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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0396800 |
| Transcript ID | LotjaGi2g1v0396800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT4G37210.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein; TrEMBL-Plants: tr|A0A151TI33|A0A151TI33_CAJCA Nuclear autoantigenic sperm protein; Found in the gene: LotjaGi2g1v0396800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89444191..89448518) extracted from Lotus japonicus Gifu genome v1.2.
CACGGAAATAGGAAAGTACTTTGTGACAATGATTTTATGAAAGAGAAAATGAGATCTCCCTTTACTAAAACACTCTCTAT TTCAGTAAACATGAGTTGCCTCAATCTACTAAGTAATGCATGTCATACAGGAAACTTTGAATTCTACCTTCTGATATTGT TGGGAGTGGACACTTTGTGTCACAATGTCACACATCCATTGTTATAAAATCTACTAATGCTAGCGCATACAATCATTATT GTAAATGAAGTGCATAATGCTAATGACCTTGATTGATAAGTTCTATGATTTCATAATCCCATAAGTCATGGTCTGCAGGT AAAAGAAAAACAGTTCCCATTGTTAGTTGTTTTTCAAGATATAAACAGTGTCCACTAAGAAACGACCAGGAAGAAGATGA TGAGGATAGTGATGCTAAAAACTTGGCAGAAGATGCTGAAAACAAGTATAACCATGACCATGCAAGGAAAATTGCTTGAT ATTACAAAAGATAAACACATGATACATAATCTTACAGTTACAGAGTGATAAGATCAATTTTGTTACAAATATAATTGAAT GCTAATGACATTGATAGACAAGAATACATTACTCTACTGAGTTATGTTTTTTTAGCTTCAGGCCCCAAAATACCATTCAC CACCGTCGTTGCAACCAAAACGGCAAAAGCCTCTGCTCCCACCACCGCTCCTGCCTGCGCCAAACTCCCAAAGCCCACCG CAGACTCCACTTCCTTCTCCGCCGTCTCAATTCCCTTCTCCAGCCCCCGCTCCGCCGTCTCCAGTCCTCGCTCCGCCGTT TCGAAGCCCTCCTTCACAATCTCCTCAGCCTGTTCCTCCGCTTTCTTCAGACTCTTCCGTATCCCGAACAGTCCAATATC CTGCGCCGCCGATTCCCTCACCGTCAACGCCGCCGGAGCCGCCGCGAGAAGGAACAGCAACTCCCTCCGTCCAGCCCTCG GAAATACCGCCACCGGCACCGTAGCTCGCGGCTTGCACGAAGACGGCGTCGCATTGCAAACGCCGACACGGCGGAACGAG AGAGTTGAGAACGATGACGACGACGAGATTGCACAACCAACCATCATCGCTTCACTCTGATTGATCCTCTTTGTGTGGCT TCTGCAAATTTAACCAATTCATTTAATTACCATAATACCCTCTCCTTAATTAACCGTCGTCAGCTAAACACGTGTACAAC CCGATTCCGAAAACGGGTCAGGTAAAATGACCCATTCAGAATCGGGTAACCGGGTCACTCTTTTTCATCTTTCACATTTT GCGCTCAAAACCCAAACCCTCGCTCTCTGAATTGAAGAACCAGAAACCTCTCTCTCTGTGTTGAAGTGAAATTCGCTGAA GGCAACAATGGTGGAAGAAGCTCCTGCATCTGAAACTTCCGTTTCAATGGCTCCATCAGAGGAAGCTGTGGCGGTCGACG GAACCCTAAACCCTAGTGAACACGGAAAAAGCGAAATCACTAACGGCGCCACCGTGGATTCAGCCGCGATCGGCGGTGCT GAGTCCGCTTCCAACGCTGAAACTTCTGGGAAGAACTCGTTGGAGTTGGCGGTTGAGCTCATGGATAAGGGAACCAAGGC TATGAAGGAAGACGATTTCGGAGAAGCAGCTGAGAATTTCAGCCGTGCTCTTGAAATCAGGTTTCCAGAAATCATTTCTA ATTTTTGATTTCTCTCTACTCGCAATGTTCTAAATGGAAATTTTGATTGATTTAGGGTTGCTAATTATGGTGAACTTGCA CCTGAATGTGTCAATACGTATTACAAATATGGGTGTGCCCTTCTATACAAGGCTCAGGAGGAAGCTGATCCTTTGGGTGA TGTGCCCAAGAAGCAGGAGGGGTCTCAACATGGCTCCAGTAAAGATGAATCTGTGAAGAGTACTATCAATGCTGCTGAAT CTTCCACTGCTGCATCTTTTTCAAGCAATGCTGAGCAGGACATTGCTTCTAATGACCAGGAGTCAGCAGTGGATGATGGT AATGTGTGTTGCTTCCGGTGTTTTTCGCTTACTATTTTAAACTTCTTTCCATAATTTGTTGTTTGACTTGGTTAGTGTTC CTATAATGCATTTTTACACGGTGGCGTATCTCATGTGAATTTGAACTTGTTTCTCAAAGAATGAGTACAGTTTTCCTAGG TTGGCTTAGAAAGCATGCATGTTTTTAATGTGCTGTTGTGGTCTGCATTAGCCTGCCCTTCTCACTAGTCATGGCAAAAA AGAGTGTTTTGTGGTATTGATTTTATGATAGACAAAATATGCGATGTGCTTTATATAGAGTTACTAGAACATTCTTTCTT TCTGCAGAGATGAGTTGCCTTGATCTATAAAGTATACACTATTTACTGAAAAGGAAAGTGTTCTAGGCTGTTTATACTTT ATACTAATAAATCAGTCCTCTTTCTCATTCTCTTTGACATGTGCATGCTTGGTACCCTTGGTGAGATTTCGACTTTGTTG TCACCTGTTATGGACTAAGTCTAGGGAACATGCTTGATGCACATTACCCTGGACACTTTGAAATTTGAATACTACCTTCT GAGATTGTTGGAAGTTGACACTGTCACAGCATCAAAACCATTCTCATAAATTTTACTAAAGCTAACATGCAGTCATTATT GTAGATGAAGGGCATTATGTTATTCACTTTTGTGGATAAGTTCTATGATTTAAAAGTCACATAAGTAATAAGTTGTAGCC TGCATGTAAAAGAGCTTCTCATTGTTGTGTTTTTCTAAATATGAAACAGAGTCCACTAAGAATTACCAGGAAGAAGATGA TGAGGATAGTGATGCTGAAGACACAGAAGCTGATGAAGATGAATCTGACCTTGATCTGGCTTGGAAAATGCTTGATATTG CTAGAGCAATTGTTGAAAAGCAATGTGTCAACACAATTGAACACGTGGATATATTATCAACATTGGCAGAAATTTCATTG GAAAGAGGTATTTTCATGCTCTTATGTTTATTTTAATTTTGACTGGTACTTTCTTCCCCAGACTCACATAAAAGAAGGGG TAAGATTGTTCTAAAAGTTGGATTCTTTCTTGACTCTGTTCTGTGCAGAGGAGTTTGAAAATTCTCTATCCGACTACCAG AAGGCACTATCCATCTTAGAACAGCTAGTTGAACCAGATGATAGATATATTGCCAACTTGTATCCTTGTCATTATTTTTA TCTAGATATGTGATTTTAGTTTACTGATGTTTGTAGTCTTTAATCTGTTTTAATGATAGTGAAAAGTAGTTACAATATAT CACCAATTCACTTATTCATAAAGTCTGCAACTAGGATAACCGATGATGTTCTCTTCCACTCCTAGACACAGCCTTAACTT GTGAATTAGAAATTTCCGTATATGCTTGTGTTTGGAGGTTGATTCTAAACCTGAAGAAGCAATTGCCTATTGTGAGAAGG CTGCATCTGTTTGTAAGGCACGATTAGATCGTCTCACAAATGAAGTCAAGAGTATAACTCCAGCTTCTGAGGCCAAAAAT AAATCAATAGAGGATAAACAAGCGGAAATTGAAACTCTTACCGGTCTCTCAAGTGACCTGGAAAACAAGGTATACTTCTT AAACCTTTTTCAAAATACCTCTTTGTCTTGTGTTGTTATTTTAATATAAATGGAAATTTATGGATTTGCAGCTTGAAGAT CTGCAACTGTTAGTCTCGAATCCAAAATCAACTCTCTCTGAGCTCCTAGAAAAAGTAGCTGCCAAGGCAGGCGGTGGTAA GGAATCAATTCCAGCAAAAGTCAGCTCCTCACAGCTGGCTACTGCCAACAGCAGTGGAGGTTTTGACTCTCCAACCATTT CTACTGCTCACTCTAATGGATCTGCTGCTGGAGTCACACACCTTGGTGTGGTAGGAAGAGGAGTTAAGCGAACATCGCTT GCTCCAGAAGCAAGCGCACCAAAGAAACCAGCATTAGAGTCAACCGAAGGAAAAGGTGATAGTGGCAGCGCTTGATGATG TATCTGGGCATTGGTTCTTTAGTATCGGGTGTTCAGTTTGAACTTTGAATGGAACCATATAGTTTGATTACTCTTTCAAG TATTGATAGGATAAATTCGAGCAGGTTCCTTGTTTGACTGTTTTCGGAAACTGTTATGCCATATGCCCTCCTTACTGTAA CTTTTATATGTGCAGCTAATTGACCCAGTCAAAAGTTTTAAAATACATTTTATTAAATATGCTAACGCTGTCAATTGTCA GATACCTGTGCTTCTAATGTGGAGGATGATGTTCAAGAACTCCTATATGAATATTTTTCATATAAATGAAATTTTCACTA TATTTTCA
CDS sequence (LotjaGi2g1v0396800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGAAGAAGCTCCTGCATCTGAAACTTCCGTTTCAATGGCTCCATCAGAGGAAGCTGTGGCGGTCGACGGAACCCT AAACCCTAGTGAACACGGAAAAAGCGAAATCACTAACGGCGCCACCGTGGATTCAGCCGCGATCGGCGGTGCTGAGTCCG CTTCCAACGCTGAAACTTCTGGGAAGAACTCGTTGGAGTTGGCGGTTGAGCTCATGGATAAGGGAACCAAGGCTATGAAG GAAGACGATTTCGGAGAAGCAGCTGAGAATTTCAGCCGTGCTCTTGAAATCAGGGTTGCTAATTATGGTGAACTTGCACC TGAATGTGTCAATACGTATTACAAATATGGGTGTGCCCTTCTATACAAGGCTCAGGAGGAAGCTGATCCTTTGGGTGATG TGCCCAAGAAGCAGGAGGGGTCTCAACATGGCTCCAGTAAAGATGAATCTGTGAAGAGTACTATCAATGCTGCTGAATCT TCCACTGCTGCATCTTTTTCAAGCAATGCTGAGCAGGACATTGCTTCTAATGACCAGGAGTCAGCAGTGGATGATGAGTC CACTAAGAATTACCAGGAAGAAGATGATGAGGATAGTGATGCTGAAGACACAGAAGCTGATGAAGATGAATCTGACCTTG ATCTGGCTTGGAAAATGCTTGATATTGCTAGAGCAATTGTTGAAAAGCAATGTGTCAACACAATTGAACACGTGGATATA TTATCAACATTGGCAGAAATTTCATTGGAAAGAGAGGAGTTTGAAAATTCTCTATCCGACTACCAGAAGGCACTATCCAT CTTAGAACAGCTAGTTGAACCAGATGATAGATATATTGCCAACTTAAATTTCCGTATATGCTTGTGTTTGGAGGTTGATT CTAAACCTGAAGAAGCAATTGCCTATTGTGAGAAGGCTGCATCTGTTTGTAAGGCACGATTAGATCGTCTCACAAATGAA GTCAAGAGTATAACTCCAGCTTCTGAGGCCAAAAATAAATCAATAGAGGATAAACAAGCGGAAATTGAAACTCTTACCGG TCTCTCAAGTGACCTGGAAAACAAGCTTGAAGATCTGCAACTGTTAGTCTCGAATCCAAAATCAACTCTCTCTGAGCTCC TAGAAAAAGTAGCTGCCAAGGCAGGCGGTGGTAAGGAATCAATTCCAGCAAAAGTCAGCTCCTCACAGCTGGCTACTGCC AACAGCAGTGGAGGTTTTGACTCTCCAACCATTTCTACTGCTCACTCTAATGGATCTGCTGCTGGAGTCACACACCTTGG TGTGGTAGGAAGAGGAGTTAAGCGAACATCGCTTGCTCCAGAAGCAAGCGCACCAAAGAAACCAGCATTAGAGTCAACCG AAGGAAAAGGTGATAGTGGCAGCGCTTGA
Protein sequence (LotjaGi2g1v0396800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEEAPASETSVSMAPSEEAVAVDGTLNPSEHGKSEITNGATVDSAAIGGAESASNAETSGKNSLELAVELMDKGTKAMK EDDFGEAAENFSRALEIRVANYGELAPECVNTYYKYGCALLYKAQEEADPLGDVPKKQEGSQHGSSKDESVKSTINAAES STAASFSSNAEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDESDLDLAWKMLDIARAIVEKQCVNTIEHVDI LSTLAEISLEREEFENSLSDYQKALSILEQLVEPDDRYIANLNFRICLCLEVDSKPEEAIAYCEKAASVCKARLDRLTNE VKSITPASEAKNKSIEDKQAEIETLTGLSSDLENKLEDLQLLVSNPKSTLSELLEKVAAKAGGGKESIPAKVSSSQLATA NSSGGFDSPTISTAHSNGSAAGVTHLGVVGRGVKRTSLAPEASAPKKPALESTEGKGDSGSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 46 | 452 | 407 | 2.3E-108 | – | |
| PANTHER | 46 | 452 | 407 | 2.3E-108 | – | |
| SUPERFAMILY | 63 | 123 | 61 | 4.67E-5 | ||
| SMART | 68 | 101 | 34 | 10.0 | ||
| MobiDBLite | 131 | 146 | 16 | - | – | |
| MobiDBLite | 131 | 210 | 80 | - | – | |
| MobiDBLite | 147 | 177 | 31 | - | – | |
| Gene3D | 162 | 355 | 194 | 1.2E-19 | ||
| MobiDBLite | 189 | 210 | 22 | - | – | |
| SUPERFAMILY | 212 | 309 | 98 | 3.22E-8 | ||
| SMART | 238 | 271 | 34 | 0.91 | ||
| Pfam | 239 | 275 | 37 | 5.4E-9 | ||
| Coils | 244 | 271 | 28 | - | – | |
| SMART | 280 | 313 | 34 | 160.0 | ||
| Coils | 335 | 362 | 28 | - | – | |
| MobiDBLite | 384 | 421 | 38 | - | – | |
| MobiDBLite | 389 | 420 | 32 | - | – | |
| MobiDBLite | 434 | 462 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0396800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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