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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001938
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 58 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.760s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0085069.1
n.a. PREDICTED: osmotin-like protein-like [Glycine max] gi|356542459|ref|XP_003539684.1| chr0 33975031 33975926 -
8 domain predictions
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Lj0g3v0207139.1
n.a. PREDICTED: pathogenesis-related protein 5-like isoform X1 [Cicer arietinum] gi|502153511|ref|XP_004509365.1| chr0 103426746 103428192 +
6 domain predictions
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Lj0g3v0251819.1
n.a. PREDICTED: thaumatin-like protein 1 [Vitis vinifera] gi|225441133|ref|XP_002265852.1| chr0 130596004 130596797 +
9 domain predictions
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Lj0g3v0251839.1
n.a. PREDICTED: thaumatin-like protein 1a-like [Cucumis sativus] gi|449451235|ref|XP_004143367.1| chr0 130603488 130604917 +
8 domain predictions
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Lj0g3v0359829.1
n.a. Thaumatin-like protein [Medicago truncatula] gi|357516215|ref|XP_003628396.1| chr0 189478273 189480596 +
8 domain predictions
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Lj1g3v2184220.1
n.a. PREDICTED: thaumatin-like protein 1-like [Glycine max] gi|356509626|ref|XP_003523547.1| chr1 26290645 26294789 +
9 domain predictions
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Lj1g3v4669290.1
n.a. Thaumatin-like protein [Medicago truncatula] gi|357510835|ref|XP_003625706.1| chr1 55424067 55425344 +
9 domain predictions
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Lj1g3v4669300.1
n.a. Thaumatin-like protein [Medicago truncatula] gi|357510835|ref|XP_003625706.1| chr1 55428413 55428774 +
8 domain predictions
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Lj2g3v0025840.1
n.a. n.a. chr2 506170 510643 +
9 domain predictions
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Lj2g3v1693180.1
n.a. PREDICTED: thaumatin-like protein 1-like [Cicer arietinum] gi|502161378|ref|XP_004512141.1| chr2 26126735 26128357 -
9 domain predictions
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Lj2g3v1694190.1
n.a. PREDICTED: thaumatin-like protein 1-like [Cicer arietinum] gi|502126365|ref|XP_004499280.1| chr2 26135881 26137918 -
9 domain predictions
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Lj2g3v2017460.1
n.a. thaumatin-like protein PR-5b [Cicer arietinum] gi|3549691|emb|CAA09228.1| chr2 30839472 30841013 +
9 domain predictions
 –
Lj2g3v2087750.1
n.a. PREDICTED: pathogenesis-related protein 5-like [Glycine max] gi|356518681|ref|XP_003528007.1| chr2 31338195 31339462 -
7 domain predictions
 –
Lj2g3v2087750.2
n.a. PREDICTED: pathogenesis-related protein 5-like [Glycine max] gi|356518681|ref|XP_003528007.1| chr2 31338461 31339462 -
8 domain predictions
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Lj2g3v2184500.1
n.a. PREDICTED: pathogenesis-related protein 5-like [Glycine max] gi|356551823|ref|XP_003544273.1| chr2 32797811 32799886 +
9 domain predictions
 –
Lj2g3v2315160.1
n.a. PREDICTED: thaumatin-like protein-like [Cicer arietinum] gi|502102722|ref|XP_004492164.1| chr2 33603063 33606702 -
9 domain predictions
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Lj2g3v2974820.1
n.a. PREDICTED: thaumatin-like protein 1-like [Fragaria vesca subsp]. vesca] gi|470123658|ref|XP_004297839.1| chr2 38452298 38453387 +
9 domain predictions
 –
Lj3g3v0478020.1
n.a. PREDICTED: thaumatin-like protein-like, partial [Cicer arietinum] gi|502177968|ref|XP_004516152.1| chr3 5464021 5468044 +
9 domain predictions
 –
Lj3g3v3079190.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum] gi|502088366|ref|XP_004488803.1| chr3 38425495 38426224 +
8 domain predictions
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Lj3g3v3080220.1
n.a. Kinase-like protein [Medicago truncatula] gi|357451711|ref|XP_003596132.1| chr3 38436196 38439501 +
8 domain predictions
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Lj3g3v3188510.1
n.a. PREDICTED: osmotin-like protein-like [Glycine max] gi|356542459|ref|XP_003539684.1| chr3 39302592 39304079 -
9 domain predictions
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Lj3g3v3475680.1
n.a. PREDICTED: thaumatin-like protein 1-like [Cicer arietinum] gi|502144878|ref|XP_004505780.1| chr3 42355046 42357718 -
8 domain predictions
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Lj3g3v3475710.1
n.a. PREDICTED: thaumatin-like protein 1-like [Glycine max] gi|356544810|ref|XP_003540840.1| chr3 42370422 42377672 -
9 domain predictions
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Lj3g3v3475710.2
n.a. PREDICTED: thaumatin-like protein 1-like isoform X1 [Cicer arietinum] gi|502144865|ref|XP_004505776.1| chr3 42370422 42377672 -
8 domain predictions
 –
Lj4g3v1047790.1
n.a. Thaumatin-like protein [Medicago truncatula] gi|357518025|ref|XP_003629301.1| chr4 14918412 14920482 +
9 domain predictions
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Lj4g3v2916530.1
n.a. PREDICTED: thaumatin-like pathogenesis-related protein 4-like [Cicer arietinum] gi|502139400|ref|XP_004503753.1| chr4 38804856 38805815 -
9 domain predictions
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Lj4g3v3114730.1
n.a. PREDICTED: thaumatin-like protein-like [Glycine max] gi|356524682|ref|XP_003530957.1| chr4 42091932 42093249 -
9 domain predictions
 –
Lj5g3v0085110.1
n.a. PREDICTED: pathogenesis-related protein 5-like [Glycine max] gi|356553901|ref|XP_003545289.1| chr5 515244 516625 +
9 domain predictions
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Lj5g3v0670770.1
n.a. PREDICTED: thaumatin-like protein 1-like [Glycine max] gi|356537001|ref|XP_003537020.1| chr5 9835465 9836074 +
7 domain predictions
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Lj5g3v0670830.1
n.a. PREDICTED: thaumatin-like protein 1-like [Glycine max] gi|356537001|ref|XP_003537020.1| chr5 9870971 9871981 +
9 domain predictions
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LotjaGi1g1v0056700.1
n.a. Thaumatin-like protein; TAIR: AT1G20030.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|M5XTL6|M5XTL6_PRUPE Uncharacterized protein; Found in the gene: LotjaGi1g1v0056700 LjG1.1_chr1 7928172 7929609 -
7 domain predictions
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LotjaGi1g1v0105500.2
n.a. Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1; TrEMBL-Plants: tr|A0A072V8H5|A0A072V8H5_MEDTR Lectin kinase family protein; Found in the gene: LotjaGi1g1v0105500 LjG1.1_chr1 16291367 16296641 +
5 domain predictions
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LotjaGi1g1v0116100.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT5G02140.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein; TrEMBL-Plants: tr|A0A151R4J0|A0A151R4J0_CAJCA Thaumatin-like protein; Found in the gene: LotjaGi1g1v0116100 LjG1.1_chr1 18243871 18247585 +
7 domain predictions
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LotjaGi1g1v0153600.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G77700.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P28493|PR5_ARATH Pathogenesis-related protein 5; TrEMBL-Plants: tr|G7K8X4|G7K8X4_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi1g1v0153600 LjG1.1_chr1 26707134 26721208 -
7 domain predictions
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LotjaGi1g1v0325400.1
n.a. Thaumatin-like protein; TAIR: AT1G75800.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|G7LB07|G7LB07_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi1g1v0325400 LjG1.1_chr1 77853656 77855777 +
6 domain predictions
 –
LotjaGi1g1v0429600.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT1G20030.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I1JT26|I1JT26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0429600 LjG1.1_chr1 92458125 92464037 +
7 domain predictions
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LotjaGi1g1v0685000.1
n.a. Thaumatin-like protein; TAIR: AT1G20030.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|G7L3Y5|G7L3Y5_MEDTR Allergen Pru protein, putative; Found in the gene: LotjaGi1g1v0685000 LjG1.1_chr1 125191101 125192984 -
7 domain predictions
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LotjaGi1g1v0685100.1
n.a. Thaumatin-like protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|I3SS29|I3SS29_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0685100 LjG1.1_chr1 125194796 125195966 -
7 domain predictions
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LotjaGi1g1v0685200.1
n.a. Thaumatin-like protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I3SS29|I3SS29_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0685200 LjG1.1_chr1 125207792 125209261 -
7 domain predictions
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LotjaGi2g1v0254300.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT5G40020.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P50699|TLPH_ARATH Thaumatin-like protein; TrEMBL-Plants: tr|I3RZK9|I3RZK9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0254300 LjG1.1_chr2 72025664 72028327 +
7 domain predictions
 –
LotjaGi2g1v0371700.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT2G28790.2 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q41350|OLP1_SOLLC Osmotin-like protein; TrEMBL-Plants: tr|A0A151TME4|A0A151TME4_CAJCA Osmotin-like protein; Found in the gene: LotjaGi2g1v0371700 LjG1.1_chr2 86839264 86843956 -
7 domain predictions
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LotjaGi2g1v0380600.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|A0A1J7GXM7|A0A1J7GXM7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0380600 LjG1.1_chr2 87708839 87711905 -
6 domain predictions
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LotjaGi2g1v0380800.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G36010.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I1LI21|I1LI21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0380800 LjG1.1_chr2 87726341 87728601 -
7 domain predictions
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LotjaGi2g1v0432500.1
n.a. Thaumatin; TAIR: AT4G11650.1 osmotin 34; Swiss-Prot: sp|P50700|OSL3_ARATH Osmotin-like protein OSM34; TrEMBL-Plants: tr|I3SIT2|I3SIT2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0432500 LjG1.1_chr2 92936159 92937755 +
7 domain predictions
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LotjaGi2g1v0438900_LC.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT5G24620.3 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P28493|PR5_ARATH Pathogenesis-related protein 5; TrEMBL-Plants: tr|A0A0R0JGL8|A0A0R0JGL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0438900_LC LjG1.1_chr2 93568630 93569859 -
7 domain predictions
 –
LotjaGi3g1v0522300.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|A0A151TMT3|A0A151TMT3_CAJCA Thaumatin-like protein 1; Found in the gene: LotjaGi3g1v0522300 LjG1.1_chr3 93923081 93926013 -
6 domain predictions
 –
LotjaGi3g1v0522400.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38670.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|K7LST4|K7LST4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0522400 LjG1.1_chr3 93938537 93946295 -
7 domain predictions
 –
LotjaGi3g1v0522400.2
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38670.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a; TrEMBL-Plants: tr|A0A072UM98|A0A072UM98_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi3g1v0522400 LjG1.1_chr3 93939718 93945775 -
6 domain predictions
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LotjaGi4g1v0128700.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G36010.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|G7LC27|G7LC27_MEDTR Pathogenesis-related thaumatin family protein; Found in the gene: LotjaGi4g1v0128700 LjG1.1_chr4 18756201 18758250 +
7 domain predictions
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LotjaGi4g1v0128800.1
n.a. Pathogenesis-related thaumatin family protein; TAIR: AT4G38660.1 Pathogenesis-related thaumatin superfamily protein; Swiss-Prot: sp|P83332|TLP1_PRUPE Thaumatin-like protein 1; TrEMBL-Plants: tr|I1JCG6|I1JCG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0128800 LjG1.1_chr4 18798038 18800564 +
7 domain predictions
 –