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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0390000 |
Transcript ID | LotjaGi2g1v0390000.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Alpha/beta fold hydrolase; TAIR: AT2G18360.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4; TrEMBL-Plants: tr|A0A1J7G2U7|A0A1J7G2U7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:88585246..88586916) extracted from Lotus japonicus Gifu genome v1.2.
CCGGGACCATAAACAGGTTTCTATTTACTACTCGATCGTGTCCTTAATGTCTGTTTTTTCTATTGTCACCCTCAATTCCT CAAATACTCAACCGTCAGCACCGAACAACTTTTTTCGGTCTCATTTCATTTCGTGGTTCCCCATACATGATTCATTGATT GCATGAGCTGATCATTGGTACCCATAAACGGTAGAGCGTGTACATATGCGAAATCAGGTAGAGAAAATAATCAACATGGT GAACCTGGTGACAGCATACTGCTCAATGCTGCGTTGGGGGATGATGAAGATAGCGGGTGTGAGGCCGTACACGGTGGAGA TAGAGCCAGGGACAGTGATGAGATTCTGGGTTCCCTCAGAAACCCCTTTGAAGCCCAAACCAGTGGTGGTTCTCCTCCAC GGCTTCTGCGGGGATGGCATTATGACGTGGCAGTTCCAGGTTGGCGCTTTAACTAAAAATTACGCCGTGTACGTGCCGGA CTTCCTCTTCTTCGGCAGCTCAGGCACCGACAGGCCGGAGCGGTCCGTGGCGTTTCAGGCGGAGTGTTTGGCGGCGGGGT TGAGGAAGCTCGGGGTGGAGAAGTGCATTGTGGTTGGGTTTAGCTACGGCGGGATGGTGGCGTTCAATATGGCGGAGATG TATCCTGAGCTGGTCCAAGCAGTTGTGGTGTCTGGGTCGTGTGTGGCTATTATGGAGTCTATAATTACAACTGTAGTGGA AGAAGCTGGGTTTTCTTCTTGTTCCGACATGCTATTGCCAACCTCTGTTGAGGGATTAAGGGCACTTCTCTCAATTGGTG CTCACAAAAACTTGGCATGGTTTCCCAACCGTTTCTACAGAGACTTTCTTGAGGTTTGCCATATTTATAACCATAAAATA ATAATTTTCTCTTACCTTCTGATTCTCACTCTAAATAAAAAATATTTCATTATATAGATTTTTGTATAATTTAAAAATTA ATAATCTGCAAAAGAATCACTAAGTGCAGGTTATGTACTCAAATAGGGAGGAACGAGGCGAGCTATTAGATGAATTAGTC ACCAGCTATAAAGAAATCAACATCCCAAAATTTCAGCAGGTAATCTTCATGTTTTGGGTACTAATTAATAAAAAACTTGG TTTATGCTTTCAATTTTTCGCTAACCTTCTTTCATTGTGATGATAATTGCATGACCTCCCTTTTAATTTGTAGCAAATAC ATCTTTTGTGGGGCGCGAACGATAAACTTTTCAAAGTAGAGCTTGCAAAGAAGATGAAAGAGTAAGCAATCTAGACCACA AATTAAATAGTTATATAGTTTGTAGAGTGGCCTATCGCATATATATGATGTCTAATGCAGGAAGCTTGGAAGCAAGGCCA CATTTCAAGTCATAAAAGAGGCTGGCCATCTGGTTCACTTGGAGCGACCCTTTGTTTATAATAGGTGCCTTAAACAGTTT CTATCTTCGGTTATGCCTCTGCCTGAAGCCCTGAAAGACAATCCAACTCACATGTTACACTCTATTGATTATTTACGACA CTATGAAGGAATTTATTAGTTAAAAATCGATGCTCATAAACAAATTTCCTTAATTTTCATGTTAATTAGTAATTAAGATA ATTTATTGTATTCTCCCCTCTAATATGTACGAGGATTTAATTAATAAGACGATGAAGTAAGAATATTAATT
CDS sequence (LotjaGi2g1v0390000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAAATCAGGTAGAGAAAATAATCAACATGGTGAACCTGGTGACAGCATACTGCTCAATGCTGCGTTGGGGGATGAT GAAGATAGCGGGTGTGAGGCCGTACACGGTGGAGATAGAGCCAGGGACAGTGATGAGATTCTGGGTTCCCTCAGAAACCC CTTTGAAGCCCAAACCAGTGGTGGTTCTCCTCCACGGCTTCTGCGGGGATGGCATTATGACGTGGCAGTTCCAGGTTGGC GCTTTAACTAAAAATTACGCCGTGTACGTGCCGGACTTCCTCTTCTTCGGCAGCTCAGGCACCGACAGGCCGGAGCGGTC CGTGGCGTTTCAGGCGGAGTGTTTGGCGGCGGGGTTGAGGAAGCTCGGGGTGGAGAAGTGCATTGTGGTTGGGTTTAGCT ACGGCGGGATGGTGGCGTTCAATATGGCGGAGATGTATCCTGAGCTGGTCCAAGCAGTTGTGGTGTCTGGGTCGTGTGTG GCTATTATGGAGTCTATAATTACAACTGTAGTGGAAGAAGCTGGGTTTTCTTCTTGTTCCGACATGCTATTGCCAACCTC TGTTGAGGGATTAAGGGCACTTCTCTCAATTGGTGCTCACAAAAACTTGGCATGGTTTCCCAACCGTTTCTACAGAGACT TTCTTGAGGTTATGTACTCAAATAGGGAGGAACGAGGCGAGCTATTAGATGAATTAGTCACCAGCTATAAAGAAATCAAC ATCCCAAAATTTCAGCAGCAAATACATCTTTTGTGGGGCGCGAACGATAAACTTTTCAAAGTAGAGCTTGCAAAGAAGAT GAAAGAGAAGCTTGGAAGCAAGGCCACATTTCAAGTCATAAAAGAGGCTGGCCATCTGGTTCACTTGGAGCGACCCTTTG TTTATAATAGGTGCCTTAAACAGTTTCTATCTTCGGTTATGCCTCTGCCTGAAGCCCTGAAAGACAATCCAACTCACATG TTACACTCTATTGATTATTTACGACACTATGAAGGAATTTATTAG
Protein sequence (LotjaGi2g1v0390000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRNQVEKIINMVNLVTAYCSMLRWGMMKIAGVRPYTVEIEPGTVMRFWVPSETPLKPKPVVVLLHGFCGDGIMTWQFQVG ALTKNYAVYVPDFLFFGSSGTDRPERSVAFQAECLAAGLRKLGVEKCIVVGFSYGGMVAFNMAEMYPELVQAVVVSGSCV AIMESIITTVVEEAGFSSCSDMLLPTSVEGLRALLSIGAHKNLAWFPNRFYRDFLEVMYSNREERGELLDELVTSYKEIN IPKFQQQIHLLWGANDKLFKVELAKKMKEKLGSKATFQVIKEAGHLVHLERPFVYNRCLKQFLSSVMPLPEALKDNPTHM LHSIDYLRHYEGIY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 12 | 308 | 297 | 2.1E-135 | – | |
PANTHER | 12 | 308 | 297 | 2.1E-135 | – | |
Gene3D | 25 | 307 | 283 | 3.7E-46 | ||
SUPERFAMILY | 39 | 305 | 267 | 5.14E-47 | ||
Pfam | 59 | 292 | 234 | 1.4E-21 | ||
PRINTS | 85 | 100 | 16 | 1.1E-6 | ||
PRINTS | 85 | 100 | 16 | 8.4E-6 | ||
PRINTS | 129 | 142 | 14 | 8.4E-6 | ||
PRINTS | 129 | 142 | 14 | 1.1E-6 | ||
PRINTS | 143 | 156 | 14 | 1.1E-6 | ||
PRINTS | 143 | 156 | 14 | 8.4E-6 | ||
PRINTS | 248 | 262 | 15 | 1.1E-6 | ||
PRINTS | 280 | 302 | 23 | 8.4E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi2g1v0390000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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