGGCATCCAGCCCAACGCC GGCCACCCAGTCCTCGCCGGCGGCGGCTTCGTCCTCAACCCCTTCACCCACCTCTCCATCCCCGTCCCAGACACTCACTG GTCCGGCCGCGTCTGGGCCCGCACCGGCTGCACCTACGCCGCCGGCAACCGCTTCACCTGCGCATCCGGCGACTGCGGCG GCCGTCTCCAGTGCGCCGGCGCCGGCGGTTCCGCCCCAGCCACCCTAGCCCAGTTCGACATGCACCACGGCAACGCCGAC TTCTCCTCCTACTCCGTCAGCCTCGTCGACGGCTTCAACGTCCCCATGACTGTAACCCCTCACGAAGGCAAAGGTGTTTG CCCTGTTGTCGGTTGCCGCTCCGATCTGCTCGCCACGTGTCCACCGGTCCTCCACCACCGTGTGCCGGCGGTTCACGGCC CTGTTGTGGCGTGTAAGAGCGGTTGCGAAGCTTTCCACTCCGATGAGCTTTGCTGCAGGAATCACTTCAACAACGCGCAA ACGTGCAAGCCATCGGTTTACTCAACGTTCTTCAAGCACGCGTGTCCTGCTACGTTCACGTTCGCACACGATACTCCTTC ACTGACGCACGAGTGTTCTTCACCGCGTGAGCTTAAGGTTATCTTCTGCCATTGAAAAAGGACAAGGTTTGGGTCACTGT TTAGCGACCCATTTCCTTCTATTTCTGGTTATTATTCAAATAAAAGCAGTGTGGTTTAAGAAGCTAGCTAGGTTTGATTT TCGTATTGTAATTTTAGTTTATTATCTGTAGTTTAGTTTGTATTGTGGTTTGTGATTTGTTAAGTGTTTGAATGTTGTAC TAGTAGTTTTGATTTGTGGTTTAAGATTTTCGATCCAAGTTTTAATCAATGTGTGTGTGTTTGCATATGTTTTGTATTTT AGTGCAATGTTATTGAGTTCTGGAAGTGGTCATGGAGGAAAAAGGACCAATGCACCTCTTGTTTAGGCTCGTACTTCGAA AATTCGATTGTTTGTGTTTGCTGAGAGCTGTACCGCGCTTGTCACGTGTTGGCTCAACTTTTTATTTACTTTTCACAAAA TTCAATACAATTGATTTTGGTAAGTTTGTTGTCGCTTAGTTAAAAATGTGAGTAATTTAAAGATAAGATCGGGGAATAAG CTTACCAACTTTGTTTTTGAAAATGATATGAAGGATTAGGGTCTAGGGATGAATGTGTCTTATGCTAAATCCAATGTTTT ATTTGAATTAGCTTGGCTGAAAAATTATTTCCAATGGAACCCTTCCAAAAAAAACGCACATGAAGTTAACGTTAACTCAT GATGTTATATTCACATATAGTCAAATATCAAAAAACCTTTTAACTTGCACGAAAAAAAAAATACAAAATCATCACAACAC AGTCACATACATTGTTCTTCGTTGTCCTTCTCCAACATGCTTTACAACCATTGTAGTATTTATTAATGGCTGAATTATTT TACCTCAAACTAAAACTGCATCAACACCGCTTGAGTTGTGACTATTCAATTTTAGTTACCCAATAACTTGGCAAATCGCA GAGGTATTGGCATTTTCTCACTTGGTTTGAGAAATGTTCCTAATCGTCAAAACCCTCACTGCAATGCTAAAAATATGGTT GCCTCTGCGGTGAGACATTTTTAATTACAACAATACCTTTATTTTTTTTCAATTTCCTTTTCATGCCACCAACATCTTCT CCCCTTCTGTCCCAATGACCACCACACGACCCTTTGCAAAATCTCAGCAACCTCACGACCTCCGCCGACTCGCTGTCGCA CCTCACCGTGCTCTTCAACCTCACCCTCATCGCGAAGAATCCCAGCAACCACCTCCTCTAGGAGCCCTTTGTCATCATCG CATTCTCCGATTCCGTGCAAATCGGCAACGGGTCGCTCACGGCTTCGGGTCCGCCAAGAATAACCAGACGAGCCTCCGCA CAGTACTTTCCAGGTAGCAGGATCTAGACACGAAGTCGCTGAGTAGTCTCAGATCAGGGCTGGAGGGGAGGAAGAGGTTC CCGGTGACAATTCAGATGGATACCAAGGTGTGGATGAAGATGGAGGAGTGGCTGAAGAGGAAGCAGTTGGGGATTCGAGT GAGGTGTACCGGAATCAGAGGCACGGTTCCCGACGGTGGCTTACGTTATCAACTATGAATGTAAGGTGGATCTTCGAATC AAGATATGGAAATTCTCCTTTCTCTTTTTTTATTTTATTTTTTAAGTTTCATTCTGTTTTGGGAGTCGGGAAAACGACTT AGCCCCCTGCTGACTGACAAAGGACGAGCACCTTATTAGTTCACGCTCCACTACTTCAGTGGACCAGAAGTTGGGGACTA CTGTTCTGGGAGTCGGGAAAATATCCGACCACCCCCATATGCCCAAGCGGACAACTGCCATGAAGCACCCGACCACGATA TTGAGGCCGAAAATAGGCCCAACCCGACCGCAGTTTCCGAACGATCATCCTTTACCAGGACGAACGTTTAGGAGTCACTC GACCACGGGACAAGACGATCGCGCAACCGACCCCCGCAGTTATGATGAGGATGCTCACGACTTACCACGACGGGGAATGA GGTTCGAATCAACTCAAACATCACATCACTGACCCTACACCCTAGGGCTAAGGATTAGGGTTTAGGCTCGAGGTCTAGTC AGTAGTTACTAGGACACCTGAGCCATAAGATCCCTCGAACCTGCAGGAGCTGCAGACTAATCTAACGAAGGAGAACTGCC CTGATTCTAGGTTCTCATTGCTTATCCTGAGAGATATCTTGATCTCTCTGGCTGATATAAAAGGCCCTTTGCAGCTGGGG GCCAAGGTAACTTATCTTTTCTTAACTCTACTCCAAGCTCTAGCACCTAACCACCTGAACTGACTTAAGCTTCGGAGTGC CTTGCAGGAACCCTCCTGGACTAACTCTCTCTGCTCTAGACCGCTCCTCCCTCGTCCTCGGCTCGACGTTCTCCACACTC CTACTGTTCTCCTCTCTCCTTACCCTTCCTGATAAGTTTGGTCGGATTTCCCCCGGTCACATTCTTTTTTGTTTTCATAA TTGCTTTTTAATTTGTGTTGAGATTTGAGAATATGAAATTTGTATGGACAAAAAACAAAATTGAGAGATTATGGTCGTGG AAGCCGTAAAGTTGGGGTTTTTGGGTGGTAATTGTTGCTACAATTTATTTCAAGGTTTTAATAGTAATGCAACTACATTT TATAACTGGTTTTGAATTCTTGATTGAATCTACCCTTTTCATGCCACTATTATAACTACTTTGACCTCTCATGTAAATAC GTACTTGATACTTGCACTTGCTATTCTGCAACTATTGATTCCCTATCAGATGCCCTCAGTGAGAAGAAACTGGGGATGAA TCTTGAAGTAATGGAATAAAGAGTGTTGAAAAGTGAAGAGGCAACATTATACATACCCTTGCGAGGTGACAGAACAATGT TGTCGCTCCCAATCTTTTGATCCTTTCCTATCAAATCAAGAAACCCATCACTGAATATCAGGTGGGAAATTGTGAATCAG ACCGAGAACCCTAATGTTAGGGTTGGGATTGAGCAGCATTAGCCCCTGACTCGATTGAAACAGAGAGATAAGTGAAAGCA GCGATCAACATGTTTTAGGGATTTCATTCTTGGGCATTGCGAGGCGAGCGAGGAGTAGAGAGGTAGAGCGATTCAGAGTG AGAAAGACAATGAGATGCCACCGGTGGAAGCAATGAACCCACCGCAATAATCCTCTCGATTCTCGGTGGTCGTCGGAGAA GCACTGCACTGCTATGAGTGAGTGAGGAAGAGTAAAGACAGATTTTGTGTGGG
CDS sequence (LotjaGi2g1v0371700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATCCTTTATTTTGCTCTAGAATACTCAAAATGTATTATCTTACCTATAAATAACACTCATACCAATATTCATCA CACAACACATCAAAGTCCCAAAAGCAAAGAGCTAGCAGCAACAATGCCAATGGCTCCTCCTTCTTCACTTCTCATATCCT GCTTCCTCATTCTCACCATCACCACCCACCTCACACCTTCACATGCCCTCTTCCTAACCCTCGTCAACAACTGCAAATAC ACCGTCTGGCCCGGCATCCAGCCCAACGCCGGCCACCCAGTCCTCGCCGGCGGCGGCTTCGTCCTCAACCCCTTCACCCA CCTCTCCATCCCCGTCCCAGACACTCACTGGTCCGGCCGCGTCTGGGCCCGCACCGGCTGCACCTACGCCGCCGGCAACC GCTTCACCTGCGCATCCGGCGACTGCGGCGGCCGTCTCCAGTGCGCCGGCGCCGGCGGTTCCGCCCCAGCCACCCTAGCC CAGTTCGACATGCACCACGGCAACGCCGACTTCTCCTCCTACTCCGTCAGCCTCGTCGACGGCTTCAACGTCCCCATGAC TGTAACCCCTCACGAAGGCAAAGGTGTTTGCCCTGTTGTCGGTTGCCGCTCCGATCTGCTCGCCACGTGTCCACCGGTCC TCCACCACCGTGTGCCGGCGGTTCACGGCCCTGTTGTGGCGTGTAAGAGCGGTTGCGAAGCTTTCCACTCCGATGAGCTT TGCTGCAGGAATCACTTCAACAACGCGCAAACGTGCAAGCCATCGGTTTACTCAACGTTCTTCAAGCACGCGTGTCCTGC TACGTTCACGTTCGCACACGATACTCCTTCACTGACGCACGAGTGTTCTTCACCGCGTGAGCTTAAGGTTATCTTCTGCC ATTGA
Protein sequence (LotjaGi2g1v0371700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMILYFALEYSKCIILPINNTHTNIHHTTHQSPKSKELAATMPMAPPSSLLISCFLILTITTHLTPSHALFLTLVNNCKY TVWPGIQPNAGHPVLAGGGFVLNPFTHLSIPVPDTHWSGRVWARTGCTYAAGNRFTCASGDCGGRLQCAGAGGSAPATLA QFDMHHGNADFSSYSVSLVDGFNVPMTVTPHEGKGVCPVVGCRSDLLATCPPVLHHRVPAVHGPVVACKSGCEAFHSDEL CCRNHFNNAQTCKPSVYSTFFKHACPATFTFAHDTPSLTHECSSPRELKVIFCH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 13 | 294 | 282 | 1.7E-87 | ||
| PANTHER | 59 | 294 | 236 | 1.3E-113 | – | |
| PANTHER | 59 | 294 | 236 | 1.3E-113 | ||
| Gene3D | 71 | 294 | 224 | 6.1E-75 | ||
| SUPERFAMILY | 71 | 293 | 223 | 2.75E-72 | ||
| PRINTS | 71 | 83 | 13 | 3.3E-11 | ||
| CDD | 72 | 293 | 222 | 1.8998E-109 | – | |
| ProSiteProfiles | 72 | 294 | 223 | 42.277 | ||
| SMART | 72 | 294 | 223 | 1.9E-122 | ||
| Pfam | 76 | 293 | 218 | 1.1E-70 | ||
| PRINTS | 120 | 131 | 12 | 3.3E-11 | ||
| PRINTS | 172 | 188 | 17 | 3.3E-11 | ||
| PRINTS | 284 | 293 | 10 | 3.3E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0371700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…