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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0398200 |
Transcript ID | LotjaGi2g1v0398200.1 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G66880.1 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3; Swiss-Prot: sp|Q39193|SRK2I_ARATH Serine/threonine-protein kinase SRK2I; TrEMBL-Plants: tr|A0A1D6Y9D0|A0A1D6Y9D0_9FABA Open stomata 1; Found in the gene: LotjaGi2g1v0398200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89521548..89527606) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGAGCAAAAGAGTCGAAAAAACTTTTAATAAAAATGTATTTTCAAGTTAACTCAACTAATATATATATATATATAT ATATTTTTTTTTTTTTTGTCTATTCAACTAATATTGAAACACACATGATCTTCTATTAGAATGGAGTGAATGAGGCTGGG GACCGCCCTCCGCTGCATGTGTGGTACAGTGGAAGGCAGGCAAAGTGGCTGCTGCGGCTGAGTGACAACCGAACCAGCTC AATTTATCAACCAAGCTACAATCAAAGCAAAGCAACCAACAAATCAATCAAATTTTACTTGTAAAAGATAAATAAAATAA GAAATAAAAAAATAAAAAGGCCACTTGCATGGATAATTTAATTCAGTGAGACAGTGACAGAGTGAGAGAGAAAGAATAGT GAATAATAGAAATCAATGTTGGTTACCATTCTAGGCGGCGCCATCTTGGACGCTCGATAACGACGTCGTTTACTCGCCGG TCGCCGATTCTCTCTCCGCATCCACCACCACCGATGGATCGGGCGTCGGCGACGGCTACCATGGATATGCCGATCATGCA CGACAGCGACCGGTACGATTTCGTCCGCGATATCGGGTCAGGGAACTTCGGCGTCGCCAGGCTCATGAGGGATAAGCACA CCAAAGAGCTCGTTGCTGTCAAGTACATCGAACGCGGAGATAAGGTTAGTACAGTATAGTCAATCAATCACCATATTCAT ATTGTCCCAAAAAAACGAGGTTTGCAGATTTTTTGGGATAAAGGAACTGGAAAAGTGGAAATGAATCACATGTTCATTTT TGTTGTCTGATATTTATTGACGCTGACGTGTGATGCTTCTTTGGAGGACCATGTTTTGGGTTTCCATTTTTGTTTTGGTG CTAATGGAAGTTTTATTTTTGTTTCTTTCAATAATAGCTTTTTTTTTCTCTCTTGCTGTTTTGTTAGTTAGTTTCGGTGA TGTCAGATTGTTGAATATGGAAAATTTTCCAAGCTCAACTCGCATCTGAAGTCAATAATCAGTTAATAATGCATTTTGTA GCATGAATGAGCTGTTTCCTGTTATGGAAATGAGAGAAAACAGTGACGAATTCAAAGCTTGCACTCTTTTGGTTTTCTTG TTGGAGCACTAGATTAAGAATTTTGGGCGTCATATAGAAAACCATTGGTATGCTTTTACCAAATAGTTTAAGTTCATGTT ATTGTGTATGGCAGATTTATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTCAGGCATCCTAACATTGTCAGG TTTAAGGAGGTTGGTATATTTTTATATATCTTTTTTTTTCAGACGAAGGAATGAAGGATATTATATTTACGGAGAATGTT CTATGAAATTTTGCTCAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATT TGAGAAAATCCACAGTGCAGGGCGTTTTACTGAGGATGAGGTTTTTATACAATTTATTTACTTTTCTGACACCATTCATA GAGAAAAAAAGTTACTTGTATTCTGTTTCCTGTTTTACTAGTTAACCCGTTGTTAATTTGCAGGCTCGTTTCTTCTTTCA ACAACTCATATCTGGGGTCAGCTATTGTCATTCAATGGTAATTGAACTTCTCTCCCTCCCCCAACATCTGATCTTATAGG TCTAAGTATGTATAAGTAATGTATCGATCTTCTGAGTATTGTCTAATGTATATTATATCTCCTCATGAAGCAAATTTGTC ACCGGGATCTGAAGTTGGAAAACACTTTGTTGGATGGAAGTCCAGCACTTCATTTGAAGATATGCGATTTTGGATACTCC AAGGTAAGGATTTCTTTGTCTCACTAGCCTTTTGCATTCATGGTGTGAGTTCTGTATATATTTTACTAGGATGTGTGCGC TGTAGTTGACTAACTTTTCCTTTAATTGGTGATTTTGTCAAAAAAAATACTTATTGCACATTTGTGGCTGCTATTTAGGC TCCTTCGAAAACTAGCATGCCTCCAAGTTACTTCCTGTATCTGGTTGCTCTTTAACTTTTCTTGTGAATCTCTTTTCAAA AGATTTTTTCAGTAATTTCTGTAATTGGTAAGGGACAATTGTTAATGACTATTTATTATGACAGGAAACTAGCGGCATCT CATGATTTCTCTGTTTCACTTGCACATCTTTGTGGTGTTGTTAAGACAATTGAACCTGTATTTGTGTCATATTTTATGGT GCATAGTAAATGTGCAGTTAAAATGGAACTTCCCATGTCCATGCAATGATGCCTAAAGTCCTTAATTTTTCTTTTACCAA TTCAATTTTCATCTGGCTTGTAAGCAGTGACGGATCCAGAAATTTATTGTTGTGAGGGCAATATATACATATAAATTCGT ATAAAAAAATTTAATTTAATTATATTACTAGAAGTGAGTGCATTTTTTACCAAATAAGGGACACAAGTAAATACATTTTT TACCAAAGAAGTCTTAAAAAACCACATACTTTTACCACTCAAGTGAGGACATTTACCAATGTGGAATACAAGTGAGGGCA TTTAGCAATGTAGAACACAAGTGAGAGCATTTTTTATCAAAAGAGTCACAAAAAACCACATACTTTTACTGTACAATTTT TTTCTAATGATTTTTTTAAAAATTTAAGTGAGGGCACATGCCCTCATGCTGTTCTACCTAAATCCGTCACTGCTTGTAAG CACCTAAATATTCATTTTACAAGCTAATTTGGAACTTCTCAAGTATAAATCACCATTGGAAATCTAATAGATTTTTATCT GGCTTGTAAGCAGTCTTCTGTGCTTCATTCTCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTAC TGCTGAAGCAAGAGTATGATGGCAAGGTAGAGTACTTGGTTTCTTGGTCTTGTTCTTTTACTGTATTATTACAGTCATAA TTTGATAGTAATTATTTACGGGTTAGTGAGTCCTGGTATAAGAAGCTAAAGCAGTGATATTCTGGTAGTCTGTCTGTTCT GACCTACTCCAGTGGTAATATTTTTCTGGACTATGAACTAGGAATGGTTTTCTCTTCTGGTTGTCATGCTGATGCAATTC ATGTTTTCTTGGCACTAGTTAATCTTCTCTCCTTTCATGAACTTAAATCTCTACTTTTATTAACGAAAAGAGGGTGAGAG TTAATTTGTATCTTGCACCTTTTTATTCCTTAAGTTCATAAGGTCCATATTTTGTTGCAATTAGATAATGATTGACCATT CCCCTCCACTCTTCCTTTTTTGCATGCCCACTCTTCCTCCCTTAGTCCTTTTTTTTTCATACTTAGATTTTAGAACGTAT TCACATGTGACAGCGTACACACTTGTAGTTGTAAGAATGCTTTGTAATTTTTTAATCTGCAATATCACTAGTTAAGCACC TACAAATAAGCTTGTATTCTTGAGCCCTGCCCATTTGGGTTGGTGGTGTGATGAGTTCGGATTGTGCTCTGGGCAAATAT TTCTGTTTTTAATGTTGCCAATATGTATATCGAGTATCTTATTGTGTTTCCACTATGCTACCATGCATTTAATCAGATTG CAGATGTCTGGTCATGTGGTGTAACCTTATATGTAATGCTAGTGGGAACATATCCTTTTGAAGATCCAGATGATCCAAAG GATTTCCGGAAGACAATTCAGGTTGTTCACCTATATTAAGCTTTTTGCATCTTTTTCTTCATGATGAGCATCTGATTGCA TTACCTTAAGTGTTTTGCTTGGTTCCTTGCAGAGGGTTCTCACTGTCCAGTATTCCATTCCAGACTTTGTTCAAGTGTCT CCTGAGTGCCGCCACCTTATCTCTAGGATCTTTGTTTTTGATCCTGCAGAGGTATTTCTGTTTTCCAATAGCTCCCCTAC TGAACCTAATTTCTATTATTTGACACATGCTATACAATTCTTGAGGAGTTTTGTCAATAGATGCATTTTATATAGTATAT ACTACTACTCTACCTTGGCTTAGAATCCACTAATAAATAAACTGAGTACTTTTTGATACTGTCTTGATAAACCTAGAGTT TTACTCTAAGACGAAGTTCTCCTTTGACACGAGTTTCAAATACTCTCTGAATTTGTAAAAATCGCAATATTACTATTAAC TATTCAAAAACCTAATTTACATAAGACATCTAAAGGGTAGTAGCCTGAACTTGGGAATTTGCCTTCTCAGTGGAAGTGAT ATTTTAATATTTTCCTTTTACATTGTCCGGGTCCAGAGCTGCTTTGATTGTGTATTAGCATTGTTAATAATATTTTGTAG GCACAGCTGCATCAGTCACTATAAATTAAGAAATTGTAATATTAGACAACAGCAAAAAATGTTCATTGCATATTATGAAC TATGAAGATTGAGCTCTTCTTAGCCGTTTTCGTTGCCAAAACCTGCACGTCAGACACTTCTTAGACGTTTGCTTAAACAC TCAAATATGATTTTGGGAGACATGACACTTATAAAATTATTTTATTTTAGTGTATTTTAAATTATTCAAAAGTAATTTAA AATATGTCTAAAAAGTTAAAAGTAAAACCTGAAAACATTTGAGGAACTTCATTTGGTCCACACAACGATGATCATTTTGT TGTCCACGGCTCCACGCATGTATACATACATAATAAGGGGCATATCATGATATCAAGTGAACATAATAAGTGACCAGCTA ATTTTGACCACATAACCATACATGAATGATCTATATTAGCTCCTCTCAAACTAATTTGTCCATTCACATGTTGCATGTGA TGTGCACACACACTGTATCTCACAATCACACGCACTCCACACATGTTTTTGTTTGTGCTTCATATATTATGAGTCCAACC TTTTGCTTATACAAGGTTTAAACTTTACTCACTATGCCTAATTAATTCGTTCATTTTGAACCTTATGCCTTTGGACGTCA ATGTGGCAGAGAATCACCATTCCTGAAATACTGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGATCAAAAGATAAT GAGTAACCAATTCGAAGAGCCAGACCAGCCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACTATAC CAGCAGCTGGGTCTTATTCTTTAGATCAGTTTATGGCTGATAACCTTGATATGGATGATGGCATGGATGACTTAGACTCC GACTTTGAACTTGATTGTGATAGTAGTGGGGAGATAGTGTATGCCATATAATTTTATCATCATCTATAGTTGGAAGACAT CATGCTGAAAGAAGAGCATCTTAATGTTCAGCTTCAAGAACTTCTCAGCATCGAGGAAAGAGAAATGTGGGGAGACCTGA TCCCACAAAATTTATCATATTAATTTATATGTTGTACATGCTTGTTGGAAATGCCAATGTTCTATCAGCATCACTTTTGT GAGTGAAGAAGGAACATTATTTTTACACTATAGAAGGGTTGGTAGTTGGGGGGGAGAAATGATAGCTACCTTCCCTCTAT ACCTGTTTAGCCTTTTTGAAGATTATACAACAGGGATGGGGCTTTCTCTGGAGAACCTCAATGTGAATGCCTCATCCTTG TTGTATAATCTTTTTTTTTTGAAGGTTTGTTGTATAATCTTCAATACTTGGTTTATGTTATATATATACATTAGCCTTTT TGGTTCCCCCAGTTCAGTTGGTGTGTGGGGAATCTTATTTGCATTCCCTGCTTATGTACAGACACTCTTCATGACTTTTC GCAAGAAGTTTGTGTTTATCATGTGACCTGGCACATCTCATTCCTGTCCACCATTTCAGTTTTTTTGCTATTTCCGTTGG AGCATTGTTGAATACCCTGCTACAGTACAAGCTAATGCGACTAAGATAGTATTGATAAGTACACAAAATAGGCTTATATT ATATATCTCTATCCATTTCACTCCTTAACTTGCCTTCTTGCTAATGGTACATTCTTATGTGTGCAGTAAAATGTCTCATT CTTCTTCAAGCGTGGAATGCATATTTTCATTCTTCAGTTTGTGTTTGACAATGGAAGGG
CDS sequence (LotjaGi2g1v0398200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCGGGCGTCGGCGACGGCTACCATGGATATGCCGATCATGCACGACAGCGACCGGTACGATTTCGTCCGCGATAT CGGGTCAGGGAACTTCGGCGTCGCCAGGCTCATGAGGGATAAGCACACCAAAGAGCTCGTTGCTGTCAAGTACATCGAAC GCGGAGATAAGATTTATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTCAGGCATCCTAACATTGTCAGGTTT AAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAAAATCCA CAGTGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATTCAA TGCAAATTTGTCACCGGGATCTGAAGTTGGAAAACACTTTGTTGGATGGAAGTCCAGCACTTCATTTGAAGATATGCGAT TTTGGATACTCCAAGTCTTCTGTGCTTCATTCTCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGT ACTGCTGAAGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGTGTAACCTTATATGTAATGCTAGTGGGAA CATATCCTTTTGAAGATCCAGATGATCCAAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCACTGTCCAGTATTCCATT CCAGACTTTGTTCAAGTGTCTCCTGAGTGCCGCCACCTTATCTCTAGGATCTTTGTTTTTGATCCTGCAGAGAGAATCAC CATTCCTGAAATACTGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGATCAAAAGATAATGAGTAACCAATTCGAAG AGCCAGACCAGCCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACTATACCAGCAGCTGGGTCTTAT TCTTTAGATCAGTTTATGGCTGATAACCTTGATATGGATGATGGCATGGATGACTTAGACTCCGACTTTGAACTTGATTG TGATAGTAGTGGGGAGATAGTGTATGCCATATAA
Protein sequence (LotjaGi2g1v0398200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRASATATMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIYENVKREIINHRSLRHPNIVRF KEVILTPTHLAIVMEYASGGELFEKIHSAGRFTEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPALHLKICD FGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGTYPFEDPDDPKDFRKTIQRVLTVQYSI PDFVQVSPECRHLISRIFVFDPAERITIPEILKNEWFLKNLPADQKIMSNQFEEPDQPMQSIDTIMQIISEATIPAAGSY SLDQFMADNLDMDDGMDDLDSDFELDCDSSGEIVYAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 96 | 96 | 2.1E-37 | – | |
PANTHER | 7 | 352 | 346 | 3.8E-212 | – | |
PANTHER | 7 | 352 | 346 | 3.8E-212 | – | |
SUPERFAMILY | 19 | 312 | 294 | 2.7E-85 | ||
SMART | 21 | 277 | 257 | 4.0E-101 | ||
ProSiteProfiles | 21 | 277 | 257 | 48.485 | ||
Pfam | 21 | 277 | 257 | 7.7E-72 | ||
ProSitePatterns | 27 | 50 | 24 | - | ||
Gene3D | 97 | 285 | 189 | 4.3E-62 | – | |
ProSitePatterns | 136 | 148 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0398200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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