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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR037176
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We have found 28 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.798s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0056700.1
n.a. Thaumatin-like protein; TAIR: AT1G20030.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|M5XTL6|M5XTL6_PRUPE Uncharacterized protein; Found in the gene: LotjaGi1g1v0056700 LjG1.1_chr1 7928172 7929609 -
3 domain predictions
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LotjaGi1g1v0105500.2
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1; TrEMBL-Plants: tr|A0A072V8H5|A0A072V8H5_MEDTR Lectin kinase family protein; Found in the gene: LotjaGi1g1v0105500 LjG1.1_chr1 16291367 16296641 +
3 domain predictions
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LotjaGi1g1v0116100.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT5G02140.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein; TrEMBL-Plants: tr|A0A151R4J0|A0A151R4J0_CAJCA Thaumatin-like protein; Found in the gene: LotjaGi1g1v0116100 LjG1.1_chr1 18243871 18247585 +
3 domain predictions
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LotjaGi1g1v0153600.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G77700.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P28493|PR5_ARATH Pathogenesis-related protein 5; TrEMBL-Plants: tr|G7K8X4|G7K8X4_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi1g1v0153600 LjG1.1_chr1 26707134 26721208 -
3 domain predictions
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LotjaGi1g1v0325400.1
n.a. Thaumatin-like protein; TAIR: AT1G75800.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|G7LB07|G7LB07_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi1g1v0325400 LjG1.1_chr1 77853656 77855777 +
3 domain predictions
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LotjaGi1g1v0429600.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G20030.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I1JT26|I1JT26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0429600 LjG1.1_chr1 92458125 92464037 +
3 domain predictions
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LotjaGi1g1v0685000.1
n.a. Thaumatin-like protein; TAIR: AT1G20030.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|G7L3Y5|G7L3Y5_MEDTR Allergen Pru protein, putative; Found in the gene: LotjaGi1g1v0685000 LjG1.1_chr1 125191101 125192984 -
3 domain predictions
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LotjaGi1g1v0685100.1
n.a. Thaumatin-like protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|I3SS29|I3SS29_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0685100 LjG1.1_chr1 125194796 125195966 -
3 domain predictions
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LotjaGi1g1v0685200.1
n.a. Thaumatin-like protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I3SS29|I3SS29_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0685200 LjG1.1_chr1 125207792 125209261 -
3 domain predictions
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LotjaGi2g1v0254300.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT5G40020.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P50699|TLPH_ARATH Thaumatin-like protein; TrEMBL-Plants: tr|I3RZK9|I3RZK9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0254300 LjG1.1_chr2 72025664 72028327 +
3 domain predictions
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LotjaGi2g1v0371700.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT2G28790.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q41350|OLP1_SOLLC Osmotin-like protein; TrEMBL-Plants: tr|A0A151TME4|A0A151TME4_CAJCA Osmotin-like protein; Found in the gene: LotjaGi2g1v0371700 LjG1.1_chr2 86839264 86843956 -
3 domain predictions
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LotjaGi2g1v0380600.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|A0A1J7GXM7|A0A1J7GXM7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0380600 LjG1.1_chr2 87708839 87711905 -
3 domain predictions
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LotjaGi2g1v0380800.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G36010.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I1LI21|I1LI21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0380800 LjG1.1_chr2 87726341 87728601 -
3 domain predictions
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LotjaGi2g1v0432500.1
n.a. Thaumatin; TAIR: AT4G11650.1 osmotin 34; Swiss-Prot: sp|P50700|OSL3_ARATH Osmotin-like protein OSM34; TrEMBL-Plants: tr|I3SIT2|I3SIT2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0432500 LjG1.1_chr2 92936159 92937755 +
3 domain predictions
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LotjaGi2g1v0438900_LC.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT5G24620.3 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P28493|PR5_ARATH Pathogenesis-related protein 5; TrEMBL-Plants: tr|A0A0R0JGL8|A0A0R0JGL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0438900_LC LjG1.1_chr2 93568630 93569859 -
3 domain predictions
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LotjaGi3g1v0522300.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|A0A151TMT3|A0A151TMT3_CAJCA Thaumatin-like protein 1; Found in the gene: LotjaGi3g1v0522300 LjG1.1_chr3 93923081 93926013 -
3 domain predictions
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LotjaGi3g1v0522400.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38670.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|K7LST4|K7LST4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0522400 LjG1.1_chr3 93938537 93946295 -
3 domain predictions
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LotjaGi3g1v0522400.2
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38670.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|A0A072UM98|A0A072UM98_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi3g1v0522400 LjG1.1_chr3 93939718 93945775 -
3 domain predictions
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LotjaGi4g1v0128700.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G36010.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|G7LC27|G7LC27_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi4g1v0128700 LjG1.1_chr4 18756201 18758250 +
3 domain predictions
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LotjaGi4g1v0128800.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I1JCG6|I1JCG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0128800 LjG1.1_chr4 18798038 18800564 +
3 domain predictions
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LotjaGi4g1v0417500.1
n.a. Thaumatin-like protein; TAIR: AT4G11650.1 osmotin 34; Swiss-Prot: sp|P31110|TLP_ORYSJ Thaumatin-like protein; TrEMBL-Plants: tr|A0A072TVX9|A0A072TVX9_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi4g1v0417500 LjG1.1_chr4 79313694 79314826 +
3 domain predictions
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LotjaGi4g1v0463800.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G18250.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P50699|TLPH_ARATH Thaumatin-like protein; TrEMBL-Plants: tr|A0A1J7FP21|A0A1J7FP21_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0463800 LjG1.1_chr4 83375530 83377008 -
3 domain predictions
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LotjaGi5g1v0005100.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G75800.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|K7M8K8|K7M8K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0005100 LjG1.1_chr5 1158234 1160500 -
3 domain predictions
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LotjaGi5g1v0005100.2
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G20030.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|K7M8K8|K7M8K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0005100 LjG1.1_chr5 1158427 1160392 -
3 domain predictions
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LotjaGi5g1v0019000.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G75030.1 thaumatin-like protein 3; Swiss-Prot: sp|P28493|PR5_ARATH Pathogenesis-related protein 5; TrEMBL-Plants: tr|A0A1J7G7J2|A0A1J7G7J2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0019000 LjG1.1_chr5 3667740 3669247 -
3 domain predictions
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LotjaGi5g1v0085300.1
n.a. Thaumatin-like protein; TAIR: AT1G75800.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|O80327|TLP1_PYRPY Thaumatin-like protein 1; TrEMBL-Plants: tr|I3SCW7|I3SCW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0085300 LjG1.1_chr5 14665086 14666802 +
3 domain predictions
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LotjaGi5g1v0085400_LC.1
n.a. Thaumatin-like protein; TAIR: AT1G75040.1 pathogenesis-related protein 5; Swiss-Prot: sp|O80327|TLP1_PYRPY Thaumatin-like protein 1; TrEMBL-Plants: tr|I3SCW7|I3SCW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0085400_LC LjG1.1_chr5 14682158 14683915 +
3 domain predictions
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LotjaGi6g1v0193800.1
n.a. Thaumatin-like protein; TAIR: AT4G36010.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|A0A072VJ74|A0A072VJ74_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi6g1v0193800 LjG1.1_chr6 49001075 49008725 +
3 domain predictions
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