Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0414300 |
| Transcript ID | LotjaGi2g1v0414300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CAAX protease self-immunity protein; TAIR: AT4G17840.1 CAAX protease self-immunity protein; Swiss-Prot: sp|Q30R95|DDL_SULDN D-alanine--D-alanine ligase; TrEMBL-Plants: tr|I3T6T9|I3T6T9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0414300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91216989..91224342) extracted from Lotus japonicus Gifu genome v1.2.
TGGAAAACGTTATCTCCACGTGTCATCCTATGAATGGTCGTGCGGATATTCTCGTAAAAGATCAATGTCTTGTTCTAGCA AAGTTGACTATTCTTGTTCGAAATTCTTTGAACCTGAACCTCTTGTTCTTGTTCTCTTACGACGTTGCTTCATTCAGACC AATGAAGAGTTCTCAATCTTCTTCTTCTTCTCTTCACTCCTTCTGAATGGAGCTATCTCTTGCACTCACCACCACCAAGC CTTCTTCAACTTCATCGCTTCCACTTTCCCACAAGCTATGTGAGTTTCACCTCAGGAAGAAGCAGAGAGTGGTTCCCTTC TTCGATGGAGCTAGGATTCCGCTGCGTAGTGTCAGGGCTTCGGCTGAGCGAACCGGGGAGACCATCACCGATAGGGATGC AAGAACCGCCGGGTTCACCTCCCCGGCGGCTATGGAGGTCACCACCACCGCATTCAACGATGCTGATTTCCCTGTTTGGG AGAAGATTGGTGCTATTGTCAGACTCAGCTATGGCGTCGGTGAGATAAGATTACAAGCTTTTTAGAGTGTTGAACTTAGA TTTGCTTTGTTCATTCATTCAATAAAGGAAGGAAAAGTGTCTTTTTGCTGTATATTCAGTTAAATTGAAAAGGAAAACAA TCAATCTCTTTTTGAATCAATTCAATTTTATTTCCCAATTAGGAAATTTTAGATTTGTATTCATTGTAGCTCAATTTGAA GTTGGGGTTTGATTTTCCTTGCTCAATTTGAATGAATAGATTTTTTTTTTTCACTTAAATTGAAGTTGGGGTTTGCTTTT CCTAGCTCAATTTTTAATTTTTAATTTATTTATGAATTGGCTGTTTCAGGGATTTATGGTGCCATGGCTGTTGCGGGGAG TTTTATATGCTCCATCACTGGAATTGACTCTCTAGGGGGTTTCCATCTATCATTAGATGCCATTCTGGATGGGCTTGGAT ATGCAGCTCCTCCAATCATGGCTCTTCTCTTTATACTTGATGTAAGTTACTTCATTTATACTTGTGAGTTTCTAATGTTA ATGGGTTTCCTTTGTTCGGCCTTCATCGATATTAATATGCCTCTTTTATGGAACTTTATATTAATTAATTGACATGGTTG TTGTTAATAGGATGAAGTTGTGAAGCTATCACCCCATGCTCGTGCCATCAGAGATGTGGAGGATGAAGAACTCTGGAGTT TTTTCTATGGGATGTCCGCTTGGCAGGTAACTTGACAAAACGATTTGCTTGTTTTGGCAACCTGGATTGACAAAACAACC ATGAAGAATAATTTCATTGAATTTACTCTGCAGTTTGTACTGATGGTTGCTGCAAGTTCAGTGGGAGAGGAGCTCTTCTA CAGGGCTGCGGTTCAGGTTTGTTTACGAGCTTCTGTTCTGTGCCTGTTTTGGGTTGTATCTTCCTAGAAATGTTGAAGCA ATAGTTTATGGATAAGCTTGAAATCGGGAACAATGAAACTTATATGTTAGGTTGAGCCATATAATGAATAATCTTCAAAT AATGTTGGTTGATTTCAGATGAGTTGGTCTTATTGTCTGACATGAAAGACCACCATAGTTGTGCAACATATGCTGCATAA TACCATGGGAATGGAAGTTCTATAAAATCTTCTAGCACTAAATTCATCCTATAGTTCAGAGTTTTAATCTAATATTGGAA GTCATCGCTTGTACTGTTTTGGTTTTCTTCTTAATGATTATACAGAAGGGAATAAAAGCCTTGCTTTTTGTTTTTTCCCC TCCTGATATCTGTCTCTCAAGATTGCTGAAAAAACTACAATTCTGGTGGTCCGTATAAACTTGCTAAGAAGATGAATAAC ATGAGTTTCATGATGAAAATGATTTCATTATGTAAATAGAAGAAGAAACTTGCAGGCTGAATGATCTTGAGGAATTCTAT ATCTGATCTTAGTAACTTACGTTCACAATTCTAATTTCTACAGGGTGCGTTGGCTGATATATTTTTACGAGGCAGTAATC TTATACCAGAAGCTCAAGGAATGGCATCTTTGGTATGTGTACTCTTTACTTAGTTGTTCCTTTTTGTCACAAATATTCAA AGCTAAAATTTTCATCCCTGTGACTAGCTTACAATTTATATGATAAAATGTAGACAGGGGTACTGCCTCCATTTGTTCCA TTTGCTCAGGCATTTGCAGCTGTACTTACAGCTGTCCTTACTGGTTCTCTCTATTATGTGGCTGCCTCTCCTAAAGGTTA CTTTTGTTATTTCCCTTTACACATTTTCCCTCTTCTGTGACTTAAAAGTTTTCCTACATTGTTCTCAGCCTAATGAATGA TTGCCTCCCTTACCAATTCTCTCTTTTTCTCTCTCTTTCAGATCCTACTTATATTGTGGCACCTGTTTTACAGTCTCGCT CTGGTCGTCAAGATTTGAAAAAGCTATTTGAAGGTTCAATTTTTTTTCCTATAGTTGTATTATAATCTATTTGTGTGTTT CTTATTTGCCGACTAGGAGTTTGTTATGATTCTTAATCAACAGAATTATATTATTCATACAATAAAAGTTGCTAATGCTT ACATTTATGGTTTTCATTCTTGTTTTCTTGATCACATTCTTTTATCTATTCTCTGGGATTGTAATCATCTGTTCCTTTTT CCTGTTCCCCTTGTAGAAATATAACACTTGAGCGAAAATTTCAAAAGCTAAGTTAGAGAATGTTAGTTATTGAAGGAGAC AGACAGAGAGAGAGAGTTTTTTTGGCAGAGATGTTATGCTTTCATTGGAGGGACATGGAAGAGGATAGGAAAAGTTGTCA TATGATATGACCTCAGCCCCTTTTTCTGAATAGAAGATTTGGGGCTAATTTTAAGTTACCAATACTACTGATGGTGGATT TGATTTGATCATGTGAATATCTTTGAAGAACATTCATTGTCATTTGGTTCAGAAAATGATGGAACAAACCAATAAAATTT CACTCCAATGTTCATCTTTGATCTTTCCCATTGATTAGTAGTTTGTGAAGGTGGTTAAAAATGGTTCAGAAATGAAAATA TTTTGTCTCAATCCATAGAGAGAGAGAGAGAGAGAGAACTCCTTTTACTTTTGTGCATTAAAGAGTAAAATGTGCTTTTT GAGCTCGACAACTGCTATCCAAGCATGCTATTACTCTCCTGTCTGAGAAGTATGATATATTTATCTAATCCACTCTCTAT TTCCGGTTTGCAGCCTGGTATGAGAAACGGCAAATGAAAAAAATATATTCACCACTTCTGGAAGGACTACTAGCTCTCTA CCTAGGATTTGAGTGGATCCAAGTAATTCTATTTAACTTCACATCTTTCTTAAATGTAGTTTATCTAAGATTACAAATGA TGAAACTAATTTCTGTTTTGTTTGGGATGCTTGTGTGGCAGACGAATAACATTCTTGCTCCCATTATCACACATGGCATA TACTCCACAGTTATATTGGGACATGGCCTTTGGAAGATAAACGACCACCGGCGAAGACTACGTCAAAGAATCCAACAGCT CAAATCTGAAGAACAAAATTCCAAGTAGACTTTGAAATACCTTCCATGTCTGGCTGTGATACAAAAAATGTATATGTATG TATTAGAGCTGCTAATTATGTAAAGAGAAAAGATGTATATACTTGTGTTAGCTGAGGTCTCGTACACACTGAATATTCAG GTTTTGTTCACAATTTTCTAATTTCGAGTTACTATATGTAGTGTTTTCTAATAAAATGAAATAAAATCCCAAAGTTGGGT TGATTTAAATTAATGTATGTATGCATTTCCATTTACAATATTGGCCAATTTGACGTATGGTTTAAATATTTAACTGGACT TGGACTACAGTAAGTCAGTCAAGATAAAGAAAGTGATGGGGTTTCTCTGCTGTTTCATACCTGATAATTTCTGTGCCTTT TTGTTAGGTTTACTGCCATGTTATGTTGATGGCTATCTAGTTTGGGTTGTATTGTGTATCTTTGTGCTATTAACTTTGGT CTTAATCCAAGCACGATTGATAAAAAAAGAAAGTGATGAGGAACAATGAAAGGAAAATAAAGAAGGGACATTAACTTTGA TTGAATAAAATAATGGTACTGTTTAAAAGAGAAACTCATGGCTAACAGTAAACTATAGTTCGTCCATCATGTTGAGGGAA AACCTAACACCAAGCTGATCCTTTACACAATTTAGCAGTTAATTAAATTGAACTCAACAATCGTTTCAGCTTGCAGAGCG CCAGTATTTGGATATTAGGGGTATCAGTACAAACGGGCATAGTATGTGCTTCCAAACGAAAAGTAAATGGAACTCTTCTT TTGAAAGTTCATTCACGTTGCATTTGACTGATGTCCAAATACAAACTTAGTCCTTCCTAGTCTTCCAATTGAGAGATGAC ACTCGTGAACACCCGATATCCTTGGGACATGTCGTTAAAAAGACAGTACTCATTCTGGGCATGGTAAGTTGCCATTAGAC CTGGAAATAGCGTGGAATGCAATGAGTAAGTACTTAACTACTTCCAAAATCAATACAATGCATAATTTGTTCTAAGTCAT ATCATACCGTAGCCAGAAGTTTGAACATCAAATCCTTCATCCTATGAAAAGAGAAAGAGGGGTTAAGTAAGAAATGTGAA TTGCACAAAAGCTTTTGATGGATCAATGAGCATATATTTTCACCTGAAGTTCTCGAATGAGAGGTAAACTACCAGTCATT GAGTAAGGCTTTACATGCCCAACTACTTCCTCAGTTGCTTTGCATAAAACATGGAAACCTCTAGAGTTAAGATCACAAGC AACTCCAGACATTGCCTCGTCGAAAGTTATAGTAAGGCTGTAAAAAGAGCAAGAGAACCGGAACTAGTTAGAGAGAATCT ATGATGAAAAAAAAGGCCTAATCAAGAGATCAAAAGAAAATATGAAGTGGTTAAATTTTGAAGGAGAGATAGACAAGTCC CACCTTCCCCTTAAGTTTTCATCAGATAGGACATATTTTGAAACTGGACCTCGTGCTTCTAGCTTACTTATATTTTCATT AATATCACCCACATACTCTTGCAACTTCTTCATAACATCCTTGACACTGAACAAGGTATTAGAGCACTAGATATGAAAAT TCATAGGATAATTGAAATCTCTCACTCTCACATGTTTGCTTCTCTCTGTACCATTCGCAATTGCAACAAGCTATTAAAAT AAAGAGTAAAAATTTGGCATAGCTTACTTGTAGAATGGAGTCAACCTGCAACAAACAAACAAGAGAAAAAATATCTTTAA TGCCCACTCACATCATTCCTAACAAATTGCCTCGAGTAAATTCTAAGGACAAGGGAGGAGAATAAACCTGACATCTCCTG AAATAGTGCATTCCCCTGGAATTTGGTTGATTCCACCTCCAGGATCTGTAGTTGAGATTATAATTACAATAATTGAAATT TTTTTCTCTCACTAAAAGAAAGTATGAAAATTGTTACTTGGGCCCCAAAACTTACAACTCCATTGGGTTGGTTTCATGGT TGAAGGGGTTGCAAACCCATAAACCTGTTCCTGAGGATGAGGTGGGAAGTCTCTATAAAATCGCAACTGGATTTCCTTCA TAGCATCCATGGCTAGTTCCAGTGGATTTATAGCCTACAAGTAACCAAATATGAAATAAGCTTACAGCTACAATACTTGC ATCAAATATGTCCTGACTGCATCTTGGATGTCACAGATTCATAATCGACTCTATAAACTCACGGGTACAGTAACATTATT ATCTTTTTGTATACTTGATCAAGTTCTCAAGCAGCAGGGGTATGTCCAAAGAATAAATAAAAAATTGAGAATCTCCAGTA ATCAATGTCTTCTTCAATATCTATAGAATGAAGTACAAGGTGCAGCCTAAGCTATTTCTCCCCCCTAATTTATCCTCAAG GGTATGCTTGGTGTACAGTCAGGAGTGAACATCGAGTGCAATAGAAATATATTAACTTTGACTCACTGATGCTAGGTAGA GTAGAAAAATGGTAGAATATCATTTGTACCTACCAAATATAGTAGGGTGGAGTGAAATAGAGTTGCAATCCATTACAATG GTGCCACAATTTTGTTATAACATGCAAAAATTATTATGCCAAAAAATTTTCCCCTCTCAAATTGCCCTCCAATTGCCAAA CTTAGCTCAATTGCATACCCTAAACTCCAGCAAATAAAAGCAACTTCTAGGCTTCATGAATACCTTGTTAATCCCCAACT TTTACTTTAAATCCAAACCAATCTTAAACTAACCTGGACACTCTGATAAAAAATCAACAACAAACCCCCAGGATACAGCT CATAAGCCTACACAAGCTGCACATCTTAAACTAGCCCGGATTCCTTTCTATGACATTTGAATCCATGAAAGTTATTCCAT AGCATTCCCGGTATTCTAAATTGTGTAATCTGTTAACTGATAACTAACTTAAATATGTGCTTAACTCAATAGAGGGCTAG AGCCATATTATGGCTCTAGTGTACCATAATTGGACATGATGAAATAGAATAAATTATTATTTATTAATTCCTTTTCCATC GTAGCAATGATTAGATTCCTCTATTCTATAAAAGAACTGATGCTGGTTTGGCCTTTTCTTGGTCAGATGACCCAATATTA AAATAGCCAAACCATGTCCTAATTCACACAACGCATTAGTATGCTGTAATTAACTACCATAACTACCAGCTTCCGTGGGA CAGGTAATATACAGATCCTTCAATCAAATTAATCAAGTGAAAATTATCAGTAAGCACATATGTCAAGCTTAAACTACGTT GAGGGCTATCAATCTCCTATAATTTTACTAGCTTCAGGTTTACAATGGGTATTCAACATCTTACTTTCCTCTACAGTGGG CAATACTTATTATACTTCATATTTGCTTGCCTTCTTAACAATAGCACCGCATACTTCACCCAGATTCCGATGTTGCATAT AGCAATGCAACTTCCCTTAAATGGCTATTGGCATTGCATATTTTTAACATTAGAAAAGGAATATTTTTATTTTTTTTAAC ATGAGAATCAGGAGTAAGAACTTCTTAACTATTACAATATTGACATAACATCATAATGTTAGTTCATACTATGCTATAGG CTCGTGAAGAATCAGGACTGAGAACTTTTTAACTATTACATGATAGGGAAAACATCAGAATATGAATTCAAGAGAATAGT GCTAGAGCAAACCTTATGAGCTAATCCACTGTGAAAGAGCTTCCCCGTGACATGAAGTTTCCAAGGTATCATACCACCAG TGCCTACACAAGGTTGTTTATCTGCCGTGTCGATCCAAAACCTGAGCAAAACCACACAAATTTAAACCTTGCAA
CDS sequence (LotjaGi2g1v0414300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCTATCTCTTGCACTCACCACCACCAAGCCTTCTTCAACTTCATCGCTTCCACTTTCCCACAAGCTATGTGAGTT TCACCTCAGGAAGAAGCAGAGAGTGGTTCCCTTCTTCGATGGAGCTAGGATTCCGCTGCGTAGTGTCAGGGCTTCGGCTG AGCGAACCGGGGAGACCATCACCGATAGGGATGCAAGAACCGCCGGGTTCACCTCCCCGGCGGCTATGGAGGTCACCACC ACCGCATTCAACGATGCTGATTTCCCTGTTTGGGAGAAGATTGGTGCTATTGTCAGACTCAGCTATGGCGTCGGGATTTA TGGTGCCATGGCTGTTGCGGGGAGTTTTATATGCTCCATCACTGGAATTGACTCTCTAGGGGGTTTCCATCTATCATTAG ATGCCATTCTGGATGGGCTTGGATATGCAGCTCCTCCAATCATGGCTCTTCTCTTTATACTTGATGATGAAGTTGTGAAG CTATCACCCCATGCTCGTGCCATCAGAGATGTGGAGGATGAAGAACTCTGGAGTTTTTTCTATGGGATGTCCGCTTGGCA GTTTGTACTGATGGTTGCTGCAAGTTCAGTGGGAGAGGAGCTCTTCTACAGGGCTGCGGTTCAGGGTGCGTTGGCTGATA TATTTTTACGAGGCAGTAATCTTATACCAGAAGCTCAAGGAATGGCATCTTTGACAGGGGTACTGCCTCCATTTGTTCCA TTTGCTCAGGCATTTGCAGCTGTACTTACAGCTGTCCTTACTGGTTCTCTCTATTATGTGGCTGCCTCTCCTAAAGATCC TACTTATATTGTGGCACCTGTTTTACAGTCTCGCTCTGGTCGTCAAGATTTGAAAAAGCTATTTGAAGCCTGGTATGAGA AACGGCAAATGAAAAAAATATATTCACCACTTCTGGAAGGACTACTAGCTCTCTACCTAGGATTTGAGTGGATCCAAACG AATAACATTCTTGCTCCCATTATCACACATGGCATATACTCCACAGTTATATTGGGACATGGCCTTTGGAAGATAAACGA CCACCGGCGAAGACTACGTCAAAGAATCCAACAGCTCAAATCTGAAGAACAAAATTCCAAGTAG
Protein sequence (LotjaGi2g1v0414300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELSLALTTTKPSSTSSLPLSHKLCEFHLRKKQRVVPFFDGARIPLRSVRASAERTGETITDRDARTAGFTSPAAMEVTT TAFNDADFPVWEKIGAIVRLSYGVGIYGAMAVAGSFICSITGIDSLGGFHLSLDAILDGLGYAAPPIMALLFILDDEVVK LSPHARAIRDVEDEELWSFFYGMSAWQFVLMVAASSVGEELFYRAAVQGALADIFLRGSNLIPEAQGMASLTGVLPPFVP FAQAFAAVLTAVLTGSLYYVAASPKDPTYIVAPVLQSRSGRQDLKKLFEAWYEKRQMKKIYSPLLEGLLALYLGFEWIQT NNILAPIITHGIYSTVILGHGLWKINDHRRRLRQRIQQLKSEEQNSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 99 | 99 | - | – | |
| PANTHER | 1 | 366 | 366 | 1.2E-193 | – | |
| PANTHER | 1 | 366 | 366 | 1.2E-193 | – | |
| Phobius | 100 | 123 | 24 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 124 | 134 | 11 | - | – | |
| TMHMM | 133 | 155 | 23 | - | – | |
| Phobius | 135 | 154 | 20 | - | – | |
| Phobius | 155 | 174 | 20 | - | – | |
| Phobius | 175 | 194 | 20 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Pfam | 184 | 335 | 152 | 1.0E-8 | ||
| Phobius | 195 | 237 | 43 | - | – | |
| TMHMM | 238 | 260 | 23 | - | – | |
| Phobius | 238 | 260 | 23 | - | – | |
| Phobius | 261 | 299 | 39 | - | – | |
| TMHMM | 300 | 319 | 20 | - | – | |
| Phobius | 300 | 318 | 19 | - | – | |
| Phobius | 319 | 323 | 5 | - | – | |
| TMHMM | 323 | 345 | 23 | - | – | |
| Phobius | 324 | 343 | 20 | - | – | |
| Coils | 342 | 367 | 26 | - | – | |
| Phobius | 344 | 367 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cysteine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | CAAX-box protein processing | The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis. |
Expression pattern of LotjaGi2g1v0414300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…