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LotjaGi2g1v0406500.1

Overview

Field Value
Gene ID LotjaGi2g1v0406500
Transcript ID LotjaGi2g1v0406500.1
Lotus japonicus genome version Gifu v1.2
Description Phosphatase 2C family protein; TAIR: AT4G33920.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|O81760|P2C63_ARATH Probable protein phosphatase 2C 63; TrEMBL-Plants: tr|A0A151SCD7|A0A151SCD7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0406500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:90365230..90368061) extracted from Lotus japonicus Gifu genome v1.2.

CATAAGTCTCGGTCTCTAGTGATACTTTTATTTTCTTAATCACCAAGAGTACTTCTCCTTCTGCACAAAGAAAAGGATAA TTATATCTTGTGTGGAGAGGTGGAAGAAGAGAGAGATAGAAAGAAAGGAGAGAGAAAGTAAAGATGTGATATGTGATTTG ATTGATAAAGAAGAGAAAAATAAAGAGAATGGAGGTGAAAAAGAAGTGGAGAGATTTGTATATATCATAACTCCAAAGAA AAAGTCTCTCTACTCAGTCATAAATAACTTTACCACTCTACAGTTTCGTTCTACTTGTTTTTTTCCAAGCACTGACGCGG AATTCACACGTTCCGCTCCTCCATACTCTTCTCCATCCCTCAATTCAAGGCGTCACGCGTTCTTCACCTCCTCCTTTTTC CAATCACGTATCAGGACCACATCAGAGGGACAGATACAGAGGAAACAGAGGGTTAATTAAGGATGTTGGAGCTGTGCCGC TGGCCACTGGACATGTGCTTCGGCGGTGGTGGTGGCAACGATGGCAGCCTTCAGTGGCACATGGACTCGAAGCCCCATCA CTATTCAATTGCAGTGGCACAAGCTAATTCGTCGTTGGAAGACCAAGGACAGGTTTACATCTCTCCCTCTGAAACTTTTG TTGGCGTGTACGACGGACATGGTGGACCTGAAGCTTCCCGTTTCATCAGAAACAATCTCTTCTCCTTCCTTCACAGTAAG ATAAACCTCTGAATTGTGAAACACATATTTTTTTTCTATCAATTTTTAGCTAATTTTTCAATTCTCATGTGAACAATGCT AAGAAAACATGGACAATTCAAAATAGCAGTAGTGGTATTGAACTTGATTTACAGTAGATATTTTACATTGGCACACATTT TGTCTGAGTCATTAAGGATGGATCACTTCTCCTCCTAAGGTTGTGTGTTTCGATTTTCACCCTCGATGTAAGGACGGTGT TGATGTGCGATCTTTTAGTATGTGACCTTGTGGCCATGGTTGTGACTGGAGCCGAATGCACACAAACTTTTGCATTCATA GAAACAAATTACATTCAATTTTAGCTATATTTTTAATTTATTTTGTTAAACTTGTACCTTTATACTGATACATAAGATAA ATAATTAGCTAGTCTTACATAAGATGAAAATGGTTCTCCTTCCTTGGCAGAGTTTGCTTCAGAGGAAGGTGGTTTGTCAG AGCAAGTGATAAAGAAGGCATTCAGTGCTACTGAAGAAGAGTTCCTGCACTTGGTGAAGCAGTCTTGGACTAAACGGCCA CAAATTGCTTCTGTGGGTTCGTGCTGTCTTCTGGGGGCGATTTCAAAGGGTGTTCTTTATGTTGCTAATCTCGGCGATTC GAGGGCGGTTTTGGGGCGGAAAGCATTTGGAGAGCAGGGGAATTGGGCTCCTGTGGTGGCGGAGCGTTTGTCCACTGATC ACAATGTTGCAGTGGAGGAAGTCAGAAAGGAGGTGGAGGCACTTCACCCTGATGATGCGCACATTGTGGTTCGCACTCGT GGAGTTTGGCGAATCAAGGGCATTATTCAGGTAACTTTTATATTGAGCTTTAACGTTAATGTTTCACATTGACTAGAAAT ATAGTATAATAAGTATTATAAATGGGAGGGCAATCATCCGTTTATTGGAAACCACTTGTACATGAGCAATCTGCAGATGT TCATTCCTGTAAAATTTCAGGCTCGAGATAGTTTGTTTCTTACCACTGTGTTCTGTGATTCTGTTCCATTTCTTACAATT TACAAATGAATTCACTTCCAATTTTTTCTCAAATGAATGATAAACTTCAAATAATTGCGTAGCATATGTCATTCTGGAAC TTCTGTTTAAATTATAAACTTGAATTAGTTGCACATTTTGAATCAGGAGTTCCTTAACTGTGTTTTAGGTCTCAAGATCA ATTGGGGATGTTTATCTAAAGAAACCGGATTATGACAACAATCCTCTGTTCAGACAATTTGTATATCCGGTATCTCTGAA CAGACCTGTAATGACAGCTGAACCATCCATATTGAAGCGGAAGCTGAAAGTTGAAGACTTGTTTTTAATCTTTGCATCAG ATGGACTTTGGGACCATTTAACTGATGAAGCAGCAGTTGAAATCATCTCCAGAAGTCCAAGAACAGTGAGTTCTCATGTT TATCTAAATTAGCATATGAAATAGTGTTAGTTAGTGGTCTTTTTGTTCAAATCACATTATACTGTATGAAAAAAGGTTTA AACTTGAGCTTCCTTTGCAGGGAATAGCAAAACGATTGGTGAGAGCTGCACTGGAAGAGGCTGCAAAGAAAAATGGAAAG AGATATGAGGATTTAAAGAGAATTGAGAAAGGTGTTAGGCGCCTTTTTCATGATGATATTACAGTGATTGTTCTATACCT TGATAATTCACTAGGATCTTTAAATAGTTCAAGACATCAAGGGGTCTATCGTTGCATTGATACTCCTGTTGATATCTTTT CTCTCAGAGCAGATGAAGCAAACCGATAACCAAAGAATGCTGTTGTAAATGTGATTTAAACTAGCATATGAAAGTTGACA ATGCTGGTAATGTTAGGTGGTGCTGCACAAGCGGAATTAAAATATTCCATCTCCAAATTATGTCTCTTTGTATGTCCCAT AAATCAAATTTTGTGGAAAAAGAAAATACTCATATCAGCAAGAGAGGAAGCTTCTTTCATTTCGTTGATAGGGTATTGTG ATGATTGGATTTTATTTAAAAGTAAAAAAAAAAGTTTTTGGATTCTTAAGTTATATACTATGCAAATGGGAATTTTTCAG AACTTGTAAATTCAGTAATTTTTTAATCTAGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0406500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGGAGCTGTGCCGCTGGCCACTGGACATGTGCTTCGGCGGTGGTGGTGGCAACGATGGCAGCCTTCAGTGGCACAT GGACTCGAAGCCCCATCACTATTCAATTGCAGTGGCACAAGCTAATTCGTCGTTGGAAGACCAAGGACAGGTTTACATCT CTCCCTCTGAAACTTTTGTTGGCGTGTACGACGGACATGGTGGACCTGAAGCTTCCCGTTTCATCAGAAACAATCTCTTC TCCTTCCTTCACAAGTTTGCTTCAGAGGAAGGTGGTTTGTCAGAGCAAGTGATAAAGAAGGCATTCAGTGCTACTGAAGA AGAGTTCCTGCACTTGGTGAAGCAGTCTTGGACTAAACGGCCACAAATTGCTTCTGTGGGTTCGTGCTGTCTTCTGGGGG CGATTTCAAAGGGTGTTCTTTATGTTGCTAATCTCGGCGATTCGAGGGCGGTTTTGGGGCGGAAAGCATTTGGAGAGCAG GGGAATTGGGCTCCTGTGGTGGCGGAGCGTTTGTCCACTGATCACAATGTTGCAGTGGAGGAAGTCAGAAAGGAGGTGGA GGCACTTCACCCTGATGATGCGCACATTGTGGTTCGCACTCGTGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAA GATCAATTGGGGATGTTTATCTAAAGAAACCGGATTATGACAACAATCCTCTGTTCAGACAATTTGTATATCCGGTATCT CTGAACAGACCTGTAATGACAGCTGAACCATCCATATTGAAGCGGAAGCTGAAAGTTGAAGACTTGTTTTTAATCTTTGC ATCAGATGGACTTTGGGACCATTTAACTGATGAAGCAGCAGTTGAAATCATCTCCAGAAGTCCAAGAACAGGAATAGCAA AACGATTGGTGAGAGCTGCACTGGAAGAGGCTGCAAAGAAAAATGGAAAGAGATATGAGGATTTAAAGAGAATTGAGAAA GGTGTTAGGCGCCTTTTTCATGATGATATTACAGTGATTGTTCTATACCTTGATAATTCACTAGGATCTTTAAATAGTTC AAGACATCAAGGGGTCTATCGTTGCATTGATACTCCTGTTGATATCTTTTCTCTCAGAGCAGATGAAGCAAACCGATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0406500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLELCRWPLDMCFGGGGGNDGSLQWHMDSKPHHYSIAVAQANSSLEDQGQVYISPSETFVGVYDGHGGPEASRFIRNNLF SFLHKFASEEGGLSEQVIKKAFSATEEEFLHLVKQSWTKRPQIASVGSCCLLGAISKGVLYVANLGDSRAVLGRKAFGEQ GNWAPVVAERLSTDHNVAVEEVRKEVEALHPDDAHIVVRTRGVWRIKGIIQVSRSIGDVYLKKPDYDNNPLFRQFVYPVS LNRPVMTAEPSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNGKRYEDLKRIEK GVRRLFHDDITVIVLYLDNSLGSLNSSRHQGVYRCIDTPVDIFSLRADEANR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF711
15 368 354 3.6E-158 –
PANTHER
PTHR13832
15 368 354 3.6E-158
IPR015655
Gene3D
G3DSA:3.60.40.10
22 344 323 1.5E-78
IPR036457
SMART
SM00332
30 335 306 2.9E-70
IPR001932
CDD
cd00143
32 337 306 2.87858E-60
IPR001932
ProSiteProfiles
PS51746
33 337 305 42.164
IPR001932
SUPERFAMILY
SSF81606
33 339 307 1.44E-54
IPR036457
Pfam
PF00481
55 308 254 2.2E-40
IPR001932
ProSitePatterns
PS01032
59 67 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0406500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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