Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0375100 |
| Transcript ID | LotjaGi2g1v0375100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Scarecrow transcription factor family protein; TAIR: AT2G29060.2 GRAS family transcription factor; Swiss-Prot: sp|P0C883|SCL33_ARATH Scarecrow-like protein 33; TrEMBL-Plants: tr|G7JUT6|G7JUT6_MEDTR GRAS family transcription factor; Found in the gene: LotjaGi2g1v0375100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87236690..87246725) extracted from Lotus japonicus Gifu genome v1.2.
AGGCAACGGTCAACGCCATTACACAAGATTGTCTCTCACCGTCATCTCATCTCTCTTTCTTCTTCTCGGATCTTACTTAA AATAGTGATGATATTTGAATATTATAAATAATACATATAGATATCTAACTAACACCTCAGTTTTCTCTCTATCACACTCT TCTTATCACTTCAATTTTTTCCATATTGAATCTTCTTTTCTCACTTTTAATATCGGCTAAATGTCTGAATTATATGTCTA CAATGATTTTCCTTCTTAAAATGAATGAACAATAATTCAGGGTTAGCTGAATTCAAACCTATCTCACCACAATATCTAAT TATTTAATATTATTCTCTCCCATAGTTCCATTTTCTTGTATGTTAATGCTTTCTCTAACGAAGCATTCATTGAGTATCTG AGTTGGGTATTGGTGACTGTTTCTGAAAAAAGAAAGGAAGATGGATCCAATCTTTTCTGGGGCCAGCGATTTCACAAACG GATACCAGTTTTGTGAAGAAGGGAGCATATTTGTCGCGGATCCAAATCCATATGCAGAATACTGGGATGTGTTTCATCAA CATGGGAACCTCTTAGATGTTGAACCCCTTGGTTTTGCAGCAAATACGAGCCCTGTACAAGGTTCTGTGACATCCATGTC CATGAACTCTGTGACAGATCCTTCTCTGGAAGACACTGACTTCTCAGAAACCACCAAGTTCATAAGCCAAATCCTGATGG AAGAGAACCTTGAACAGGGTCCATTTTATGACTCCCTGGACCTGCAACTCACAGAGAAATCATTCCATGATGCTCTCATA GACAACAACTCATCTCTATCGCCTAATCAACACCCCTTAGATGTTCAAAGCCCTTACGGTGAAACCACTAGCAGTGACAG TGACAACAACAGCAATTTACACTACAATTCTTGTGAGTTGAATCCCCCTCCTCTTGATACCCCAGTAGCTGTTATTGGTG ATCATGCTTTTCAGCTTAACTCTCATGGACTGCTAGACTTGGATTCTTCTGTTACCAATCAATTGGCACAAAATATTTTC AGTCATGCAGATTCTGTCTCCCAATTTAGGAGAGGATTAGAGGAAGCTACCAAGTTTCTTCTTCCTCCAGAACCCCAGAT TGTGACTGGTGTAGGGTCATGTGGAGAATCATCGGATACAGTTGCAGAGAATTCATTTGGTTTAAAGGGTAGTAGAAAGA ATCGTGAGCGTGGAGAAAGTGATTTTGAGGAAGAAAAGAGAAGTAACAAGCAATCAGCAGTTGGTGTTGTTGATGAGGTG GATGACTTATCTGATATGTTTGATCGAGTGCTGGTTCATATGGAACAATTGCCACTTGGTAATGAACACGGTTCCCGAGA GAGTGGCGCAGCAAAAGAGATGCAGCAAGGTGAAAAGACACCATCATCTGATGGAGGGAAGGCTCATCCAAAGAAACAAG GCAGGAAGAAAGAAACAGTGGATTTGAGGGCACTTCTGCTTCTTTGTGCACAAGCTATTCATACCAATGACAACAGGGGC GCTAGTGAACTTCTAAAGCAGATAAGGCAGCATTCTTCTCCCTTTGGTGATGGGTCACAAAGATTGGCTCATTACTTTGC CAATGGCCTTGAGGCACGCTTGTTTGGGGATGTTACCGGTGCACAATTATTTAATTCTACTCCTACCCACAAGACAACCT CTGCTGATGATTTCTTAAAAGGTTACCAAGTTTATCTATCTCCTAACCCAAGCAGAAAGTTTGCACATTTCTATGCTAAC AAAATGATTAAGAAAGCATCTGCAAAAGCTGAAACTCTGCATATTATTGATTTTGGTATCTTATATGGCTTCCAGTGGCC ATTACTCATCAAGTTTTTATCAGAAAGAGAAGGTGGACCTCCGAAGCTGAGGATCACAGGGATAGAGTTCCCTTTACCTG GCTTTCGCCCCACACAAAGGATTGAGGAGACTGGTCGTCGTTTGGCTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAG TACACTGCCATAGCATCACGGAACTGGGAAACCATTGGAGTTGAAGACCTTAAAATTAAGAGCAACGAGTTTGTTGCGGT AAACTGCATGATGAGGTTCAAGAATTTGCTGGATGAGACTAGTGAAATGAACAGTCCCAGAGATGCTGTTCTGCTTTTGA TCAGGAAGATAAATCCAGATATTTTCGCTCAGGCCATCATTAATGGATCTTTCAGTACCCCTTTCTTTGCCACACGGTTT AGGGAGGCCTTGTTCCATTTTTCTGCTGTTTTTGACATGCTTGACACTGTCATATCCCGGGAAAACCAATGGAGGATGAT GAATGAGAGGGAGATCATAGGTCCGAACTCTATGAATGTAATAGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCTGAGA CATACAAACAATGGCAGGTTAGGAACACAAGGGCTGGCTTCAAGCAGCTTCCTCTGAACCAGAAATTAATGGCCAAATTT AGGAGCAAGTTAAGGAAATGGCAACCGGATAATTTTTTGATTGATGAAGACAGCAATTGGATGCTTCAGAGTTGGAAAGG ACGCATTCTGTCTGGTTGTACTATCTGGGTGCCTGCAAAATGAAGTTATCACACACTTGAATGTAAGGTACAAATAATTA TATAAGAATCTGTCCATTTTGGCATTTCCTTCTTTTCTTCTCCTGTTAATGTTTTTTGAGTCATACTCATATTCCTACCA ATACTTGGTTACTTGAGATATTTATGCTTATATCTAGCAATGAGGAAGCTTATTTTGGTACTTAAATGGTTTCTGGTTCT GCAATTACCTTCCATCTAAATTCTAAACCAAACAGTAGTAGCGGCAACCAGTGTTTATAAATTGAGATGATACGAATTCA AATTGTTGCAAGATGAGAAGATAATTCAAAGATGATGCAGTAATTTTAAAATGAATTACTAATTCTCCATGGATGATGAA TACTCACACTAGCAATTCATGGAATTGGTGCAGAAGCACAATGACGCCGTAGTGCAGCTTAGTGGCGCTTCGCTTCCAAA ACACAAGCAACAGCAAGCACATGGCCGGCGTTGAACAGCTGCAAGATCGAAAGCGATTGCAGAAGCTAGGGTTCCGATTG AAGATTCTCACTTCTCCGGTGAAGACACTCCTCCATCTCTACCCGCTTTCCGTCTTACAAAATTGGGGTTTTGTTTAGAA TTCAATGGATAGGGTTTTAAGTATTAGCAATTGTGGGAGGGAGATGATGAGGAACATTTTGCAATTTTTTTTTATGGTAC ATCGGAAATTAACATTAATTCATATTTTGCAAAATAAAATTAACATGAACGAATATTTATCAAATTAAATACCTTCACTT TTTTTTTTGGTACATCGGGAAATTAAAGACAACAGAAAAAAAAACTACAAGGCTAACAAGTCCCTAGCCAAGATGGGAGC TAACTGCTGAGGCGGAGCCTCAAGATACTCTATAGGACATTGGAGCCCTCCCCCCATGCCAGCAAGACAATCCGCGGCTG CATTTGCATCCCTAGAAATATGGGTAAGCTCTATGCACCAATCTCGATCCAACAAGAGTTTAAGATCAAGGAGCTCTGAG GCATACTCATGAAACTGATACCTATTCTCAGATAAAGCCTTCACAATCTCAAGACAATCGACTTCACATATCGTTTTTCG AATGTTGGCGTTCCATAGTAAAACCAAACCATGCTTAAGAGCTCCAATCTCCGCTGTAATGGGATTCCCCCCACTGCTGC CAGCATAAAACCCGGTTACCCAATTACCGGTTCCATCCCTCACTAAGCCCCCCATACCCATCCTGGCTCCGGTCAAGTCA AAGGCACCATCAGTGTTGAGCTTGAATTCACCTGCGGGAGGAGCTCTCCAAAACGCACCTCCACCCATGCCCAATGTCGT GGACAGATCACTAGAAAGAAAGGAGGAATAGTCGTGATGCTCTGTAGAAATCCAATTCACAGTACTAATAGCGTTCAAAG ACTTATCACCCAAGATTGCATTGTTACGCCACTGCCAAATTCCCCAAAGAGCTGTAGCAAACAAGGAACCATGAGGACCA CACACCTGGTATTTGATCCAAGCCTGGACACTCCCAACTAGAAATCGAGGCCACGTGAGAGCATTCAATCACTTTTACAT TTTTCTTTAGAAGACTAAGAAAAGTATATAGTGACAATGAAGTGTGTTTGATTTGTCTATTTTTCTATTTTCATTTTCAA AGAAAACATAAATTACACCTAAAAACACGTTTGGTTTCGAAAATATTTTCTAAAATATGACCAAACCAGTAAACAAAACA AAAAACCTGTTTTCAGAGTTATGGTCCGTCTTCATCACAACCACCACCACCACCTTCATCGTCGCCATCATTGTTGTCGT CGTCACCGCTGCAACCACCACCACCTTCAGCATCACCACCGCCACGATCACTGTTGCTGCCACTCTATCGCCACCTCGAC CACTATTGTCACCACCACCATCACCGCCGCCATGGCCCTCCCAAACTTTATAAACGTTCTTGTATATGTACTATAAATAT TAATGTTATAGCAAATAACTTACAGAGCCCCGGTGGTTACTGCTTTCCCCTTTTAACGCAAGGAACCAGGTTCAAATCCA TTTTTTTTGAACTCAGCCTATTAACTATTTTACATAACTAACAAGAGCTTAGATAAAAAGTCTTGTCAATTTTTTTTTTA ATCAACTTGTCAAAATAATTAAAAATGACGTTTAAAGGTAAAAAAATATATTTTTAAGATAACAACATTTGAATGTGGTA AATTTTTCTCAAAAAATAATAATTAAGAGTAAAAAATTAAATTCCTTTTCAAATAAAAGCCTTGTGAGAACAGTTATAAA AAATGTTATTTAAGGGTACAAGAATATTTAAAAAATCAAAAAATTTATAAAAGGAAATGTAAAATTTTAAAATTATTATT CTAACTTATAATAAATTCTCACTATATTGTAACAAAAAAAACCTCAATGTATATGAATTAGTTTAATCTTTATTTTTATA TTATATAGACATGAATTGAAATCTTATTTATTTTGGCCCCCTCAATTTTTATATCCTAGTTCCGCCACTGACCACCACCA CCGTCGTCGTTGCAACCACCACTGTTATCAATGTCACTGTTGCCACCTTTGTCATTGCCACCATCACCGTCGTTACCTCC ATCACCACCATCGCCACGGCCACCAAATAGTGAGATGAAAAGCGGTGATGGTGAGTATTCATCATCCTTGGATACATTTT GTTATAAATGTAACCGATATAAATCCCGTTAATTTAACTTACATTTAAAATAAACATATCATAATTAATTCTGCAAAGTA ACTAGGGACCGGTTGTGACAGAGTGTGACATAAGACTGCAAGTGTAGCATGATTTAGTGTGTTTGAATATCCGGTTATTG TAAAATGAGCTTTTGTTTTACTCTTGTTTCACTCACTTTTTTATCTCGAAGTGTGTGTTAACATCAGTTTGCAAAGGTGA CAACGAATATGTAAAAATAGTCACACATTGCCCAGGAAACAAACCTTAAACTAGATGTTTAAGGATTTAATTTACACCTT ATTGGTCCTCACCTTCCAAATTATTGTCCTCTTGAAATTGACAATTGAAGGATAGTCTTTATATATTTTAACACAAATTT GATTCTTTAAAAAAAGCATTTGATTTAAAAAACTAACTAATATCAATATAAAACTTTTTTTTGAAACTATCTAAACTTAA TTAATTCTGCCCATGTATTAATTATTAAAAATATATCATTATTAACTTAATGAAATTAATTTAAATATCATTTATATATT ATCATTATTTAATTTTTTTTATTAATATATACTTAAAAATATTTTAATTTATATATTATCATTTTGGACATTATATATTA TACACATCCAAAAACAATTCAAATCAAGTTATTTAAAGAGAGGTCTGTTAAAGAAATCAATTTCATATGAATCACGTTAA TTTAACTTACATTTAAAATACTCAAACATATTAGAATCAATTCTGCAAACGTTATGTTAAAAATATGAAAACTATTTTTG ATATTAAAAATTGTAGGATTGAAAAAACTCAAAAAAGATATAAGACGATGATGAGACAAACGGAACACACAATAGAAGGC TATTAGAAATAGCTTTTAAAAGAAATAGAAGGCTCTAATCTATGGTTGTACACAACTGCACTTGAAATGGGTGGATTGGA ACTAGTTAAACTGCTGATATATAACTGAATGATGATGTTGATTCAATTTTTGAGTGTAAGAGAAGCTAAAGTCTGTAACC AAAAAAAAAAAGAGAAGCTAAGGAGGCGTTTGTTTCAAGATTTGGAAAGAGATTCCCGGGAATATGAAGGTTGGGAATGA ACATTCCTGCGTTTGTTACAAGATTGGAAACTATGATTCCTGGGTATCAATCATTCCCGGGAATAAAATAACTTCCACAA TTCCCATGATTTCCTTCATATTGATTCCCATGAAAAAGGTTGGGAATTTTACATTCCCATGGGAAAGATGAATGTAACTT CCCACTTCTCCCACAATTTATCATTTTTACCTTTATTTTTAAGTTTTTTTAATTTTTAAATTGCGAAAATTTTAAAATGT TCCCGGGAATACAAAATACTTACCAAACACATTTATAAAATTTACCCAGGAATAACATACCCAATAATCATATTCCTGGG AATGTTATTCCCGGGAATGTGATCTCAAACCTTGAAACAAACGCCCCCTAAAGTCAAAATCAAGTACAAAAGTAAAGTTA ACCCTTTTGTTGGCGCTGTTCTGTTGGACACCCACCCACACGGGTTTTATCTCCGGCGACCGTGGATTTCCGCTCACTGC GTCTTTGATGTTGATGTTTTTTTTGCAATTCCTATACGCGAGTGGCGGTGCGGTTGAGCTCCACAAGTTTCAATCCCAGA TCTGTACGGCGGAAGTGAGCGGTGGTGAGTGTTTTGGAATTGTCAAATGGGTATTTTCGGTTTTTCATTAAAAAAATTAG GGTGAACCGCCCACCATAGAAGATGACCTTTGTTACTTCATTGGTTGCCGTGAAACTGAAAACCCTGCAACCCTATGACT ATGACTAAGATTAAGATTATGAAGCTCCTAAGTCATCATCATCGTGTTTCATTCAAAACCTTCCGCCACGTGCTCCGATA CGGCAACGTCAACACTTACAGCGTCATGATCCCATCGCCGGAGAAGAAGGTGGGGCAACCGAAACCAACCACTGAGAACC AAAATTCGGTTTCGTTGAATGCGGCTGTTCAGGACTTGTGCCGGAAAAGTAGGATGTCAGAGGCTATGGTGATGTTTAAG AAGATCAATCGGACGGGTTTGGCCCCAGATAAGAGGACTTACATGGCTCTGTTTCACATGTTCTGCCGCCAGTTTCTCTA TGAACAGGCTTATAAGCTTTTGACTGAAATGGTTGTTAGGGGGTTTTCACCCTCGGTTTCTTCATTCAACAAGCTTATTC GTAGGTATTGCTCTGAGGGGACACTTGAGGAGCTTGAGGAGGCTCTGTGGATTCTGAGGGGCATGCCTGAGATGGGCTTG TCCCCTGATGCTGTTAGTTATGCCACTGTTATATCCGGGTTTTGCCGAATCAGGAAGCCCATGAAGGCGTATGAATTGAA GCTGGAAATGGTTGACAAGGGCATCTTGCCTAAATTTGGCACATATTCGCAGCTTATAGACTACATGTACCAACATGGGA GACTGTCCGAAGCTTTTGATCTCTTCCGAGAGATGCTGCGCGCGGGTGTCTGGCGACACTCGCCAGATAAGTATTATTAT TTAACTGGAAATTATTCTAAGTTGATGCATGCTTATTGTGATAAAGGTGAAATCAGTAAGGCTTTTCTTGTGCATGATGA AATGATACACAATGGTATTTTCCCTGATGCTCACAAGTATTCGAAGCTTATACAGAAGCTGTGCCTGTATCGGAGACTGT CGGGAGCTCTTTATTTCTTCCGAGAGATGCTGCGCGAGGGTGTATGGCCACGCCATCAAGATAATAAGTATAAATATGTA ACTGAAAGTTATTTTAGTTTGAGGAATGCTTATTGTGTTGAAGGTGAATTCAGTAAGGCTTTTCATTTGCATGATGAAAT GATACACATTGGTATTTTGTGTGATTTTATTACTGGGTTTTCACCGTCTCTTGTTACATACAACGCGCTTATTCATGGTT ATTGTTTTTTTGGGAGGTTTGAAGAGGCTCTGGGAATTTTGAGGGGCATGGCTGACATGGATTTGTCCCCTGATGTTGTA AGTTATGGCGCTATTATATCCGGGTTTTGCCGAAACCGGGAGCTGGGGAGGGCGTTTGAATTGAAGCTGGAGATGAAAGA GAAGGATATCTACGGGATGGATAGAGCCGTATATTCATCACTTATGCAAGGCTTGTCGGATGAGGTTACTTATACAAGTT TGATAAATGCTTATTGTGCAAAAGGTGAAGTGGACAAGGCTCGTACATTGTTGCTGGAAATGAAAGTCAATGGTTATTTG TCAGATTCTGATAGTGAACTGGAGTAATAATCAAAAGAGCCTTGATGGTAGACATCTAAAGCAGATAAGGCAGCATTCTT CTCCCTTTGGTGATGGGTCACAAAGATTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTTTGGGGATGTTACT GGTGCACAATTATTTAATTCTACTCCTACCCACAAGACAACCTCTGCTGATGATTTCTTAAAAGGTTACCAAGTTTATCT ATCTCCTAACCCCAGCAGAAAGTTTGCACATTTCTATGCTAACAAAATGATTAAGAAAGCATCTGCAAAAGCTGAAACTC TGCATATTATTGATTTTGGTATCTTATATGGCTTCCACTGGCCATTACTCATCAAGTTTTTATCAGAAAGAGATGGTGGA CCTCCGAAGCTGAGGATCACAGGGATAGAGTTCCCTTTACCTGGCTTTCGCCTCACACAAAGGATTGAGGAGACTGGTCG TCGTTTGGCTAACTATTGCAAGCGCTTCAATGTTCCCTTTGAGTACACTGCCATAGCATCACGGAACTGGGAAACCATTG GAGTTGAAGACCTTAAAATTAAGAGCAACGAGTTTGTTGCTGTAAACTGCATGATGAGGTTCAAGAATTTGCTGGATGAG ACTAGTGAAATGAACAGTCCCAGAGATGCTGTTCTGCTTTTGATCAGGAAGATAAATCCAGATATTTTTGCTCAGGCCAT CATTAATGGATCGTTCAGCACCCCTTTCTTTGCCACACGGTTTAGGGAGGCCTTGTTCCATTTTTCTGCTGTTTTTGACA TGCTTGACACTGTCATATCCCGGGAAAACCAATGGAGGATGATGAATGAGAGGGAGATCATAGGTCCGAACTCTATGAAT GTAATAGCATGTGAAGGTTTTGAGAGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAACACAGGGGCTGGC TTCAAGCAGCTTCCCCTGAACCAGAAATTAATGGCCAAATTTAGGAGCAAGTTAAGGAAATGGCAACCGGATAATTTTTT GATTGATGAAGACAGTAATTGAATGCTTCAGAGTTGGAAAGGACGCATTTTGTCTGGTTGTACTATCTGGGTGCCTGCTA AATGAAGTTATCACACACTTGAATGTAAGGTACAAATAATTATATAAGAATCTGTCCATTTTGGCATTTCCATCTTTTCT CCTGTTAATGTTTTTTGAGTCATACTCATATTCCTATTTCCTACCAATACTTGGTTACTTGAGATATTTATGCTTATATC TAGCAATGATGAAGCTTATTTTGCTACTTAAATGGTTTCTGGTTCTGCAATTTCTTTCCATCTAAATTCTAAACCAAACA GTAGTAGCGGCAACTACTAGGGGTGTTCATAACCGAACCAATCCAAACAAAACCGACAAACCGATCTAAAAAAACCGAAA TCCAATCAAACCGAAAACCGAACGGACTGAAAATTG
CDS sequence (LotjaGi2g1v0375100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCAATCTTTTCTGGGGCCAGCGATTTCACAAACGGATACCAGTTTTGTGAAGAAGGGAGCATATTTGTCGCGGA TCCAAATCCATATGCAGAATACTGGGATGTGTTTCATCAACATGGGAACCTCTTAGATGTTGAACCCCTTGGTTTTGCAG CAAATACGAGCCCTGTACAAGGTTCTGTGACATCCATGTCCATGAACTCTGTGACAGATCCTTCTCTGGAAGACACTGAC TTCTCAGAAACCACCAAGTTCATAAGCCAAATCCTGATGGAAGAGAACCTTGAACAGGGTCCATTTTATGACTCCCTGGA CCTGCAACTCACAGAGAAATCATTCCATGATGCTCTCATAGACAACAACTCATCTCTATCGCCTAATCAACACCCCTTAG ATGTTCAAAGCCCTTACGGTGAAACCACTAGCAGTGACAGTGACAACAACAGCAATTTACACTACAATTCTTGTGAGTTG AATCCCCCTCCTCTTGATACCCCAGTAGCTGTTATTGGTGATCATGCTTTTCAGCTTAACTCTCATGGACTGCTAGACTT GGATTCTTCTGTTACCAATCAATTGGCACAAAATATTTTCAGTCATGCAGATTCTGTCTCCCAATTTAGGAGAGGATTAG AGGAAGCTACCAAGTTTCTTCTTCCTCCAGAACCCCAGATTGTGACTGGTGTAGGGTCATGTGGAGAATCATCGGATACA GTTGCAGAGAATTCATTTGGTTTAAAGGGTAGTAGAAAGAATCGTGAGCGTGGAGAAAGTGATTTTGAGGAAGAAAAGAG AAGTAACAAGCAATCAGCAGTTGGTGTTGTTGATGAGGTGGATGACTTATCTGATATGTTTGATCGAGTGCTGGTTCATA TGGAACAATTGCCACTTGGTAATGAACACGGTTCCCGAGAGAGTGGCGCAGCAAAAGAGATGCAGCAAGGTGAAAAGACA CCATCATCTGATGGAGGGAAGGCTCATCCAAAGAAACAAGGCAGGAAGAAAGAAACAGTGGATTTGAGGGCACTTCTGCT TCTTTGTGCACAAGCTATTCATACCAATGACAACAGGGGCGCTAGTGAACTTCTAAAGCAGATAAGGCAGCATTCTTCTC CCTTTGGTGATGGGTCACAAAGATTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTTTGGGGATGTTACCGGT GCACAATTATTTAATTCTACTCCTACCCACAAGACAACCTCTGCTGATGATTTCTTAAAAGGTTACCAAGTTTATCTATC TCCTAACCCAAGCAGAAAGTTTGCACATTTCTATGCTAACAAAATGATTAAGAAAGCATCTGCAAAAGCTGAAACTCTGC ATATTATTGATTTTGGTATCTTATATGGCTTCCAGTGGCCATTACTCATCAAGTTTTTATCAGAAAGAGAAGGTGGACCT CCGAAGCTGAGGATCACAGGGATAGAGTTCCCTTTACCTGGCTTTCGCCCCACACAAAGGATTGAGGAGACTGGTCGTCG TTTGGCTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACACTGCCATAGCATCACGGAACTGGGAAACCATTGGAG TTGAAGACCTTAAAATTAAGAGCAACGAGTTTGTTGCGGTAAACTGCATGATGAGGTTCAAGAATTTGCTGGATGAGACT AGTGAAATGAACAGTCCCAGAGATGCTGTTCTGCTTTTGATCAGGAAGATAAATCCAGATATTTTCGCTCAGGCCATCAT TAATGGATCTTTCAGTACCCCTTTCTTTGCCACACGGTTTAGGGAGGCCTTGTTCCATTTTTCTGCTGTTTTTGACATGC TTGACACTGTCATATCCCGGGAAAACCAATGGAGGATGATGAATGAGAGGGAGATCATAGGTCCGAACTCTATGAATGTA ATAGCATGTGAAGGTTTTGAGAGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAACACAGGGGCTGGCTTC AAGCAGCTTCCCCTGA
Protein sequence (LotjaGi2g1v0375100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPIFSGASDFTNGYQFCEEGSIFVADPNPYAEYWDVFHQHGNLLDVEPLGFAANTSPVQGSVTSMSMNSVTDPSLEDTD FSETTKFISQILMEENLEQGPFYDSLDLQLTEKSFHDALIDNNSSLSPNQHPLDVQSPYGETTSSDSDNNSNLHYNSCEL NPPPLDTPVAVIGDHAFQLNSHGLLDLDSSVTNQLAQNIFSHADSVSQFRRGLEEATKFLLPPEPQIVTGVGSCGESSDT VAENSFGLKGSRKNRERGESDFEEEKRSNKQSAVGVVDEVDDLSDMFDRVLVHMEQLPLGNEHGSRESGAAKEMQQGEKT PSSDGGKAHPKKQGRKKETVDLRALLLLCAQAIHTNDNRGASELLKQIRQHSSPFGDGSQRLAHYFANGLEARLFGDVTG AQLFNSTPTHKTTSADDFLKGYQVYLSPNPSRKFAHFYANKMIKKASAKAETLHIIDFGILYGFQWPLLIKFLSEREGGP PKLRITGIEFPLPGFRPTQRIEETGRRLANYCKRFNVPFEYTAIASRNWETIGVEDLKIKSNEFVAVNCMMRFKNLLDET SEMNSPRDAVLLLIRKINPDIFAQAIINGSFSTPFFATRFREALFHFSAVFDMLDTVISRENQWRMMNEREIIGPNSMNV IACEGFERLRGLRHTNNGRLGTQGLASSSFP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 75 | 650 | 576 | 1.6E-247 | – | |
| PANTHER | 75 | 650 | 576 | 1.6E-247 | – | |
| MobiDBLite | 121 | 160 | 40 | - | – | |
| MobiDBLite | 121 | 158 | 38 | - | – | |
| MobiDBLite | 231 | 247 | 17 | - | – | |
| MobiDBLite | 231 | 277 | 47 | - | – | |
| MobiDBLite | 249 | 272 | 24 | - | – | |
| MobiDBLite | 298 | 336 | 39 | - | – | |
| ProSiteProfiles | 333 | 671 | 339 | 68.429 | ||
| Pfam | 342 | 649 | 308 | 2.1E-87 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0375100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…