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LotjaGi2g1v0398200.2

Overview

Field Value
Gene ID LotjaGi2g1v0398200
Transcript ID LotjaGi2g1v0398200.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G66880.1 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3; Swiss-Prot: sp|Q39193|SRK2I_ARATH Serine/threonine-protein kinase SRK2I; TrEMBL-Plants: tr|A0A1D6Y9D0|A0A1D6Y9D0_9FABA Open stomata 1; Found in the gene: LotjaGi2g1v0398200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:89522356..89527093) extracted from Lotus japonicus Gifu genome v1.2.

ATGGATCGGGCGTCGGCGACGGCTACCATGGATATGCCGATCATGCACGACAGCGACCGGTACGATTTCGTCCGCGATAT CGGGTCAGGGAACTTCGGCGTCGCCAGGCTCATGAGGGATAAGCACACCAAAGAGCTCGTTGCTGTCAAGTACATCGAAC GCGGAGATAAGGTTAGTACAGTATAGTCAATCAATCACCATATTCATATTGTCCCAAAAAAACGAGGTTTGCAGATTTTT TGGGATAAAGGAACTGGAAAAGTGGAAATGAATCACATGTTCATTTTTGTTGTCTGATATTTATTGACGCTGACGTGTGA TGCTTCTTTGGAGGACCATGTTTTGGGTTTCCATTTTTGTTTTGGTGCTAATGGAAGTTTTATTTTTGTTTCTTTCAATA ATAGCTTTTTTTTTCTCTCTTGCTGTTTTGTTAGTTAGTTTCGGTGATGTCAGATTGTTGAATATGGAAAATTTTCCAAG CTCAACTCGCATCTGAAGTCAATAATCAGTTAATAATGCATTTTGTAGCATGAATGAGCTGTTTCCTGTTATGGAAATGA GAGAAAACAGTGACGAATTCAAAGCTTGCACTCTTTTGGTTTTCTTGTTGGAGCACTAGATTAAGAATTTTGGGCGTCAT ATAGAAAACCATTGGTATGCTTTTACCAAATAGTTTAAGTTCATGTTATTGTGTATGGCAGATTTATGAAAATGTTAAGA GAGAAATCATTAATCACAGGTCTCTCAGGCATCCTAACATTGTCAGGTTTAAGGAGGTTGGTATATTTTTATATATCTTT TTTTTTCAGACGAAGGAATGAAGGATATTATATTTACGGAGAATGTTCTATGAAATTTTGCTCAGGTCATTTTAACACCT ACTCATCTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAAAATCCACAGTGCAGGGCGTTTTACTGA GGATGAGGTTTTTATACAATTTATTTACTTTTCTGACACCATTCATAGAGAAAAAAAGTTACTTGTATTCTGTTTCCTGT TTTACTAGTTAACCCGTTGTTAATTTGCAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATTC AATGGTAATTGAACTTCTCTCCCTCCCCCAACATCTGATCTTATAGGTCTAAGTATGTATAAGTAATGTATCGATCTTCT GAGTATTGTCTAATGTATATTATATCTCCTCATGAAGCAAATTTGTCACCGGGATCTGAAGTTGGAAAACACTTTGTTGG ATGGAAGTCCAGCACTTCATTTGAAGATATGCGATTTTGGATACTCCAAGGTAAGGATTTCTTTGTCTCACTAGCCTTTT GCATTCATGGTGTGAGTTCTGTATATATTTTACTAGGATGTGTGCGCTGTAGTTGACTAACTTTTCCTTTAATTGGTGAT TTTGTCAAAAAAAATACTTATTGCACATTTGTGGCTGCTATTTAGGCTCCTTCGAAAACTAGCATGCCTCCAAGTTACTT CCTGTATCTGGTTGCTCTTTAACTTTTCTTGTGAATCTCTTTTCAAAAGATTTTTTCAGTAATTTCTGTAATTGGTAAGG GACAATTGTTAATGACTATTTATTATGACAGGAAACTAGCGGCATCTCATGATTTCTCTGTTTCACTTGCACATCTTTGT GGTGTTGTTAAGACAATTGAACCTGTATTTGTGTCATATTTTATGGTGCATAGTAAATGTGCAGTTAAAATGGAACTTCC CATGTCCATGCAATGATGCCTAAAGTCCTTAATTTTTCTTTTACCAATTCAATTTTCATCTGGCTTGTAAGCAGTGACGG ATCCAGAAATTTATTGTTGTGAGGGCAATATATACATATAAATTCGTATAAAAAAATTTAATTTAATTATATTACTAGAA GTGAGTGCATTTTTTACCAAATAAGGGACACAAGTAAATACATTTTTTACCAAAGAAGTCTTAAAAAACCACATACTTTT ACCACTCAAGTGAGGACATTTACCAATGTGGAATACAAGTGAGGGCATTTAGCAATGTAGAACACAAGTGAGAGCATTTT TTATCAAAAGAGTCACAAAAAACCACATACTTTTACTGTACAATTTTTTTCTAATGATTTTTTTAAAAATTTAAGTGAGG GCACATGCCCTCATGCTGTTCTACCTAAATCCGTCACTGCTTGTAAGCACCTAAATATTCATTTTACAAGCTAATTTGGA ACTTCTCAAGTATAAATCACCATTGGAAATCTAATAGATTTTTATCTGGCTTGTAAGCAGTCTTCTGTGCTTCATTCTCA ACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTACTGCTGAAGCAAGAGTATGATGGCAAGGTAGAGT ACTTGGTTTCTTGGTCTTGTTCTTTTACTGTATTATTACAGTCATAATTTGATAGTAATTATTTACGGGTTAGTGAGTCC TGGTATAAGAAGCTAAAGCAGTGATATTCTGGTAGTCTGTCTGTTCTGACCTACTCCAGTGGTAATATTTTTCTGGACTA TGAACTAGGAATGGTTTTCTCTTCTGGTTGTCATGCTGATGCAATTCATGTTTTCTTGGCACTAGTTAATCTTCTCTCCT TTCATGAACTTAAATCTCTACTTTTATTAACGAAAAGAGGGTGAGAGTTAATTTGTATCTTGCACCTTTTTATTCCTTAA GTTCATAAGGTCCATATTTTGTTGCAATTAGATAATGATTGACCATTCCCCTCCACTCTTCCTTTTTTGCATGCCCACTC TTCCTCCCTTAGTCCTTTTTTTTTCATACTTAGATTTTAGAACGTATTCACATGTGACAGCGTACACACTTGTAGTTGTA AGAATGCTTTGTAATTTTTTAATCTGCAATATCACTAGTTAAGCACCTACAAATAAGCTTGTATTCTTGAGCCCTGCCCA TTTGGGTTGGTGGTGTGATGAGTTCGGATTGTGCTCTGGGCAAATATTTCTGTTTTTAATGTTGCCAATATGTATATCGA GTATCTTATTGTGTTTCCACTATGCTACCATGCATTTAATCAGATTGCAGATGTCTGGTCATGTGGTGTAACCTTATATG TAATGCTAGTGGGAACATATCCTTTTGAAGATCCAGATGATCCAAAGGATTTCCGGAAGACAATTCAGGTTGTTCACCTA TATTAAGCTTTTTGCATCTTTTTCTTCATGATGAGCATCTGATTGCATTACCTTAAGTGTTTTGCTTGGTTCCTTGCAGA GGGTTCTCACTGTCCAGTATTCCATTCCAGACTTTGTTCAAGTGTCTCCTGAGTGCCGCCACCTTATCTCTAGGATCTTT GTTTTTGATCCTGCAGAGGTATTTCTGTTTTCCAATAGCTCCCCTACTGAACCTAATTTCTATTATTTGACACATGCTAT ACAATTCTTGAGGAGTTTTGTCAATAGATGCATTTTATATAGTATATACTACTACTCTACCTTGGCTTAGAATCCACTAA TAAATAAACTGAGTACTTTTTGATACTGTCTTGATAAACCTAGAGTTTTACTCTAAGACGAAGTTCTCCTTTGACACGAG TTTCAAATACTCTCTGAATTTGTAAAAATCGCAATATTACTATTAACTATTCAAAAACCTAATTTACATAAGACATCTAA AGGGTAGTAGCCTGAACTTGGGAATTTGCCTTCTCAGTGGAAGTGATATTTTAATATTTTCCTTTTACATTGTCCGGGTC CAGAGCTGCTTTGATTGTGTATTAGCATTGTTAATAATATTTTGTAGGCACAGCTGCATCAGTCACTATAAATTAAGAAA TTGTAATATTAGACAACAGCAAAAAATGTTCATTGCATATTATGAACTATGAAGATTGAGCTCTTCTTAGCCGTTTTCGT TGCCAAAACCTGCACGTCAGACACTTCTTAGACGTTTGCTTAAACACTCAAATATGATTTTGGGAGACATGACACTTATA AAATTATTTTATTTTAGTGTATTTTAAATTATTCAAAAGTAATTTAAAATATGTCTAAAAAGTTAAAAGTAAAACCTGAA AACATTTGAGGAACTTCATTTGGTCCACACAACGATGATCATTTTGTTGTCCACGGCTCCACGCATGTATACATACATAA TAAGGGGCATATCATGATATCAAGTGAACATAATAAGTGACCAGCTAATTTTGACCACATAACCATACATGAATGATCTA TATTAGCTCCTCTCAAACTAATTTGTCCATTCACATGTTGCATGTGATGTGCACACACACTGTATCTCACAATCACACGC ACTCCACACATGTTTTTGTTTGTGCTTCATATATTATGAGTCCAACCTTTTGCTTATACAAGGTTTAAACTTTACTCACT ATGCCTAATTAATTCGTTCATTTTGAACCTTATGCCTTTGGACGTCAATGTGGCAGAGAATCACCATTCCTGAAATACTG AAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGATCAAAAGATAATGAGTAACCAATTCGAAGAGCCAGACCAGCCCAT GCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACTATACCAGCAGCTGGGTCTTATTCTTTAGATCAGTTTA TGGCTGATAACCTTGATATGGATGATGGCATGGATGACTTAGACTCCGACTTTGAACTTGATTGTGATAGTAGTGGGGAG ATAGTGTATGCCATATAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0398200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCGGGCGTCGGCGACGGCTACCATGGATATGCCGATCATGCACGACAGCGACCGGTACGATTTCGTCCGCGATAT CGGGTCAGGGAACTTCGGCGTCGCCAGGCTCATGAGGGATAAGCACACCAAAGAGCTCGTTGCTGTCAAGTACATCGAAC GCGGAGATAAGATTTATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTCAGGCATCCTAACATTGTCAGGTTT AAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAAAATCCA CAGTGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATTCAA TGCAAATTTGTCACCGGGATCTGAAGTTGGAAAACACTTTGTTGGATGGAAGTCCAGCACTTCATTTGAAGATATGCGAT TTTGGATACTCCAAGTCTTCTGTGCTTCATTCTCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGT ACTGCTGAAGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGTGTAACCTTATATGTAATGCTAGTGGGAA CATATCCTTTTGAAGATCCAGATGATCCAAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCACTGTCCAGTATTCCATT CCAGACTTTGTTCAAGTGTCTCCTGAGTGCCGCCACCTTATCTCTAGGATCTTTGTTTTTGATCCTGCAGAGATAATGAG TAACCAATTCGAAGAGCCAGACCAGCCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACTATACCAG CAGCTGGGTCTTATTCTTTAGATCAGTTTATGGCTGATAACCTTGATATGGATGATGGCATGGATGACTTAGACTCCGAC TTTGAACTTGATTGTGATAGTAGTGGGGAGATAGTGTATGCCATATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0398200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDRASATATMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIYENVKREIINHRSLRHPNIVRF KEVILTPTHLAIVMEYASGGELFEKIHSAGRFTEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPALHLKICD FGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGTYPFEDPDDPKDFRKTIQRVLTVQYSI PDFVQVSPECRHLISRIFVFDPAEIMSNQFEEPDQPMQSIDTIMQIISEATIPAAGSYSLDQFMADNLDMDDGMDDLDSD FELDCDSSGEIVYAI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
1 96 96 1.9E-37 –
PANTHER
PTHR24343
6 264 259 6.3E-194 –
PANTHER
PTHR24343:SF387
6 264 259 6.3E-194 –
SUPERFAMILY
SSF56112
19 272 254 3.91E-79
IPR011009
SMART
SM00220
21 271 251 4.1E-89
IPR000719
Pfam
PF00069
21 264 244 1.8E-66
IPR000719
ProSiteProfiles
PS50011
21 278 258 44.188
IPR000719
ProSitePatterns
PS00107
27 50 24 -
IPR017441
Gene3D
G3DSA:1.10.510.10
97 273 177 1.1E-55 –
ProSitePatterns
PS00108
136 148 13 -
IPR008271
PANTHER
PTHR24343:SF387
265 329 65 6.3E-194 –
PANTHER
PTHR24343
265 329 65 6.3E-194 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0398200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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