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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0404400 |
| Transcript ID | LotjaGi2g1v0404400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycosyltransferases; TAIR: AT5G67230.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9FH90|IX14H_ARATH Probable beta-1,4-xylosyltransferase IRX14H; TrEMBL-Plants: tr|A0A0L9UQJ5|A0A0L9UQJ5_PHAAN Glycosyltransferases; Found in the gene: LotjaGi2g1v0404400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90140145..90144809) extracted from Lotus japonicus Gifu genome v1.2.
CCAGTCTCTTTGTAAAACTTCATTTTCTTCTGAATTAATTATCCAAACTGAAAGTTGTTAGAACAATTAAAAAGAGAAGA AGCAAATTAGATTATCCTTAAACCCAAAGTAATGTTAGATGATTAAATCACAGCACCACCAAACCAACCAAAATCCTTCC TTTCCCTTCAAAACGTTACAAACTTCAATTCAAAATTCAAAGCAAACTCAATACATAAACAATAAATACTACCTGCATTT CAATTCACAAACCTTACACACACACAGATGAAGCTCTCGGCGTTGCAGCAGAGCTACCTCAACCGCCGCGCCAACAGCTT CAGAGGAGCACCGCAGTTAGATGGTTCCGGCGACGGCGCCGTCAAGTCGCCGGCAACAATATTCTGGCTCGTCCTCCACG GCGTCTGCTGCCTCATTAGTCTCGTCCTCGGCTTCCGCTTCTCTCGACTCGTCTTCTTCTTCCTCTTCTCCACTTCCGCC ACCAACCTCTACACTGTCCCGTTCCGCTCCGGAGGAGCGGACATCACCGTCCCCGTCGACGCTCGCTCGACTCCCGCCGT GAACCGGACTACTGTCGTGGCTAGCAGGGTGGTGGTCGGGCGGCACGGGATCCGAATCCGGCCGTGGCCGCATCCGGATC CGGTGGAGGTGATGAAGGCTCACCGGATAATTGAGAGGGTTCAGAGGGAGCAGAAGGCTTTGTTTGGGGTGAAGAACCCT AGGACGGTGATCGCCGTCACGCCGACCTATGTGCGGACGTTTCAGGCGCTTCACTTGACCGGCGTGATGCACTCGTTGAT GCTGGTGCCGTACGATCTGGTGTGGATCGTGGTGGAGGCCGGAGGAGTCACCAATGAAACCGCTTCCATTGTTGCCAAGT CTGGGCTCAGAACCATCCACATTGGCTTCCATCAGAAGATGCCTACTTCATGGGAAGCTCGGCATAAACTCGAGTCTCGT ATGCGTCTTCAAGCTTTGAGGTCAACTTTTAGTCATCGAAATTTCAATATCTATCTGCTTTCACTATTGAGTATCATTCT AGATTTTCTAGTTAGTGCCTAAGACACAATCACAAAATCAGTGTTTTTTTGCTTTGATGGTTGTCATTGTCCTTACATGT AATGTTTTGTTATATGGTGGAACAGAATTGTGAGGAAAGAGAAGCTGGATGGAGTTGTGATGTTTGCTGATGATAGTAAT ATGCATAGTATGGAGTTGTTTGATGAGATTCAGAGGGTGAAATGGATTGGTGCTGTTTCGGTTGGGATACTTCTTCATTC AGCTGATGCGGGCGAGTCTTCGTCAGGGGAGGGGGAAGCTTCCCTGATCCCTGTGCAAGGTCCTGCTTGTAATGCTACGG ATAAGTTGGTTGGGTGGCACACTTTTAATTCATTGAGATATACGGGAAGAAGTGCGGTTTATATTGATGACAGGGCGCCT GTGCTGCCCAGAAAGCTTGAGTGGTCTGGGTTTGTGTTGAATTCCAGGTTGCTTTGGAAAGATCTTGGTGATAGACCAGA GTGGATTAAGGATCTTGATGCGGTTGATGAGGGGATAGAGAGTCCACTGTCGTTGGTCAAGAGCACCTCTGCGGTAGAGC CACTTGGGAATTGCGGACGCCAGGTTTTGCTTTGGTGGCTGCGGGTTGAAGCTCGCACTGATAGCAAATTCCCTGCTCGG TGAGTTCTCTCCTCTTGATTTTAGATATTCATTTATGTTGCTCTAAGTTTCATTTTCCAACTGATTTATAACCTTAGGAA TAGCTGCATACTTGCATTGATACTTGGGCATCATGAGAAGTAGACTCATGTTCTAGGATGATTCATAGTTGTTCACAACA AAAGTCCTAACGATAGAGCTTAGCTAGTTGGATGCCCCGATAGTAGTCGAAATCAGGGAGGAGGTTGTATATCACAAATC ACTAAATTGCAATTTAATCGTAAGATTTAGCAGATTTAGCTATTCTTAAATATATTAACGCATATAAATTCTTATATGCA TATAAAATAGCATATAAATTAATAGAAATGTCATACATAAGCACTATAAAATTTAGAAAGCATAAAACATAAACATCCAG CTCAAGTTAGGAAATTTGCGACATTAAAATAAAGAATAGGGAGCTTCAAGCAGAGAAAAGGGAGGAAGAAGAGGCGTCGC AGGGCGTCGCCACCAGTGGCCGTCGTCGCTTCCTGTGGAGCCCTTGGTCGAAGTCGCCTCTGGTTCTGGAGGAGGTGAGA CGCAAGTGACTCGTAATGTCGTATGAGAAGCTGTCTCAAACTCGTAAAAATTTTAAGGTTTTTCTCACCTGGTTCCTGCA CAAACAGGTCAAAACTCGTTAAATTTTGAATCTTCCTAAATTGTAAAATCTCATCAAATCTCAATTTTGGTCCAATTTAG CGATTTCTGGGTGATTTATCAAGAAAGAGATTTAGCAAGCGATTTAAATCGCTCAGGGGTTGCAGATTGTAAATATTTAC CATTTAAATCGTGATTTTTCCTACCATGGATACGTGTGATGAGACTTGCGAGAATCATGCAGATAATCAAACCATCCTTA TGCAGCACTTGGTACACTCCTTATTCCTTATAGAGTTGATAGACCGAGCGGATAGCAGAGCTGATTCAGTCGATTGGGAC CTAGCCACGCACCCCTATTAATTGTAATAAATGCCCATTGTGGGGGCGATAAATCCAGCCGACCAGTATATCAACGTGAT ATAACAGTCCAATAGTGTTCCAGCTTAAGATGATCCAGCTAAGATGAAGCACCAGCTAAGATGATCCAGTCCAAACTGAG AAAAGAAGAAGCTAAGAAAGCAAACTGCTGCAAAATTGAGGCAGAATCGTTCTAGATATCGTATACTAGTATATTACTAT AGTTGTTAACCATCTAGTAATATTTTTGTGCTGGCTGAGAAACTGAAAGACTCAATGGCAGTGGCTACTAAGTGTGCTTC CCTTCCCTTTTGTGAATATTCGCCTTATATAGATGGATGAGGGAGGGTTCCCACTTCCCATTGCATGCAAGGTTACTGGG TGTAAGTGTTGAAACTCAAAACTGCAATGCAGGGTTGAGGGAGGGTTCCCACTTCCCATTGCATGCATTTTGGTTGTATG ATTATCTGGAGTATGTTGGGGTGTAGATTGCAAGCTTTTCAAGTCATCTGGATCTGTCTGAACTGAAAGTACCAAAATTA TCACTAGGATGTTGGAGACTTGGAGTACTAGAGAGCTACACTCTATAATTTCAGCCTGCTTAATCAATATAAATTGATTT AATGATTGAATTGATACTAGGAACACCACTAGCACCAAACTGCAGAAAAAATGAATTCCTTTCAGTCCTTGTATTATGTA TGAAATCAATAGTAATAAACTAATAATCATGAATTAACTCTTAGTAGTAAGCTTGTGCAATAGCTCCCTACCAGAGGTGC CTTTATTTCCCTAAATTGGTGATTTCATTTCCCATTAAATGCCAGCAATTAAATGACATATCCATGTAAGTTTCTGCCCT TAGATGGACCTCTAGATGAAAGGCCACATAACGCCAAATAGAACAACATGCTGGTGAAGTTAAGTGGAAATTTGTTGGAC GTTGGTTAGTTACTAATAGATCATAGACTTGAGCCAGATCATCCCAATTCCCAAGGGTTGTTATGAATGTTTGGATTAGA ATCTTTGCATCCTTATCCTAAAATAGTGCATGGATTTATGTATTCTCTAAACTTGTTTATTGCCATATTTTCTGCTCATA ACACTGACTTTATGATGCTATTCCATGCAGATGGATCATTGATCCTCCTTTGGACATCACCGTCCCATCAAAACGCACTC CATGGCCAGATGCTCCTCCTGAGCTCCCATCGAATGAAAAAGTGTTCACCGGCACAGAAGAGCAGACGAACAAGCACACT ACAAAGATCAAAACAACCAGATCCCGACGCAGTAAAAGTAAGAGAAAGCATGAGACCAAAGTGATTGGTGTGCAAGTCTC TACACATTCTGAACAAAACTGAGATGGGAATTTGCACATCTGAGGAATTTATTGCCTTGTGTATACAAAACTGCTGGCCT TTCGCAACAAGAATTTGGACTTTGATCAAATGAAGAAGCTGATATCTTACTGAAGATGCGTAATTTTTATGGTTGCCAGC ACATGTGCATTAGAGTATGAGATTTCACCCATTTTTTCTTTTTACAATTTTTTCTTCTTTATGTTGGGGGTGCCATATAC CCGTTCGCTTGAGAGATTGAAAGGTAATGTGATCTTAGTTTTGCAGCAGTTGCTTGCTGCCTTGCAGGAAGTGTATTCAA TTTTATTCCATGTTAATAGATATTCTTCTCAATAGTTATACATCTTTGATTCTTTCACACGCAGATTTTCGTTACTTGTA GAGAGGTATATAGTAATAAAAAACTAAGTCCAGAGGTTCTGGATCCTACGAAACAATCCCAAGCAAGTACTATCCACAAC AACGATAAATAAATTTCACGTCTTCTTTTTTTCTTTTGCCCAAAGAGATACACAAGGTAAAAGAACAACAAAGTAGTCCC TGGCCCAACCACCCTACATTGTTCTGTTCAGACTTCAGAGTATGATCCCTGTGTTTGACAAAAAAAAACGAGTATGATCC CTGTGCTTCGGGCACACAAGAACTG
CDS sequence (LotjaGi2g1v0404400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTCTCGGCGTTGCAGCAGAGCTACCTCAACCGCCGCGCCAACAGCTTCAGAGGAGCACCGCAGTTAGATGGTTC CGGCGACGGCGCCGTCAAGTCGCCGGCAACAATATTCTGGCTCGTCCTCCACGGCGTCTGCTGCCTCATTAGTCTCGTCC TCGGCTTCCGCTTCTCTCGACTCGTCTTCTTCTTCCTCTTCTCCACTTCCGCCACCAACCTCTACACTGTCCCGTTCCGC TCCGGAGGAGCGGACATCACCGTCCCCGTCGACGCTCGCTCGACTCCCGCCGTGAACCGGACTACTGTCGTGGCTAGCAG GGTGGTGGTCGGGCGGCACGGGATCCGAATCCGGCCGTGGCCGCATCCGGATCCGGTGGAGGTGATGAAGGCTCACCGGA TAATTGAGAGGGTTCAGAGGGAGCAGAAGGCTTTGTTTGGGGTGAAGAACCCTAGGACGGTGATCGCCGTCACGCCGACC TATGTGCGGACGTTTCAGGCGCTTCACTTGACCGGCGTGATGCACTCGTTGATGCTGGTGCCGTACGATCTGGTGTGGAT CGTGGTGGAGGCCGGAGGAGTCACCAATGAAACCGCTTCCATTGTTGCCAAGTCTGGGCTCAGAACCATCCACATTGGCT TCCATCAGAAGATGCCTACTTCATGGGAAGCTCGGCATAAACTCGAGTCTCGTATGCGTCTTCAAGCTTTGAGAATTGTG AGGAAAGAGAAGCTGGATGGAGTTGTGATGTTTGCTGATGATAGTAATATGCATAGTATGGAGTTGTTTGATGAGATTCA GAGGGTGAAATGGATTGGTGCTGTTTCGGTTGGGATACTTCTTCATTCAGCTGATGCGGGCGAGTCTTCGTCAGGGGAGG GGGAAGCTTCCCTGATCCCTGTGCAAGGTCCTGCTTGTAATGCTACGGATAAGTTGGTTGGGTGGCACACTTTTAATTCA TTGAGATATACGGGAAGAAGTGCGGTTTATATTGATGACAGGGCGCCTGTGCTGCCCAGAAAGCTTGAGTGGTCTGGGTT TGTGTTGAATTCCAGGTTGCTTTGGAAAGATCTTGGTGATAGACCAGAGTGGATTAAGGATCTTGATGCGGTTGATGAGG GGATAGAGAGTCCACTGTCGTTGGTCAAGAGCACCTCTGCGGTAGAGCCACTTGGGAATTGCGGACGCCAGGTTTTGCTT TGGTGGCTGCGGGTTGAAGCTCGCACTGATAGCAAATTCCCTGCTCGATGGATCATTGATCCTCCTTTGGACATCACCGT CCCATCAAAACGCACTCCATGGCCAGATGCTCCTCCTGAGCTCCCATCGAATGAAAAAGTGTTCACCGGCACAGAAGAGC AGACGAACAAGCACACTACAAAGATCAAAACAACCAGATCCCGACGCAGTAAAAGTAAGAGAAAGCATGAGACCAAAGTG ATTGGTGTGCAAGTCTCTACACATTCTGAACAAAACTGA
Protein sequence (LotjaGi2g1v0404400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSALQQSYLNRRANSFRGAPQLDGSGDGAVKSPATIFWLVLHGVCCLISLVLGFRFSRLVFFFLFSTSATNLYTVPFR SGGADITVPVDARSTPAVNRTTVVASRVVVGRHGIRIRPWPHPDPVEVMKAHRIIERVQREQKALFGVKNPRTVIAVTPT YVRTFQALHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASIVAKSGLRTIHIGFHQKMPTSWEARHKLESRMRLQALRIV RKEKLDGVVMFADDSNMHSMELFDEIQRVKWIGAVSVGILLHSADAGESSSGEGEASLIPVQGPACNATDKLVGWHTFNS LRYTGRSAVYIDDRAPVLPRKLEWSGFVLNSRLLWKDLGDRPEWIKDLDAVDEGIESPLSLVKSTSAVEPLGNCGRQVLL WWLRVEARTDSKFPARWIIDPPLDITVPSKRTPWPDAPPELPSNEKVFTGTEEQTNKHTTKIKTTRSRRSKSKRKHETKV IGVQVSTHSEQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | - | – | |
| PANTHER | 3 | 475 | 473 | 7.3E-223 | ||
| PANTHER | 3 | 475 | 473 | 7.3E-223 | – | |
| TMHMM | 36 | 58 | 23 | - | – | |
| Phobius | 38 | 58 | 21 | - | – | |
| Phobius | 59 | 492 | 434 | - | – | |
| SUPERFAMILY | 151 | 425 | 275 | 8.44E-71 | ||
| Gene3D | 151 | 417 | 267 | 7.6E-48 | ||
| Pfam | 173 | 406 | 234 | 3.4E-58 | ||
| MobiDBLite | 429 | 492 | 64 | - | – | |
| MobiDBLite | 461 | 476 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0404400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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