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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0380300 |
| Transcript ID | LotjaGi2g1v0380300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MLO-like protein; TAIR: AT1G11000.1 Seven transmembrane MLO family protein; Swiss-Prot: sp|O23693|MLO4_ARATH MLO-like protein 4; TrEMBL-Plants: tr|V7CIE5|V7CIE5_PHAVU MLO-like protein; Found in the gene: LotjaGi2g1v0380300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87688694..87693313) extracted from Lotus japonicus Gifu genome v1.2.
CCTGATTCGTGACAGCACTTGCATGTGCTCATCAATTTTCTAACAACACTGCCAACATTTTGCCACCACCAAATACATCT CCAAATTAAGGGTCAAAACTATGTTCTGCATTGAACAGACCATGCGTACAGTAACATTATTTCTTCTTGTCTCATGAGTT AGAGCCATTATAAGACCCACCAAACTACATAATTTTGAACATAACAGCAGCTTCTGAGGAACATGGAGGAAGAAAATGGC GATGGAAGATCCTTGTCTGAAACCCCCACTTGGGCTGTGGCAACTGTCATCAGTCTCTTGGTTTCTTCTAGTTTCTTGTT CCATGGCACATTGACAAAATTGTTTAAGGTACACACAAGTATATTATATCCTTTGTTTTCTCTTCACTGATTTTCTCACA TTCATAGTTTTCTAATTTTCTTATACATTGAATAATCAAATGCCACAGTGGTTGGACAGAACTAAGAGAAAATCTCTTCT TTCCGCTCTAGAAAAGATCAAAGAAGGTAGGGACTTGCAACCCCAAACAGGTTTCCATTAGCATGTTTGGAAATCCTACT ATAATTGATTTCAAACCAGAAGCTTCTGTGTGTAGTTTCGGGGTGTCAGAATTTACTCTGATTCAAACATGCTATTTGTT ATATGCTTTTGGACGGGTGGAACTTACTGCTTTGAAATTTTGTTATCTGTTTCAAGCAGAACTTATGCTTTTTGGGCTTC TGTCATTGCTGATGGGTCATTGGATCATTTTTGTGGCAAAGATTTGTGTTAAGTCATCAGCTTTGAGCAGCAGATTTTTT CCATGTGCAACGGGAAAGAACTTTGGAACGATGGGACGTTTTTTCTTGTCAAATTCAAATAAAACAGTTCTCAAAGAGCA AGTGAGCAATGGCTTGCATAATTATTGTCCTGAGGTACTTTTTCTATCCCTTCCAGTTCACATTTTATGATGTATCAAGT GTTCATATACCATGCTTTTGGCCTTTGGTTTGTTATACTATTAAAATGTTTTTCTCAGTGATTTGATTTTGACTAGTAGT TTAAATTTGAAGAGTGGATTTCTTAGGTGCTCATTTCACCAGAAACTTGTCACTTGTTTCACAGGGTCACGAATCATTCG CTTCTCAAGAAAGCCTCGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGGGATCACCCATATTTCCTATAGCTTTGTTGCT GTTGCCCTGGCCATGATCAAGGTTAAAATAGTTATGAATCATGATCAAACTTCCTTCCTTTTCTAATTTTGTGGTTAGTA CCTAACTAACTTTGTTTATTCAGATATATAGCTGGAGAGAATGGGAAAATGAAGCAAAAACCATTGCCCTACAAAGCTTA CTAGGTTTTGAGAATCTGATAATTTCAAAGAGCCAATAAGTAGTTTGTTTTACTATACATTAATCTTGATTAAGTAATAA GTTCTTTTGATCAAATTGTCTTAGTTTAGATACTTCACAAAGTACATCAAACACAAGATTGAGGCGGTTTAACACCTTCA TCTTTCACCACGCGTCCCATCCTTGGAGTCATCACACAATTCTTGTCTGGCTGGTACTCTACACAGTATTTTTATTTTTT ACTAATTTTCTCTTTATGTGTAAGATCTTTTAAAATGCCTGAAATATTGTACCAATTAATGGTTTATTATTACATGTTCT CATTTCAATGTTGGAACGAAAACCCTTATGGAATGGATCAATTTTATCATCATGGCTTAATTACAAATGGAACAAATCAA TGCAAATGCAAATTTATTAAAGAAAAATGGCATGCTTTTTCTTCATTAAAAGTTTCTTGGCTTCTAAGAATACTGATGAA CCTATGTTGCAGCTATGTTTCACCCGCCAATTCTGGAGTTCTATTAGTCGAGCTGATTACATGGCATTGCGTTTAGGCTT CATTACTGTGAGTAACTTCTATCATAATAAAACTGTAACTTTATCAGAAGAAAGGGTGTATTTTACATGTATAGTTTTCA ACTGAATGAGCTTTTATTAGTTTATCTCAATAACCTAATATTTCTGCATTTTTTTTCTGGTGTTCTACAGAATCATGAGC TTCCCCTAACATACGATTTCCACAACTATATGCTTCGAAGCATGGATGATGAGTTTCGTGATATAGTTGGTGTTAGGTAC TGTTTCTTTATTCAGATGAATTTGGTGGCTTTATTTAATTTAGCATAGTAAATTTGTTAGTGTAATACTAATTAGACTTT CAGAACTGCTAGATTAATTGAATAGAGGAATGGTGAGACCATGCAAGTTATATAAATCAAACAATAGTCTAAAGATTCTC TAGTCCCCTGTTTTAACTCAGATAATATTCTTGTAATGATTGAAGTTCATTAGCACTTAATTTAAAGGCTTAATTTTGCA ACTTCTTTTATTATTGCATTACTTTTTGTTCTGGTTCTTGAATTTTTTTTTTATAACTTCATCTGTACTTGTTCTACAGT GTGCCTCTCTGGATATATGCAATATGCTGTATTTTTCTAAATTTCCATGGTAAGTTTCTTTGAGTTTTAATCAAATCTTG AAATCCTGGTTTTCAGGTATGAACTTAAGTAACTTGAGAAAATAATGTGATTTAACTTGATGGATTCGCTGTAAAAAGAT TTAAAATGTCTGAAAAGCTGTTTAATTTACATCAATGCCATGTTCTGAAATACACGTGCTAGTTTTATTGGTGAACCTAG TGTGTGATACTAAACTCCATATTTTTTTGTCCAGGAAGCAACATTTACTTTTGGCTTTCCTTTCTTCCAGCAATTGTAAG TCAGATGTTTACTGTGGTTTTATCACTTGCCATCTAATAGTGCTTCTACTTCACTGATGGTTTTTCTTGCATGGACTTGC ACCTTAGTTGATTCTCATAATCGGTACTAAATTGCATCGAGTGGTGGTAAAGTTAGCTGTTGAAATAGTAGACTGTTGCC CGCTTATGAAACCTCATCACTTTAACTTAAGAGATAAGCTCTTTTGGTTTGAAAAGCCCAGGCTTCTATTGCGGTTAATA CACTTGATATCCTTTTTGGTAAGTAATGTTGAGTTTCCATTTTACTTTTCATTTTAGACAACACACTTCCTTTAATATCT TTATCCCTTATGCTATCTTGCAGAATGCATTTGAAATGTCAACATTCTTATGGTCCCTGGTAAGAATCTGACACTGCTTT CATATTGCTGCACTGACTCAAGGTACAATGATTGGGTCATAGCATGTTTGGATTAGCTTCTTGTTCTTCAGAATCAATTC TAGAACCAAGAAGCTACTCATTGAAGCTTCTCCCTAGAATTGATTCTGCCATATCTTTGGAGGCTATGGAATGCGAAAAA TATATAAAGATCCTTGAATGGACTGTAAATGTTAATATAATTACTTGCTGTTTACTTTCAGTGGGAAATTAAAGATGCTT CTTGCTTCATGCACAACCGAAGGTTCATCGTGATCCGATTGTCATTCGGGTATAGATTAGTTTATGAGCTGTTTGGATAC GAACCAAATAGCCCTTGTTGAAACTTATCTACTTAAGAAAGATAGATGAGCTCAAATAAGTGTTCTTTCGTTTGTATCCA AACGAGTTCTAAGTCAATGTTCTTACTCTTTCTGCTGAATGAATTGAATCATATTCCACCAAAATCACATCTTCTACTTT CGCACTTTTGTTGCTGCAGGGTTGTCTCCCAAATCTGGTGCAGCTTTATAACATTTCCTCTATATGTTATCATCACGCAG GTCAAGCTTCTTCTTCTTGTTGTTCTATATTATCATTTACGCGATCACATCATTGATGTCTCTCAATATCTTGGTTATGT AAATGCAGATGGGCTCAAGGTTCAAAAAGTCTGTGATATCTGAAAATGTAAGAAAATCACTTTCTAAATGGCAGAGAAGA GTGAAGGACAAACAATGTTCCTCCTATTCACTTCTCACTGCAACAACATCAACAACATCATTGGAGTCTATGCTGGATGG AGTGGACCAGTCATATTCCAGTGCATTAACAAGTGAGGAAGGGAGTTCCTCAGGAACTAAAACTAGTTGTCTCTCTAATC TTGATGATGTGTCCAACTCAAACACTCAGAGCAATGCTCTATTTCCATGTTATGAAGATCACCATGATCATGACGTACAT ATATGATTTGTTCCCCCCTCCACTGTCTTGAGACTGCTGTGCTTGTGTTGTGGAAAGTATGATGAATTAAATTTGAATTC TTTTCACAACTTCCTCTCGTATTATTTAGGCTTACTTTGTTTTAAAGTTGAGTAAAATAACTTTTGGTAGGATCAAGTTA GGAAAAAAATTAAGTTTGGAAGAATGTATTTTGTGAGAAAAAAATTATTGGTTCCACAGCTTGAATGACTTTTTCTTAAT GAAAAAGTAAGAAATTTTAAATTTAATTTTCCCACGAGACATATTTCTATCACAAACTTGTGTGGAAGAACTTTTGCACA GAAATCACTTATTTTGTCAAAGTTCATTTTAGTGGAATGTGCTTTAGGCAAGAGATTATTTGTTATCATTGGAAAGAGAA AAACCTGACTTTGTTACTTTTGTATCTTCCCTTAATCCTTAATGTTTAGTGGAGTCGGAC
CDS sequence (LotjaGi2g1v0380300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTTTGGGCTTCTGTCATTGCTGATGGGTCATTGGATCATTTTTGTGGCAAAGATTTGTGTTAAGTCATCAGCTTT GAGCAGCAGATTTTTTCCATGTGCAACGGGAAAGAACTTTGGAACGATGGGACGTTTTTTCTTGTCAAATTCAAATAAAA CAGTTCTCAAAGAGCAAGTGAGCAATGGCTTGCATAATTATTGTCCTGAGGGTCACGAATCATTCGCTTCTCAAGAAAGC CTCGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGGGATCACCCATATTTCCTATAGCTTTGTTGCTGTTGCCCTGGCCAT GATCAAGATATATAGCTGGAGAGAATGGGAAAATGAAGCAAAAACCATTGCCCTACAAAGCTTACTAGATACTTCACAAA GTACATCAAACACAAGATTGAGGCGGTTTAACACCTTCATCTTTCACCACGCGTCCCATCCTTGGAGTCATCACACAATT CTTGTCTGGCTGCTATGTTTCACCCGCCAATTCTGGAGTTCTATTAGTCGAGCTGATTACATGGCATTGCGTTTAGGCTT CATTACTAATCATGAGCTTCCCCTAACATACGATTTCCACAACTATATGCTTCGAAGCATGGATGATGAGTTTCGTGATA TAGTTGGTGTTAGTGTGCCTCTCTGGATATATGCAATATGCTGTATTTTTCTAAATTTCCATGGAAGCAACATTTACTTT TGGCTTTCCTTTCTTCCAGCAATTTTGATTCTCATAATCGGTACTAAATTGCATCGAGTGGTGGTAAAGTTAGCTGTTGA AATAGTAGACTGTTGCCCGCTTATGAAACCTCATCACTTTAACTTAAGAGATAAGCTCTTTTGGTTTGAAAAGCCCAGGC TTCTATTGCGGTTAATACACTTGATATCCTTTTTGAATGCATTTGAAATGTCAACATTCTTATGGTCCCTGTGGGAAATT AAAGATGCTTCTTGCTTCATGCACAACCGAAGGTTCATCGTGATCCGATTGTCATTCGGGGTTGTCTCCCAAATCTGGTG CAGCTTTATAACATTTCCTCTATATGTTATCATCACGCAGATGGGCTCAAGGTTCAAAAAGTCTGTGATATCTGAAAATG TAAGAAAATCACTTTCTAAATGGCAGAGAAGAGTGAAGGACAAACAATGTTCCTCCTATTCACTTCTCACTGCAACAACA TCAACAACATCATTGGAGTCTATGCTGGATGGAGTGGACCAGTCATATTCCAGTGCATTAACAAGTGAGGAAGGGAGTTC CTCAGGAACTAAAACTAGTTGTCTCTCTAATCTTGATGATGTGTCCAACTCAAACACTCAGAGCAATGCTCTATTTCCAT GTTATGAAGATCACCATGATCATGACGTACATATATGA
Protein sequence (LotjaGi2g1v0380300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFGLLSLLMGHWIIFVAKICVKSSALSSRFFPCATGKNFGTMGRFFLSNSNKTVLKEQVSNGLHNYCPEGHESFASQES LEQLHRFVFVLGITHISYSFVAVALAMIKIYSWREWENEAKTIALQSLLDTSQSTSNTRLRRFNTFIFHHASHPWSHHTI LVWLLCFTRQFWSSISRADYMALRLGFITNHELPLTYDFHNYMLRSMDDEFRDIVGVSVPLWIYAICCIFLNFHGSNIYF WLSFLPAILILIIGTKLHRVVVKLAVEIVDCCPLMKPHHFNLRDKLFWFEKPRLLLRLIHLISFLNAFEMSTFLWSLWEI KDASCFMHNRRFIVIRLSFGVVSQIWCSFITFPLYVIITQMGSRFKKSVISENVRKSLSKWQRRVKDKQCSSYSLLTATT STTSLESMLDGVDQSYSSALTSEEGSSSGTKTSCLSNLDDVSNSNTQSNALFPCYEDHHDHDVHI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 406 | 406 | 7.4E-139 | ||
| Phobius | 1 | 1 | 1 | - | – | |
| PANTHER | 1 | 449 | 449 | 1.8E-235 | – | |
| PANTHER | 1 | 449 | 449 | 1.8E-235 | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Phobius | 10 | 17 | 8 | - | – | |
| Phobius | 18 | 86 | 69 | - | – | |
| Phobius | 87 | 108 | 22 | - | – | |
| TMHMM | 91 | 113 | 23 | - | – | |
| Phobius | 109 | 213 | 105 | - | – | |
| Phobius | 214 | 232 | 19 | - | – | |
| TMHMM | 214 | 233 | 20 | - | – | |
| Phobius | 233 | 237 | 5 | - | – | |
| TMHMM | 238 | 255 | 18 | - | – | |
| Phobius | 238 | 255 | 18 | - | – | |
| Phobius | 256 | 293 | 38 | - | – | |
| Phobius | 294 | 318 | 25 | - | – | |
| Phobius | 319 | 332 | 14 | - | – | |
| Phobius | 333 | 358 | 26 | - | – | |
| TMHMM | 337 | 359 | 23 | - | – | |
| Phobius | 359 | 465 | 107 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0380300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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