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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0396700 |
| Transcript ID | LotjaGi2g1v0396700.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT5G66560.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q94A73|Y5656_ARATH BTB/POZ domain-containing protein At5g66560; TrEMBL-Plants: tr|A0A151R6R9|A0A151R6R9_CAJCA BTB/POZ domain-containing protein family; Found in the gene: LotjaGi2g1v0396700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89433054..89436922) extracted from Lotus japonicus Gifu genome v1.2.
AGAAATCTTAATGGTTTCTCAAACCCTAAATTGTGATTACACTGTTCTGATTCATATATCAGAACTAATCAAACAAAGTT AATAGGTGAGAAAAAGAGAATTCTTATTCTTGAATATTCCATCATTCACGCAAAAGTAAGTATAGGACTTTTCAACGGCG CCTCCATCCGACATCTCAATTCAAAGGAGAGAACATCAGTAGGTAGAGATTGTGAGTGTGGGACAGTGGGAGTGAAAGAC TAGAAAGAGGAAAGGAAGCTCTCATAAAAGGAAGGTAAACTATAACCCTTTTTCAGGAATTTGCACACTGTTTCACCTAG TTCATTCCTTTTTTCCTCTTTGTAATCAACTCTTATTACCTGGTTTTTATCGATAAAACCTCATCAGAAAGCACAAAAAC ACAATTTACTATCATTCTAATCTTCTATTTTTTTGCAATTGCCTCTGCAAGGTATTAGAGTTCAACCATTTCATCATTCA TGGATATGAATTTGTATTGTACTATATTGTAGTAACTAGTGAGCTAGTGTTAGATTTCAGGAGAATCATTATACATTAAA ATGGCAACAGGGGAAAAACTCAGTTCCAGAGGAAATTCCTGGTTAGATCAATACCTTTTCTCTCTCACTCACTCACTCAC TCACTGCCTTTGAACTTTTCCATATACAAAATAAATTGTTCCTCCATGCAGGTTCTGCACAACTGGATTACCAAGTGACA TTGTGGTTCAACTTGATGACATGAACTTCCATCTTCATAAGGTAAGAATTGAAATTGCAATCCATTATGAATTCAATACT TTAACAACATTCCCCATTCTCTGAAATATGTTGTTTGCATGTTTCATTCAGATTCCTCTCATGTCAAAAAGTAGAAAGTT TCACCAACTGATTACAGAGCAAGACGATGAGGAAGAAGGAGAAGATGTTGAACACCTTCACTTGGCACTCGCAGACTTCC CTGGCGGCTCAGAAGCCTTCGAATTGGCGGTGAAATTCTGTTACGACGTCAAAATCGACTTATCCTCTTCCAACGTGGCT TCTCTCCGCTGCGCCGGAGAGTTTCTAGAGATGACAGAAGAGTATTCTGAAGACAATCTCATCTCCAAGACAGAGCAGTT TCTTTCTCGCTCAGTCCTCAACAGCGTCAAGGACTCCATCACAGCACTGCAATCCTGCGAGCGACTCATGCCTCTGGCGG AGACATTGGAAATCACGAAGAGGTGCATCGCTTCCATTGTCTCCGCCGCATCATCGGCGGATCCCGCTCCGTTCAGTTGG CCGGTGAGCGATTCCGCATCCAAACAGAGCCTCGAGATCGGAATAAGGAGAGGCAGAAGAAGAAACGGTGAAGAAGATGC TTGGTTTGAGGAGATTTCACTTCTCGGTTTGCCTCTGTTCAAGCAATTGATTCTCGCCATGCGAGCATCTGAATTGAAAC CAGAGGTAATCAAAACCTGCCTCATCCATTACGCCAAGAAACGAATTCCAGGTTTATCGAGGTCAAATCGGAAACCGTTA ACATCATCATCATCTTCAGAAGCAGAGCAGAAAGAGCTATTGGAGACTGTGATCTCGAATCTTCCGCTGGAGAAAACTCC AAAGCCATCAACCGCCACGAGATACCTCTTCGGACTGTTACGCACCGCCATTATACTGAAAGCTTCCGAAGAATGCAGAA ACGCGTTGGAGAAGAAGATCGGATCGCAGCTTGAAGAAGCTACTCTCGACGATCTTCTCATCCCTAGCTACTCCTATCTC AACGAAACTCTCTACGACGTTGATTGCGCGGCGAGAATTCTAGGTCACTTCTTGGAGCAAGAACGGAATGCCGCTGCTGC AAACGACGGCGGCATTACGAGATCGCCGGCGTTGATGCTCGTCGGGAAACTCATCGACGGCTATCTCGCCGAGATCGCCT CCGACGCGAATCTCACGGTTTCCAAATTCTACGATCTTGCCATCTCTCTTCCCGACGGAGCGAGGCTCTTCGACGACGGT CTCTATCGCGCGGTTGATGTCTACCTCAAGGTACTATTGAATATAGATTATACCGATTTTCTGTTATGAGATTCTGTTAT AACAGAATTGGTTATTGAAATTGGAAAATTCGGTTACGTTTGCAGGCGCATCCGTGGGTTACGGAATCGGAGAGGGAGAA GATTTGCGGAGTTTTGGATTGTCAGAAGCTCACACTGGAGGCGTGCACTCACGCCGCGCAGAATGAGAGACTACCGGTGC GAGCGTTGGTTCAGGTGCTATTCTTCGAGCAGCTTCAGCTGCGGCACGCCGTCGCCGGAACGCTGATATCGGCGGTGGAT CCCGGGAGGTTATCGGGAGCGTTGAGATCGGAAGTGGAGGGTGAGGAGGAGGAGGAGGATCGTGGTGGAGAATGCGATGG TAGTCACACGTGGCGGGTGACGGTGAGAGAGAATCAGGTGTTGCGCTTGGACATGGATAGCATGAGGACGCGGGTGCACC AGTTGGAGCGAGAGTGTTCCACCATAAGGAAAGTGATCGAGAATATGGACAAGCCGGGACCACGCGGCGGTGGTGGGTGG CGGGCCACCCTGGAGAAGAAGATTGGTTGCAAATTCAAGACGAATGTATGTGATTCGCATGATCATGTGGTTGCTGATAC GCGTAAGGGTAGGTCCCACCAGCGTCCTCACCGTGAATAGGCAGCACCTTAACACTTCCCTCGCGCTAAAATAATCCATT GAAGTTTTAATCAAATCCCACCAGTAATTTCAAATCTGTGTCATAAAAAAATCAAAGAAAGGAAGAAAACACTCCAAAAT ATACCCTCCATTTTTCTAGTAGTTGTTTTTCTATCACATGATATTATTCTTTTGTCGTATTAATTTGGGTGTTAAAACAT TTTCCATAAAAATTTGGAGAATGTTTGAGCCAATTATTTGGTTGATTAGGTAAATTGCTGCTTGACATAGTTAAGGGGAT GGGGACTCATAAGGAGTTTGTAATTTGACTAGCGTTGCATGGCACAATGAAGAGAGCGAAATTTCATGTAAATTACAGGT TGTTATTGGTTACAGATAATTGGTCATCTTATTGCTTCTAGTGAAAGCTGGCTCGTGCTTAACTGCTGACTAAAAACACT GAAGTACTTGGAATGCACCTAAGAAATTAAAAGAAGATAGAAAGGGATACAAGCTGAAGAGACATTATTATTGCTGTCCA TGTCTTGTAGGGCAAATGATTTGATTCTTACTTTGGAAAGTAGGTAATGGTCAAATGTGTATGATTTCCTTTGTGTTCCG CAATTCTTTAGCACCATTGATTTTTATTTGGGGGACTCGTCCATGGTCCACATGGTCCACATCTTCTCATGCAACTATTA TGTTGACAAGAGACCGTGCAACTGAAAAATGACACTCCACTACTCCAGTGATAGAGAATGCGCAGGAACCTTCCCTTAAA ATGTGCAATTCATCTAAAACGAAGACAGCTAATAACAATACAATGTGGATATGTAGATATGCTAATCAGTTAAGTAATTA ATCAGCTTGATGGATTAATCCGGTCAAATCACTCAAGACTATGTTAATTGAGGATGAAATGATCGAATTCTAGTATAAGT AAAGGGGAGGAGAGTTTCATTTAGGTTGGAGAGGGGGTCTTGAGATCGTCCACCATCGTCCACCGTAACCAAGGCCATAA GGGATCCCCTATAAAGACACTCAAATCCCTAAATTAGTGACTAGTGAAGTTTGAAGGTTTCTCTAAGACTTATATAAAGA TTGTGTACCCTCTCTAAGGTTGTATCAGACCCTTTATTTTGTGAGCACGGGTGGATATGGAACTTGAGGGATTTTAATAA GTATTTTGTTTTTGAATGAATCTTGGTCG
CDS sequence (LotjaGi2g1v0396700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACAGGGGAAAAACTCAGTTCCAGAGGAAATTCCTGGTTCTGCACAACTGGATTACCAAGTGACATTGTGGTTCA ACTTGATGACATGAACTTCCATCTTCATAAGATTCCTCTCATGTCAAAAAGTAGAAAGTTTCACCAACTGATTACAGAGC AAGACGATGAGGAAGAAGGAGAAGATGTTGAACACCTTCACTTGGCACTCGCAGACTTCCCTGGCGGCTCAGAAGCCTTC GAATTGGCGGTGAAATTCTGTTACGACGTCAAAATCGACTTATCCTCTTCCAACGTGGCTTCTCTCCGCTGCGCCGGAGA GTTTCTAGAGATGACAGAAGAGTATTCTGAAGACAATCTCATCTCCAAGACAGAGCAGTTTCTTTCTCGCTCAGTCCTCA ACAGCGTCAAGGACTCCATCACAGCACTGCAATCCTGCGAGCGACTCATGCCTCTGGCGGAGACATTGGAAATCACGAAG AGGTGCATCGCTTCCATTGTCTCCGCCGCATCATCGGCGGATCCCGCTCCGTTCAGTTGGCCGGTGAGCGATTCCGCATC CAAACAGAGCCTCGAGATCGGAATAAGGAGAGGCAGAAGAAGAAACGGTGAAGAAGATGCTTGGTTTGAGGAGATTTCAC TTCTCGGTTTGCCTCTGTTCAAGCAATTGATTCTCGCCATGCGAGCATCTGAATTGAAACCAGAGGTAATCAAAACCTGC CTCATCCATTACGCCAAGAAACGAATTCCAGGTTTATCGAGGTCAAATCGGAAACCGTTAACATCATCATCATCTTCAGA AGCAGAGCAGAAAGAGCTATTGGAGACTGTGATCTCGAATCTTCCGCTGGAGAAAACTCCAAAGCCATCAACCGCCACGA GATACCTCTTCGGACTGTTACGCACCGCCATTATACTGAAAGCTTCCGAAGAATGCAGAAACGCGTTGGAGAAGAAGATC GGATCGCAGCTTGAAGAAGCTACTCTCGACGATCTTCTCATCCCTAGCTACTCCTATCTCAACGAAACTCTCTACGACGT TGATTGCGCGGCGAGAATTCTAGGTCACTTCTTGGAGCAAGAACGGAATGCCGCTGCTGCAAACGACGGCGGCATTACGA GATCGCCGGCGTTGATGCTCGTCGGGAAACTCATCGACGGCTATCTCGCCGAGATCGCCTCCGACGCGAATCTCACGGTT TCCAAATTCTACGATCTTGCCATCTCTCTTCCCGACGGAGCGAGGCTCTTCGACGACGGTCTCTATCGCGCGGTTGATGT CTACCTCAAGGCGCATCCGTGGGTTACGGAATCGGAGAGGGAGAAGATTTGCGGAGTTTTGGATTGTCAGAAGCTCACAC TGGAGGCGTGCACTCACGCCGCGCAGAATGAGAGACTACCGGTGCGAGCGTTGGTTCAGGTGCTATTCTTCGAGCAGCTT CAGCTGCGGCACGCCGTCGCCGGAACGCTGATATCGGCGGTGGATCCCGGGAGGTTATCGGGAGCGTTGAGATCGGAAGT GGAGGGTGAGGAGGAGGAGGAGGATCGTGGTGGAGAATGCGATGGTAGTCACACGTGGCGGGTGACGGTGAGAGAGAATC AGGTGTTGCGCTTGGACATGGATAGCATGAGGACGCGGGTGCACCAGTTGGAGCGAGAGTGTTCCACCATAAGGAAAGTG ATCGAGAATATGGACAAGCCGGGACCACGCGGCGGTGGTGGGTGGCGGGCCACCCTGGAGAAGAAGATTGGTTGCAAATT CAAGACGAATGTATGTGATTCGCATGATCATGTGGTTGCTGATACGCGTAAGGGTAGGTCCCACCAGCGTCCTCACCGTG AATAG
Protein sequence (LotjaGi2g1v0396700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATGEKLSSRGNSWFCTTGLPSDIVVQLDDMNFHLHKIPLMSKSRKFHQLITEQDDEEEGEDVEHLHLALADFPGGSEAF ELAVKFCYDVKIDLSSSNVASLRCAGEFLEMTEEYSEDNLISKTEQFLSRSVLNSVKDSITALQSCERLMPLAETLEITK RCIASIVSAASSADPAPFSWPVSDSASKQSLEIGIRRGRRRNGEEDAWFEEISLLGLPLFKQLILAMRASELKPEVIKTC LIHYAKKRIPGLSRSNRKPLTSSSSSEAEQKELLETVISNLPLEKTPKPSTATRYLFGLLRTAIILKASEECRNALEKKI GSQLEEATLDDLLIPSYSYLNETLYDVDCAARILGHFLEQERNAAAANDGGITRSPALMLVGKLIDGYLAEIASDANLTV SKFYDLAISLPDGARLFDDGLYRAVDVYLKAHPWVTESEREKICGVLDCQKLTLEACTHAAQNERLPVRALVQVLFFEQL QLRHAVAGTLISAVDPGRLSGALRSEVEGEEEEEDRGGECDGSHTWRVTVRENQVLRLDMDSMRTRVHQLERECSTIRKV IENMDKPGPRGGGGWRATLEKKIGCKFKTNVCDSHDHVVADTRKGRSHQRPHRE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 606 | 599 | 9.4E-263 | – | |
| PANTHER | 8 | 606 | 599 | 9.4E-263 | ||
| CDD | 13 | 123 | 111 | 5.69664E-40 | – | |
| SUPERFAMILY | 13 | 128 | 116 | 6.83E-15 | ||
| Gene3D | 14 | 173 | 160 | 3.4E-10 | – | |
| Pfam | 21 | 130 | 110 | 1.2E-7 | ||
| SMART | 22 | 132 | 111 | 4.8E-5 | ||
| ProSiteProfiles | 22 | 96 | 75 | 12.805 | ||
| ProSiteProfiles | 206 | 481 | 276 | 94.147 | ||
| Pfam | 206 | 457 | 252 | 4.6E-89 | ||
| MobiDBLite | 504 | 523 | 20 | - | – | |
| Coils | 533 | 553 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0396700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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