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LotjaGi2g1v0388500.2

Overview

Field Value
Gene ID LotjaGi2g1v0388500
Transcript ID LotjaGi2g1v0388500.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Phosphopantetheine adenylyltransferase; TAIR: AT2G18250.1 4-phosphopantetheine adenylyltransferase; Swiss-Prot: sp|Q9ZPV8|COAD_ARATH Phosphopantetheine adenylyltransferase; TrEMBL-Plants: tr|G7KEY2|G7KEY2_MEDTR Phosphopantetheine adenylyltransferase; Found in the gene: LotjaGi2g1v0388500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:88481910..88484733) extracted from Lotus japonicus Gifu genome v1.2.

CCACTTGTCATCAAACACCTACCACCACCTTCCACTTCACAATATTATGGCGGTTAACGATGATCCCATGGTGGTTCCCA CCCTCTCTCCGCCCAACACCTACGAAGCTGTTGTTAACGGCGGCACCTTTGACCGATTGCACGACGGCCACCGCCTCTTC CTCACCGTCTCTCTCTCTTCTCCCCTTTTCAATCTCTCCTTTATTCTTTTCACAAAATCCCCATTTAAGGCTAATGGTTG AAACTTGTTGTGTGTTCCAGGCTTCAGCGCAGTTGGCCAGGCGTCGGATTGTGATTGGAGTTTGTGACGGCCCTATGCTT GCAAAGAAGCAGGTTGGTTTCCTTTTCCATTATAGCTTTCTATAAATTTTCTTGTAATAGTTCCCCTGGTCTATGAAACT GTGCTGAGAAATGAGGAGGATAATTTATTTTCTCCTTATTATGCTTAGTTGTTTCAAAATTGGATTCTTTAATGTCCCAC AATATTAATACTGCTACACTTTCATGCTCTCAACTGGTTAGCTTAAACTTCACAATGGGATAGGTAATTTGGTACTGTTA CAGAAATATATATTGATCCAGTTGCCTTTATAAGATTCTACTTTTGGAATCACAGGAGTTGCTAAAACTTCTTTTAGAGG GGAAAAACTGCTTAGTGTGTTTGGTTTTCTGTTGGGGAACCTCAGAATCAATTCTGATAAAGGAAAATCAATTTTTGATG ACAATATAGATGTTTGGATGTCATTTTGGAGAATTGATTTCAATCTTATAATCAATCCTGCAAGAAGCTAGAGATAGTAA CTTCTTCGGTGAATATAATCAAATATGAGATTTTACAACTGAATTCCACAATATTACCCTATAAAAACCAATTTTTTTTC ATGAATGTATCCAAACATAAATCACTTCACTTTCAACACAGTTTTACTATAATCAATTTTGCCAAAATCATTTTTTTCCT AAAGTCAATTGTGAAAACGCTGATTGAAACACACTTAGTTCTATTGGGAATATGGATTTGTAGGTGTCAATTCCCTCCGT TCGACCCTGTTGTGTCTGATTTGGTCAGGTGATATTTATGTCCCTCAGATACGTACGACAATACGTACGACCTTGTTAGT TTTTTTTTATTTGAACTTGACACAACATTGAGATAAATAGTCTGAAGTTTGAACTTTGCTTTTATCTCCAAGTTTCATAT TCTCCTGCTGAACTCAATGTCATCCTCATTCTATTAGAAGCAAGTCAAATTCGTTTTGGATTACTTGTAGATGAAACAGA TTATGGATAATCTTCAGCAGTTTGTTTTCACAATTCAGACAGTTGAACCGAATTGAACTGGATTTGGTACTTAAACTGAA AAAACTGTTCAATTCTATGGTCAAAATGCTTGAATTGTTTAGCTTTTAAAATTCCATGATTGAATCTGGAGCTAGCTTAA TTTAAAGCCTTTTGCTATGTAATTTTGTTAATTGATAATTTATCTATATGGCAAAGACCAACCTTGTTTCACTATGGCAA TCTTGTGGCATGTAGATTTTTACCTATTAAGGAGTCTTTTTTCTTCTTCCTCCTCATGTTTTCTGTTCTTGTTATGATTT GATTCTTGTTCCACTTTTGCAGTTTGCTGAACTGATACAGCCCATTGAGAAAAGGATACATGAAGTCGAAGCTTTCATAA AGGTAAGAGTCCAATCAATGCCAGTTTTTCATCTGCTCTAAATAAATTTAAGATCAATGAAAAGAATCACCTGCGTTTTG TTCCTTTTTTTTTGGTTGAAAAACTAACATGTATAATTGTTAGCCATAAAACTTTACGCTTTTTACTTTGCATGCTAATG TAGAACATGACAGGTAGATATATGAACTTCTTTAATCATCTCGCTAACAGCAAAGTATCTATTCAAAGAGCTTTTAAGAG GAGTTGCATAGTTTTGTAGTGTTAATTTCTATGTGAGTAAATAGGTGAGATAATAATTGATCTACATTCTACATTACCAC ATCTTGAAACAGCGTCACATTCCATCTATTGCATATAATGTTTCTTCTAGCAGGATTTATATGAAGGAAAACCCTTATTT TTCTTTTCCTACCTTACATGCAGTCTATCAAGCCAGATTTGGAAGTGCAAGCTGTACCAATCACAGATCCGTATGGCCCT TCCATTGTAGATGAAAATTTGGAGGCTGTGATTGTAAGGTTTGTAGTAAGGCCATCTTTGTGTTTGGTGTGAAGTGTCTA TTAGATTTTATATATCTGTAGAAGCTTTAAGAAAGGAACTTGTGAGTTGTGTCTTGTGACAAAGTATTTTGTTCCTATTG GCTATTTTTCTGATCTTGATGTTCATGGTTATAACTGTAGTCTTGCTTTAATGGCAAACTGATTGCAGTATAGACCAAAT GTCACAGAACTTTATATATGTTAAGACTTTTAAAGTGTAGATTATTTGATGTACATGTACTAACTGGAGTTGTTTCTCTT ACAGCAAAGAGACATTACCGGGTGGATTGGCAGTAAACAGAAAAAGAGTTGAAAAAGGTCTTTCACAGTTGAAGGTCTCA ATTTATTTTTTATGTCATTTGGTTATATTTTCCGTGTAAAATATGTAAGAAAATATATTTCTACTCATGAAAACATTTTT GTTTCACATATTAGAAATTGTTTTCGTGGATCTTATGCATTTTTTTGGTGCAATGGATCATATGCAGATTGAAGTTGTAG ATTTGGTCTCTGGAGAATCAGGTGGAACTAAGCTGAGTTCATCAATGTTGCGAAAACTTGAGGCTGAAAAGGCCCAAAAA CCAAGCACGATATCACAGTCATAG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0388500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGTTAACGATGATCCCATGGTGGTTCCCACCCTCTCTCCGCCCAACACCTACGAAGCTGTTGTTAACGGCGGCAC CTTTGACCGATTGCACGACGGCCACCGCCTCTTCCTCACCGCTTCAGCGCAGTTGGCCAGGCGTCGGATTGTGATTGGAG TTTGTGACGGCCCTATGCTTGCAAAGAAGCAGTTTGCTGAACTGATACAGCCCATTGAGAAAAGGATACATGAATCTATC AAGCCAGATTTGGAAGTGCAAGCTGTACCAATCACAGATCCGTATGGCCCTTCCATTGTAGATGAAAATTTGGAGGCTGT GATTGTAAGCAAAGAGACATTACCGGGTGGATTGGCAGTAAACAGAAAAAGAGTTGAAAAAGGTCTTTCACAGTTGAAGA TTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTGGAACTAAGCTGAGTTCATCAATGTTGCGAAAACTTGAGGCTGAA AAGGCCCAAAAACCAAGCACGATATCACAGTCATAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0388500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAVNDDPMVVPTLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAQLARRRIVIGVCDGPMLAKKQFAELIQPIEKRIHESI KPDLEVQAVPITDPYGPSIVDENLEAVIVSKETLPGGLAVNRKRVEKGLSQLKIEVVDLVSGESGGTKLSSSMLRKLEAE KAQKPSTISQS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10695
9 165 157 1.2E-80 –
PANTHER
PTHR10695:SF44
9 165 157 1.2E-80 –
Gene3D
G3DSA:3.40.50.620
21 164 144 6.1E-40
IPR014729
SUPERFAMILY
SSF52374
22 160 139 9.78E-13 –
CDD
cd02164
22 156 135 1.06754E-62 –
Pfam
PF01467
25 78 54 1.5E-5
IPR004821
MobiDBLite
mobidb-lite
143 171 29 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0388500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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