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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0409400 |
| Transcript ID | LotjaGi2g1v0409400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT3G49900.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9M2W8|Y3990_ARATH BTB/POZ domain-containing protein At3g49900; TrEMBL-Plants: tr|K7K4Q7|K7K4Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0409400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90641347..90645182) extracted from Lotus japonicus Gifu genome v1.2.
CTCCATGGTAGCAGTAATGAAATAGCACCACTCGAACAGTCTTGAAAACTGTGTGTAGAGAGAAAAAATTGAATTGAATT GCTCAAGGACATTACAGATGAGGGGTTGGAACCAATTCCCGGCTATAGAGACCATCTATGAGGAAGAACATGAGTTCTCC TCCACCTCTTCTCCCTCTCTTTCACCATCATTTTCCTCTTCTCCTCCATCACTCCCCTCCTTAGTAAATGCTTGGTTAGT ACTCATTCTTAATCTCTCTTCTTCCATTCCTTCTAATTGTTCTATTTTTCCTGAAATTTTATATGAATCTATTCAGGTCT CTGGACTCTGGGTGTGAAACGGACGTGTTGATAGGTGTTCATGGAACCTGTTTTCGGTTACACAAGGTATGTTTCATTCA CTAGAGTTATTTTCATGATCCATTGAGATTCAGCTATTGTCACATCGATTCGTCCAAAAAAAAATGCTATTTACACTGCA TAGACGGCTTTTGTTTTGATTAAGCGCATGAATTTTCCTTGTATACGTTTTATCTTGTTGTGCTTTTGGATCAAATTCAT TTGCTGCAAGCCTGCAACTGCAAGAATTGGTTGGGATTGGTGTGAAATGATGACTTAAGGTTATTGTATTGAGCGAGCCT AGAGAAAAGCAATCTAATGATTTGTTTCAATCAACAAGATTAGAAATGATTAATTAGGCATCATTTGTACTACAAGTGGG AATCCAATTAATATGGGTATGGTCTACCAAACAGGCTTTATGAATCTACCAAACCTAGGAGAAAATATCTGCCTTCCCCA ATGGGTATTCTAGCTTCCTACTAGCTCATAACGATTTTGGCATGCAGAAATTAATAGTCACTCAACAACCCTCAGTGGCG CACAGCCCAGAGTGCCAAAACAGGGGATGGTTAGATTCATGAGTTTAAATAGCTGGTTCTTTGAATAGAATAGATAGTGA CACTACATATGATGCACTTATATACATTTGTTATCATCATCTTAATTTATTTTGCGGTGGAACTGACTAATTAAATTCTT CTTGGTTATAACCCAGACTGTTATTTTCCTGTACGTAACCTAGATGTCATTATCTTTTTGTTTACTGCACAATAAGGCTT GACTTTGTCCTCTTATACTACATCACAATTCTCAACCGAACTCTGAAGTTGACCAAATCCTTTAAAAAAATGCTGCTGCT AATTAATCGGTGCTCAGCAACCAACCCCAGAAACATTGTCAATTTTTTAAAACAATTAAGTAAAGAAAAATAGATTATTA GTACTAGTGATTAGTGAATTTATTTATGGATTTACTGCATGTTAATTTGCCAAGTTTTTCACTTTTGTAACTACTTTGTT TTTTTTTCTTTCTGAAAAGTCCTTTTAGAATAACTTTAGCTCTGCTTTTAAATCCCAAAAAGGGGGAGACATTCCTTTAA TCACATAAAAATATGTGCAATACTTTTATACTTATTGTTCTATATGGCCACGGTTATCTCAATCAGATTTCACTCAAGAT CATTGAAAATTTACTACTACTACTACTACTACCTAGTTAATACTATAATTTACTACATTATTCCTTAACAGTTAACACTG ATTCTCTATTACTCTGGACTTTTTAGGAACGTTTGACTTCACGGAGCACATATCTGAAACGGCAACTAACAGGAGTTTCC AACTTCACTCTCTCCCCACCGTTAAACATAACGGCTGAGACTTTCGCCACAGTTGCTGAATTCTGTTACAGCCGCAAAGT CCAGTTAACGCCGACAAACGTGGCTGCGGTGAGGATTGCGGCGGAGTTGCTAGGCATGACGGAGGGAGAAAATCTTTGCC ACGTGGCTGAATCATACTTTCAAACAATGGTTGAAATTGACGCATCCATGGTTCTGCGTTCGTGTCTGCCTCTGCTTCCC GAATCCGAAACGACGGCGTCGCTTGTGAGCAGATGTGTTGAAGCGTTGGTGTGGGAATACGGCGGCGATGTCACCCGTTT GGACGGCGTCGTGGGGTTGCAACCTCGCGATTTTCAAATGGTTGCTTACTCCCTGAACAAAAGGCTGCCCAATCACGACG TTCTGTACAACATGGTTGACCTTTATCTCAAGGTATGTACGCCACGTGTGACCTTACCTTTACATGTCTGCACTAATTCA TTAGGATAGCTTTGGTCATTACTATCTAATTTTATGATTTTGGTTCCTATTTTTAAATCTCTGTTTGTATCCTCCACATA TAATAAATACTTCAATGTTAATTGATGAGCTAGTATTAACATTTGTTCATAGAAATTTTTTAGGACTTATTTTGCTCTCA GATGAGATGTGATAGCTCACACTTTTAATATAAGATATTCTTAGAATGAAAAACAATAATTTTCAGCGTGAGTTTTTTTT TTTTTTACAAAAGGCATAGTAATTAGATTTGATAAGTAAAATATGTCACATAGATTATTTTAGACATGTGTGAATGATGA TGTGATCTTTTATTAGTCACATCACTAATTAATAAAAGAATATTATGAATTAGTTCGATTTTTTTTTTGAAATGTGAATT AGTTCGAATTGAAACCAAATTTATATGTAAATGTAGAGATCAAAATCATAAAACTTGGATAGTTGGACCAAAACAATGTA AGAGAGTAAAATGAAGAATTAATTAAGAACTTATCTTTTTAATCTAAAGCACATTTCTTAAGTTCTATTTGCATGAAATA TTCCCTCATCGAATTTTTTTTTTGCATGAAATATTGATTTTAATATATGATCTCAAAAATTAAGAATCATTTGTGAAGGA AAACAAGTACAGCAGCAAAGTAACAGAGGAGCAGAAAACTGAAATATGCAACTCCATAGACTGCACTAAACTCTCACCTG ATACCGTGGTGGATTGTGTTCAAAACCCAAGAATGCCGCTGAGATTCATAGTGCGAGCAATGCTGGTAGAGCATCTCCAC ACTCGCCGCTCCCTCATCGCGGCAGCCACCGGCGCCGCGCAGCCGCAAGTCCAACAATACCAAGAAGAAGAACAATCACG AACATCACTAGGGGAGTTTCTCCACCGTGACAGTGCTCGTCGCCAAACGGCACAGCTGAAGCAGGTTATGGATTCCACCT ACTCTCGCATTCAAAGCCTTGAAAAAGAGCTCAGGGGCATGAAGAAGATCCTTCTCGACCATCAACCTCAAGAGAAGGAG AAGATCAACGAGAATGCGTTTAACTCAGAGCGTCCAGCGAGTTTCCATTTTGTCCCAGCTGATCATAATGAGAATAGTAG TAAAATACAGAGAGGAGGAAGAGGCTCTGTTTCTTCCTCTGGCTTCCTGCTTCGTAACGTAATTACCAACAAAAATGAGA TGGAGGAGTATGATATTGGTAGTAATGGTGATGGCGGGAGCGGAACTCCTACGAGGACTAGAACATTGCGCCACAGGTTC ATTACTGGGCTAAAAAATGCATTTCGGATACAGAATTCTGCATCAAATGTGAAAGTAAGTTAGAAATGTGATTGATTCCA TCAGCTCAGAGAAAAATGGAGACATTGAAAGAGTACACATATGACATATGATCAAGGTGGAATGGTGGATTGTCTGCGAC TGTGACTGACTCAAGAGTAGTACTAATAAACGCAATTTTTTTATTACTTCTTATTGCTGTCAAATTCTTCTGTATTTTTC CCTAAGAGCAACTCCAACCCACAATTTCTTATCTGGTTTCTTAACACACTATTCAGCACTATTCCTGTGGGCCCGTATTG CCACATCAGACTTAAGAAACTCCTAAGAAACTGAACCAGATTTTGCTCCAACCCATGGTTTCTTAAATTACTATTT
CDS sequence (LotjaGi2g1v0409400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGGTTGGAACCAATTCCCGGCTATAGAGACCATCTATGAGGAAGAACATGAGTTCTCCTCCACCTCTTCTCCCTC TCTTTCACCATCATTTTCCTCTTCTCCTCCATCACTCCCCTCCTTAGTAAATGCTTGGTCTCTGGACTCTGGGTGTGAAA CGGACGTGTTGATAGGTGTTCATGGAACCTGTTTTCGGTTACACAAGGAACGTTTGACTTCACGGAGCACATATCTGAAA CGGCAACTAACAGGAGTTTCCAACTTCACTCTCTCCCCACCGTTAAACATAACGGCTGAGACTTTCGCCACAGTTGCTGA ATTCTGTTACAGCCGCAAAGTCCAGTTAACGCCGACAAACGTGGCTGCGGTGAGGATTGCGGCGGAGTTGCTAGGCATGA CGGAGGGAGAAAATCTTTGCCACGTGGCTGAATCATACTTTCAAACAATGGTTGAAATTGACGCATCCATGGTTCTGCGT TCGTGTCTGCCTCTGCTTCCCGAATCCGAAACGACGGCGTCGCTTGTGAGCAGATGTGTTGAAGCGTTGGTGTGGGAATA CGGCGGCGATGTCACCCGTTTGGACGGCGTCGTGGGGTTGCAACCTCGCGATTTTCAAATGGTTGCTTACTCCCTGAACA AAAGGCTGCCCAATCACGACGTTCTGTACAACATGGTTGACCTTTATCTCAAGGAAAACAAGTACAGCAGCAAAGTAACA GAGGAGCAGAAAACTGAAATATGCAACTCCATAGACTGCACTAAACTCTCACCTGATACCGTGGTGGATTGTGTTCAAAA CCCAAGAATGCCGCTGAGATTCATAGTGCGAGCAATGCTGGTAGAGCATCTCCACACTCGCCGCTCCCTCATCGCGGCAG CCACCGGCGCCGCGCAGCCGCAAGTCCAACAATACCAAGAAGAAGAACAATCACGAACATCACTAGGGGAGTTTCTCCAC CGTGACAGTGCTCGTCGCCAAACGGCACAGCTGAAGCAGGTTATGGATTCCACCTACTCTCGCATTCAAAGCCTTGAAAA AGAGCTCAGGGGCATGAAGAAGATCCTTCTCGACCATCAACCTCAAGAGAAGGAGAAGATCAACGAGAATGCGTTTAACT CAGAGCGTCCAGCGAGTTTCCATTTTGTCCCAGCTGATCATAATGAGAATAGTAGTAAAATACAGAGAGGAGGAAGAGGC TCTGTTTCTTCCTCTGGCTTCCTGCTTCGTAACGTAATTACCAACAAAAATGAGATGGAGGAGTATGATATTGGTAGTAA TGGTGATGGCGGGAGCGGAACTCCTACGAGGACTAGAACATTGCGCCACAGGTTCATTACTGGGCTAAAAAATGCATTTC GGATACAGAATTCTGCATCAAATGTGAAAGTAAGTTAG
Protein sequence (LotjaGi2g1v0409400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGWNQFPAIETIYEEEHEFSSTSSPSLSPSFSSSPPSLPSLVNAWSLDSGCETDVLIGVHGTCFRLHKERLTSRSTYLK RQLTGVSNFTLSPPLNITAETFATVAEFCYSRKVQLTPTNVAAVRIAAELLGMTEGENLCHVAESYFQTMVEIDASMVLR SCLPLLPESETTASLVSRCVEALVWEYGGDVTRLDGVVGLQPRDFQMVAYSLNKRLPNHDVLYNMVDLYLKENKYSSKVT EEQKTEICNSIDCTKLSPDTVVDCVQNPRMPLRFIVRAMLVEHLHTRRSLIAAATGAAQPQVQQYQEEEQSRTSLGEFLH RDSARRQTAQLKQVMDSTYSRIQSLEKELRGMKKILLDHQPQEKEKINENAFNSERPASFHFVPADHNENSSKIQRGGRG SVSSSGFLLRNVITNKNEMEEYDIGSNGDGGSGTPTRTRTLRHRFITGLKNAFRIQNSASNVKVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 34 | 456 | 423 | 2.6E-144 | ||
| PANTHER | 34 | 456 | 423 | 2.6E-144 | – | |
| Gene3D | 42 | 150 | 109 | 1.2E-12 | – | |
| CDD | 45 | 139 | 95 | 2.5831E-19 | – | |
| SUPERFAMILY | 45 | 140 | 96 | 1.62E-15 | ||
| Pfam | 49 | 142 | 94 | 2.2E-8 | ||
| ProSiteProfiles | 54 | 118 | 65 | 11.978 | ||
| SMART | 54 | 148 | 95 | 8.4E-5 | ||
| Pfam | 199 | 259 | 61 | 8.9E-9 | ||
| ProSiteProfiles | 215 | 285 | 71 | 14.742 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0409400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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