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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0413900 |
| Transcript ID | LotjaGi2g1v0413900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT2G22760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q1PF16|BH019_ARATH Transcription factor bHLH19; TrEMBL-Plants: tr|G7K131|G7K131_MEDTR Basic helix loop helix (BHLH) DNA-binding family protein; Found in the gene: LotjaGi2g1v0413900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91135157..91143548) extracted from Lotus japonicus Gifu genome v1.2.
GTAAAATGATTGAGCTCAAAAAGTTATGGTAAATTATTCAAACATTTTTGGTTAATTTAGAATTGACAGCCTAAACATTT TTGGTTAATTTAGAATTGACAGCCTAATCTGTCCACAATGCAACCGAGGTATCCAGTAGCTAGTGTTAATTTGTCGTAGA AAACAAGTACAAACAAACAAATTAGTCAATTAAGGACACTGCTAATTACAGTTTAGTACTCAGCTAGCTAAGATTAAGAA TATAATACAGATATACTGTAACCACGTGCTGTTTACTAATAATCTGCACGTACCTAACCTACCACTTTCTAAAAAGGATA TTTATATTTATATGGGGGGCCACTTAGACTATTCAGCAATCCCACTGTCGCTGTAAGAAGGTATTGTTTTCATTTCCAGT TTGGACTTTGGAGTATGCATGTGTTGCATTTGTGAAAATGTCTAAACCAAATGCCACAACTTTTTTCTTTTGTTTCAGGT TCATTGGTCCCTATTGCAGCTAGCAGAATGATGTCACCAGAGGAAGAATCATGGACTAGTTGGTTGTGTGACTTGGTAAG TTCAACATGATTCATTTTTATTTTCAACTGCATGCATTTTTTTGTGACCAAAACAAAACTAACTCAAGTAACTACTAACT AAGTACCCTTTTCCCTGTTTTCCCAGGAACTAGAGGATTGCGACTTCCTCAATGAACCTGACACAAACTGGTTAGATGAG AGTTTCCTGTCTGAAGACTCTGCTCCACAAGAGCTGAACTTGCAAACATCTTTCTCTAACGATAGCAACCACTCTTGCTC CACCATGAGCAACTCCTCCTCAGGGGATGATGATGATAACAGCTCTGAGAGGCCTTCCAAGACACTCAAGAATGATGCTT CTCCCTGCTACATTTTTTCATTTACCAATGAGAATCCAGCGCCAATATTAAACTTTGAATCAACTTTGAAGCCAAAAGAC AATGCTGTGAATGTTAATCATCATGAGAACAGGTCTAATTTGCCCTCAAAGAGGTCCTTGGAAAGTCAAAAGAAGGAACC AAAACGCAAAGTACAGGAGAGGGAGAGGGTCAGATCTCCTCACCAAGCTCACGATCACATTCTTGCTGAGAGAAAGAGGA GAGAAAATATTAGCCAGCAGTTTATAGCTCTTGCAGCTCTTATTCCAGGCCTCAAAAAGGTTCAAAATCTAAATTTCTTT CTCTTCTGAATGCTCATTACTTGAGTGGATGCATTTTCTCTATGTACTGATTATTGAAGGGTGTGTAATGCAGATTGATA AGGCCTCTGTGCTGGGGGACGCTATACAGCATGTGAAACAGCTCCAAGAGCAGGTGAAGCTACAGGAAGAGCAAACCAAC AGGAAAAGCACAGAGTCAGTGGTGTATTTTGAGAAATCTAAGTCCTCTGTGGACGAAGATGTCTCAGACACATCCTCAAA TTCAGGCAGAGAAAATAATGGTTCACTGCCTGAAATTGAGGCAAGGATGTCAGAGAACAAAGTGTTGATCCGAATCCACT GTGAGAAACAGGAGGGGGTGCTGATGAACATACTCAAAGAGATAGACAACCTTCATCTATCAGTGATCAATAGCAGTACC TTGCTTTTCGGGACCTCCAAATTGTACATAACCATCATAGCAGAGGTATACACTATTACTACTTTTGCTCAGAAGTACCA CATTAATTTGAGATATGACCAAATAAGTTTTTGTATAGGGTAATGCAATCCACACTCCTCAGCTATAGCTTTTTAATTAG ACTAGAGTAATGTATCCAGATTTCTTCTTCCATCATTTTCCTCCCAAAACAAACTGAGTGTTAGTCCCACATTGTTAATG GAGTTTTACATTAATTAAAAGTGAACTTGTTGAGAACAATATGTAAAATGAGACCTATGTAACTAGATTTACAGAGGATC GAGATGTGTTGTCAACTTGTCATGTTCTCTTGATGTCTTATTTTACTAGCCTATTGTCACTTGGTCTTGTCTCCCTAAAT TATAGTAAGGGTGGATGTGATTTGGAACTACATACAGATATAATTTTGTTAAAGCTGTTGCAAATGCAGATGGATGATGA GTTGAGGCTGAGCGTGAAGGAACTGGCAATAAAGCTTCGAGTGGGGCTCTTGCAATTCATGCAGTAGCATTCATTCAGTT AATCGTCTTGTCATTAGCCATCCCTCACTTTAAAGTTTAATGTATTATGGATTCAATAAATGTCCACTTTCTTAGTATCA ATAATAATAATTAGGTTCTCATTATCTTAATTATTCAGATTTTGTAAATCTGTTGTTGACCCATTCTTTAGTCAAAAGTC TATTGACTTATTCTTAGGCAAAAGATAAGCGCATGATTAGAGGAGAATCAATAGGAATTTGATAGCTTGATTCACTCCCA ATCTTGTCTGCTATCTTGTATATTTAAACTGACAGCAACAAATAACAATGATCAAGTTTTCCAATTACAGTTTATTTCTC TATATGGTATCAGTCAGAAACGATCCAGCCCCTTCTCTCTAATTCAGAACGCTGCTCCTCACCCTTGCCTCCAATGGCCA GTGACAGCACCTCCTTCATCTCCAACCCCTATGAGCCATCCAAACCCTTTGCTTGTATCACTCTTATCAGTGTCACCAAG CTTCTTCCCACCAATTATATTAATTGGAAACTCCAAGTTGAAGCTCTCCTTGATGGCTATGATCTTCTCCAATATCCAGA TGGATCCTTCTCCGCGCCGCCGGCATCGATCTCCACCACTGGAACACCTCCAGTGACAACCCCAAATCCTGCTTACCAGA CATGGCGTCGACAGGACCGCCTCATCTATGGCGCTCTCCTCACCACTCTCTCCAACGAAGTGGCCTCTCTGGTGTCTCAG ACAAAGACCTCTCATGATCTTTGGACCCTCCTCAAGAACACATATGCCAAAGCATCCCGCAACCATCTCAAGCAACTAAA AGAGCGTCTCCGTATGGCTTCCAAAGGTACCCAATCCATCACAACCTATATGCATTCTCTGAAGCAAACGGCAGATCTTC TTGCATCACTTGGATCTCCTGTCTCTGTTGAAGACATGATTGATCATGTCTTGCGCGGCCTCGACGACGGCTACAGAGCA GTCATTGATGGCGTGAATGCAAGGGATACCCCAATTACCTTTGATGACCTCCTCGAGAAGCTGCTCATCCAGGAACTCTC CATTGTTGCTGCTCAGAGACAAACTCCTGCTCCCCTTACTGCCTTGAATGCTCAGGCTCGACCCAACTCCAACAACCAGT ATCGATTTGGTCAATCCTCTGCCCAGTCCAATCAACGCACCAGCAACCGCAAACCGTTTTTAGGCCGCTGTCAATGGTGC AATGTCAAAGGCCATGTTCTGTCTCAGTGCCACATCTTCAAACAGCAACATCCCGGTGTCCCGCCGCCCCCTCGGAACTC TCCGACGTACCCTGGACAGGCTCAGGTCAATGTTGCAGCTGCTGGCCCACCTCAGACTGATTTTTTGGTTGACAGTGGAG CAACGCATCACGTAACCAATGACCTTGAAAATCTGGCACTCCATCATCCATACACCGGTCCTGACTCGCTGTTTATGGGT AACGGTTCAGGTTTAAACATCTCTCATTCTGGAACACTTTTACTTAATGATTTATCCCTGTCTAATGTTTTGTGTGTTCC TTCCATGAAACAAAAAATCATCTCTATCTCTAAACTTACCAAACAAACTAACTCTGCTGTTGTTTTCCTTCCAAACTCTT TTCATGTGACGAATCTGCAGACGGGCCACACAACCCATAAAGGATCATGTGTCGATGGACTTTATCTCTGGCCCTCCGCC TCACCATCCGTCCACACCGTCCGCACGGAATCCTCTGCGTCATGGCACCATAAGCTTGGCCACCCTTCATCTTCCATTTT CAAATTTCTTCAACAACATTTTTCTTTGGGTTCAAATAAATTCCAGTAATCAAATTGCAACTCCTGCCAGATTAGCAAAA GTCACAAGCTTCCTTTTCATGAGTCCACTCTTACATCTTCTTATCCATTGGAAATAATTTTTTCAGATGTATGGACTTCT CCTATTTTATCAATTGATGGTCTTCGTTACTATTGCATGTTTGTTGATCATTTTACTCGCTATATCTGGCTTTATCCAAT AAAACGCAAATCTGATGTGCAAACTATATTTCCTAAATTTAAATCGCTCATTGAAAACTTTTACCACCACAAAATAAAAA TCTTATACACAGATAATGGTGGCGAATATATTGGCCTTCGTCCTTTTTTAACCACTCATGGTATAAGTCATCACACCACC CCACCTCATACACCTGAACACAATGGAATCTCAGAACGCCAGAATCGCCACATAGCTGAAACCGGTCTCTCTCTTCTCCA CCACTCGGGCTTGCCCCTAACCTATTGGCCTCACGCCATGACCACTGCAGCCTACCTCATAAATCGTCTCCCAACTCCTA TTCTTGAGTACAAATCACCTTATTCCAAGTTGCTCAACATTAGCCCGGATTATCATAAGTTAAAATGTTTTGGATGTTTA TGTTTTCCCTGGATTAAACCATATACTAACCATAAACTTGCGCCAAAGTCTGCTATGTGTGTTTTTGTAGGTTACTCGGC TGATCAACATGCGTATTTGTGTCTTGATCCCACAACAGGAAAGATTTACACCTCTCGCCATGTGAAGTTCGTCGAATCTG AATTTCCATTCAGCTCCCTAGTTGCTAAATCATGTCCGGGTGCAGAGCAACAAACAGGCCCACTCCAACTCTCCATTTTA CAGCCTATAACCCAACCCACTGTGAGTACCACTCTAAACCCACTGGAAGATTTCTCCGCTGCCTCTTCCTCTCCATCTAC CAACACCACTCAATCTCCCCCTCCAACCTCACAACCGTCACCACAACTTCCTGCCCCACCATCACCACCCGCTATCAACC CCAACGGCGGTGGGATCATCACCCGGTCTAAAAACAACATCGTCAAACCCCTCAAAAAGCTCAACCTTCATGTCCAATCC TCCTCTCCCATCGAACCCAGCACCATCACCCAGGCTCTTCGTGACCCTGATTGGCGCTCCGCCATGCAAGCCGAATTTGA TGCCTTAGACCGCAACAACACTTGGGATCTTGTTAGTCGGACCTCTACTCAAAATTTGGTTGGCTGTAAATGGGTTTTCC GAATCAAACGGAATCCGGATGGATCGATTGATCGTTACAAGGCTCGGTTAGTCGCCAAAGGTTTTCACCAGCGCCCTGGT TGGGACTATACGGAAACATTCAGCCCAGTTGTTAAACCGGTGACCATTCGTATTGTACTAACACTTGCAGTACGCCAAGG ATGGTCCATACGTCAGCTTGATGTCAACAATGCGTTCCTTCAAGGGACACTCAAGGAAGAAGTCTTCATGCTACAGCCAC CTGGTTTTGTCAACAAAACCTTTCCTGATCATGTCTGTCGCCTCACAAAGGCACTCTATGGACTAAAACAGGCACCTCGT GCTTGGTATACGGAGCTTCGAGTATTCTTGCTCTCCCTTGGCTTTGTCAATTCCACTGCAGATTCATCTCTATTCATATA CCAAAAACCGGGCGTTACACTGTACTTATTAGTATATGTTGATGATATAATTGTCACTGGGAGTTCCTCTGCAGAGTTGT CCAAAATCATTGCCACACTTGCTGCTCGTTTTTCATTGAAAGACCTTGGATGTCTCAGCTATTTCTTAGGTGTCGAAGTC ATTCCTTCCGCTACAGGTATGTTTCTTTCACAAAGGAAATATATCACTGATCTGCTCCATAAATCAGGCATGGCAGATAC GAAACCAGCATCCACTCCCTTGTCTGCGAGTGTTCCATTACTCAAGGATTCAGGTGATCTCCTGCCTTCCCCAACTGAGT ACCGAGCACTGGTTGGAAGTCTTCAATACTTGAGCCTTACACGCCCAGACATCGCCTTCAGCACCAACAAACTTGCACAA TTCATGCAGAACCCAAGAACGGCGCATTGGTCTGCCCTCAAAAGAGTGCTCAGATATTTGGCGGGCTCTTGTGACAAAGG AGTCTTCATCTCAGCGACTGCCCCGCTGACCTTTCATGCCTACTCGGATGCGGATTGGGCGGGTGACAAGGATGATTATG TTTCAACCACTGGTTACTTGTTGTACCTCGGCAGCACTCCCATCTCTTGGAGCTCTCGAAAGCAACGTTCAGTTGCTCGA TCATCAACAGAGGCAGGATATAAAGCCTTGGCTGACACCGCTAGTGAGCTCCTATGGGTCCTTTCCTTGGTCACACACCA ACCGCCAATCCGGTGATATATTGTGACAATCTCGGTGCCACAAATCTAAGTGCTAATCCTGTCTTCCATTCTCGGATGAA ACATATAGCCTTAGCATATCACTTTGTCCGAGAAAATGTTCAACATGGCAAGTTTCGAGTGTCCTTTGTGTCTACTGATG ATCAGCTTGCTGATGTTCTAACCAAGCCTCTACTTCGCCCTCGGTTCGAGTCCTTACTGTCCAAGTTGCATCTCTCTTCC AGATTATACAACTTGCGGGAGGATATCAATAATAATAATTAGGTTCTCATTATCTTAATTATTCAGATTTTGTAAATCTG TTGTTGACCCATTCTTTAGTCAAAAGTCTATTGACTTATTCTTAGGCAAAAGATAAGCGCATGATTAGAGGAGAATCAAT AGGAATTTGATAGCTTGATTCACTCCCAATCTTGTCTGCTATCTTGTATATTTAAACTGACAGCAACAAATAACAATGAT CAAGTTTTCCAATTACAGTTTATTTCTCTATACTTAGCAGTTGCCACGTGAGTAATAAAAGTTAGGCAAACTTAAAAATG CTGTTTGTGTTTTAAACATCAGCCATGCCCCCCACTTATAGACCAATAGCAAGATGCCTAGTGTAATAAATTGCCATGTC ATCCGTTTGACCAGTAAGTTTTATTTTCTAAATTTGGGTCCCTAATATTTTTAAGTTTTGCATTATATCCCCCAACTAAT TACACTTTTTAATTATTTTTGAAATTAAAAATAGAATTCATTAACCTAAAACCTTTCTTGCCCCTGCTACATCGTGTTGC TCTCTTCAGCCACAGCCTCCTCGACGGTGGTGGTTTCAGCCGCAGCGGTTCACCTCCTCGTCACACGGGTGGTGGCTTCA CCACCGTGTTCCAGCTTCTGGGTCTCAACCGAAGTATTCCTCTGCCTGCAAGTCCTCCTCCCCCTAAGCGAATCATCTGC TGCAAGGCACCCTTCGTAGCCGCCGCAAGCCCTGTTTATTCCGACCAGAAGCACCTTCGCCGCAAGCTACTTTTCATCCA TCGCAAGCACGCCTCAGGCACAAACTGGCGAGCCTATGGACGCTCCTATCACATAGGATTGATACTTGATAGATATTTGT ACTACGTAATCAATACTTAAACTTGCTCCAGTACTTGATATTTGCGTCCATTTCATGTAGGAGGGACCTTGCTTACAGAA AATCCGATCAAAGAGATTGAGGAGTTTGTGCTTCGGACAGGAAGTCTACACCCACTGAGGTTCATCTGATCCGGACAATT ATTTTGCTTATGTGTGTATTCTGAGTACATATCAATTGTCTGTTTTTTTTTTATCTCAAACGAAAAGATTTTTGAACTTT TAATTAAATTATCTGGGTTAAGTTGCTTCCGAGGCTCTGCTTGATATATTCATTCATGTAGGTTCTTGTAATTTAATGGA ATTTACATAGTATTGTAACAATTTAAATTCAATTAGTTTTTTAAATTTTTCTTCTATGTTTCAGATGTGCAAATTATGGG AGGTTTAGCATGGAATCTGGTTCATCCAATTTGACAGAACACAATTTCAAAGTGATAAAGCTAAAGCAGTGCATATGCAA TTTCAAAGTTCTAGGAAGTCCCAAGTTGACGGACTTGAAGTACTGCAGGGGCAGCAAAGAATGGTTAAAGTGGAACAAGA CAAACTTGCCGTACCAACCTTCTTTTGAAGTGTTTTATTGATCATTGGAAGTCAGAGCTGTTTAATCTCCTGCATTTTGC TTCTGAAACAGTGGAAAATTCAGAAAAACTTGTAGAATACAGAATGCTTTGAAGAGTGGTAGAAGATATTGCTCCCCTTC TTTATGGACTTGTTGATATAGCATGACTGCAAAGCAATTGCATGCCATTTTCCATACAAAATTGTAAATTGATCTCATTA ACTGTCATATTGTATGTTTCAACCAATACAATTATGTCATGTTAACTAAAAATGCATGGATATGACATTTTTATAACCTT ACATGGTGGTTTTTAATTGCCATGAGACAATTTCATTGGTGAAAGAGGATATGAGATATCATTTAGGGATTG
CDS sequence (LotjaGi2g1v0413900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCACAACTTTTTTCTTTTGTTTCAGGTTCATTGGTCCCTATTGCAGCTAGCAGAATGATGTCACCAGAGGAAGAATC ATGGACTAGTTGGTTGTGTGACTTGGAACTAGAGGATTGCGACTTCCTCAATGAACCTGACACAAACTGGTTAGATGAGA GTTTCCTGTCTGAAGACTCTGCTCCACAAGAGCTGAACTTGCAAACATCTTTCTCTAACGATAGCAACCACTCTTGCTCC ACCATGAGCAACTCCTCCTCAGGGGATGATGATGATAACAGCTCTGAGAGGCCTTCCAAGACACTCAAGAATGATGCTTC TCCCTGCTACATTTTTTCATTTACCAATGAGAATCCAGCGCCAATATTAAACTTTGAATCAACTTTGAAGCCAAAAGACA ATGCTGTGAATGTTAATCATCATGAGAACAGGTCTAATTTGCCCTCAAAGAGGTCCTTGGAAAGTCAAAAGAAGGAACCA AAACGCAAAGTACAGGAGAGGGAGAGGGTCAGATCTCCTCACCAAGCTCACGATCACATTCTTGCTGAGAGAAAGAGGAG AGAAAATATTAGCCAGCAGTTTATAGCTCTTGCAGCTCTTATTCCAGGCCTCAAAAAGATTGATAAGGCCTCTGTGCTGG GGGACGCTATACAGCATGTGAAACAGCTCCAAGAGCAGGTGAAGCTACAGGAAGAGCAAACCAACAGGAAAAGCACAGAG TCAGTGGTGTATTTTGAGAAATCTAAGTCCTCTGTGGACGAAGATGTCTCAGACACATCCTCAAATTCAGGCAGAGAAAA TAATGGTTCACTGCCTGAAATTGAGGCAAGGATGTCAGAGAACAAAGTGTTGATCCGAATCCACTGTGAGAAACAGGAGG GGGTGCTGATGAACATACTCAAAGAGATAGACAACCTTCATCTATCAGTGATCAATAGCAGTACCTTGCTTTTCGGGACC TCCAAATTGTACATAACCATCATAGCAGAGATGGATGATGAGTTGAGGCTGAGCGTGAAGGAACTGGCAATAAAGCTTCG AGTGGGGCTCTTGCAATTCATGCAGTAG
Protein sequence (LotjaGi2g1v0413900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPQLFSFVSGSLVPIAASRMMSPEEESWTSWLCDLELEDCDFLNEPDTNWLDESFLSEDSAPQELNLQTSFSNDSNHSCS TMSNSSSGDDDDNSSERPSKTLKNDASPCYIFSFTNENPAPILNFESTLKPKDNAVNVNHHENRSNLPSKRSLESQKKEP KRKVQERERVRSPHQAHDHILAERKRRENISQQFIALAALIPGLKKIDKASVLGDAIQHVKQLQEQVKLQEEQTNRKSTE SVVYFEKSKSSVDEDVSDTSSNSGRENNGSLPEIEARMSENKVLIRIHCEKQEGVLMNILKEIDNLHLSVINSSTLLFGT SKLYITIIAEMDDELRLSVKELAIKLRVGLLQFMQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 4 | 12 | 9 | - | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| Phobius | 18 | 355 | 338 | - | – | |
| PANTHER | 21 | 350 | 330 | 3.2E-114 | – | |
| PANTHER | 21 | 350 | 330 | 3.2E-114 | – | |
| MobiDBLite | 68 | 102 | 35 | - | – | |
| MobiDBLite | 68 | 89 | 22 | - | – | |
| MobiDBLite | 139 | 185 | 47 | - | – | |
| Gene3D | 154 | 239 | 86 | 4.1E-14 | ||
| ProSiteProfiles | 174 | 223 | 50 | 14.519 | ||
| SUPERFAMILY | 178 | 240 | 63 | 4.97E-16 | ||
| CDD | 179 | 228 | 50 | 1.01131E-10 | ||
| Pfam | 179 | 224 | 46 | 3.8E-9 | ||
| SMART | 180 | 229 | 50 | 2.8E-13 | ||
| Coils | 213 | 240 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0413900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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