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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0415800 |
| Transcript ID | LotjaGi2g1v0415800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein NRT1/ PTR FAMILY 5.1; TAIR: AT1G32450.1 nitrate transporter 1.5; Swiss-Prot: sp|Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3; TrEMBL-Plants: tr|G7JZV7|G7JZV7_MEDTR Peptide transporter; Found in the gene: LotjaGi2g1v0415800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91361352..91366684) extracted from Lotus japonicus Gifu genome v1.2.
TTATTTTGTGTTCAAAACTCTGTGCAGGACCATTTCAAAGAAGAATCAGAAATCACTCTTGATGGAAGTGTTGATCTCCA TGGCCGTCCTGCTATCAGAGCCAAATCTGGAAGATGGGTTGCTGGAATTATCATACTCTGTAAGCTTCAAAATCATAATC TGCAGAGTAATTTTTTTAGTATATTTTTCTATTTTGTTTTTGTAATTGAGCAATGCATTAAATCATATATAAGAAAATCC TACACCTTCTTCAGTCTTTTAATTTACAAATTAAAATGCGGTTCACATAAGACTAGATAGCCATGAGACCAGGGGTCTAT CCCAGATTTATCATTGAGGTGCCAAAACGAAATGTTAAAAATCTACAATTTTTTTTGGGCTGGACTTAGAATACAAAATA TCTATATAAAAATATGGTTGATAATTAAATACATTAATATTCTCTATATAAAAATGTGGTTGATAAATACATTAAAATTC TTAGGAGTATGACCCTGCTAAATCCATCATATACGCCCTGCATTAGATTAATTCTTAGGAGTATGGCACTGTTAGATCCC TCAGATACGCCTTGCATAAGATTAATTATTCACCTCACCATCAACACAAAAGTATGAAGCGGTGCTAATGAGTTACATAA AAGAAAGAAAATATAAAATATTTTTTTGTACTTATATAAAATATTTTTTTTTTTGTACTTATATAAAATATTTTTTTTAA AGTACAAAGTAAAGTAAAGCAAAATATTTAAAGAGAGATAAAAGGAAATTTTTATATAACTAATTATATATATATATATA TATATTTATATATATATATTCTCATAAATTTATATATAGGACTAATTCACTTTGTTACCTCTTTAAAAAAAACTTTGTCA CCAATAAACATATCTTTCGTTATTTATAGTTGGTTTTATCCATATGTACAAGAAACAGAAATCTAGGAAACCGAAGTAGA GTAGCAGTAGTGTACTAGTATAACTACTAGTACTACTTCCTTTTCTCCTAATGGAGATTTCTTTTACCAGTTCCAAGATT ATATCCATCACTTGGGGTAATAAAAGTATAACTAGTATTGATATCTTGTAGTTTGAGCTTATTGATTAATAAATCCTGAA AAAGAAAAAGAAAATACACATGCAAATACGTATGTATAAATAATACGTATACGTACACGGATATAGTTCATGATGATAGA CGTGAGCAGTCGCAGGTGGCAGACACTATGGTGGTGACGTATAAGTTTGAGAAACCTGGTTGAAGAGATAGAAATTAAAT TCACAAATATAATGACGTATATATTTAGATAGCTTATCAAGGGAAGTTTGCTTTTGTGTTCTGCACAGCCACAAGCAAAC AAGCTCTTAAGTTATCTAAATCAGGAGAAACGACAACACAGATGCAGGAACGTGTTCCATATGAACCAGACGAAGCTTCT GTCAGCTTTGTTTGCATTGCCTGGAGAATTGTGCTATGCAGCTAGTTACAACCTGGCTATCGCTTACCTCATGATCCATT GTAGCATGCATATATACACTGTATCTATCTTCTAGATGGTTAAGAAATTTTATATGAAGTGGATATGAATCAAGGAAATG GAAAGTAAGAGATTCTGAATCTTGATGGAAGTTTTTGGCTTGACTTATGTGTATACACGACATCAGTCCAGAAACTGTGG CACTAAGAAGCGGTAACTTTGAAAACAGGATAAATACAAAATGGAGCAAATTTAGCATGCATGCATTTGAGAGAAATGCT TGACTGACACGTAATCAGGGTGGTGACATGTGTCATGACTCATTGACATATATCATTTTACCGCGGAATACATGTGTAGG TTTATATGTATATTTAGTATATTTTTATCGCATAGAAAAAGAGCATGCATGACAACTAAGCTTGTTATACTAGGTAATAG ATGGTTATTGCGTGTTGCTTGATTAGTGCTATAGCTAGTAATAGTATAGTTCCTTAATTATCTATCTAGATTCTAGAATC CTCTTTAGGTTATTTCTGACTCGCATCCGTTAAGTGCTGAGATAAAGAATGTGAACAAGTAATGTACAAGCATGAAATGT GTCATTGTTCTAGGAAGGCGAAATAAAATGTCTTCTTCTTTTCTATTTTCGGAGATTGGGCATCAAGACAAAAGAATTGC ATTTTTGGCCTTTTAAAAAAAACGATAAAAGAATTGTAATTTACAAATCTAATTTTATCGCGAATGAAAAAAATTCAAAA GGATATATTAATTTATGCTACAAATTATATAGGATTGTGTTTATTTGTTATACAGTAATTTGTTTTGTGGTGATGGAAGG GAATTCTCATTTACCAAATGGTATTATGGTGGTGCGAAGTGTGTAGATAATTAAATAATACCTGACACTGAAACCATGTC AATTGAGGTTGTTTGTGTGTGAATAAAAGGAAAGATAATATTATAATAAATAAATATAAATTTGTGAAAAAATAAATCAA CTTTGTTTGCGTTATATTTAAATATCGATTTTGGTGTTAATAAAAAAAGACTTGCAAAGGTGTCTTCCACCCGGCATACG GTGACATAACAGGGTGAATTCATGAATCACGTCATCACGATATGAAAATCATTTATCACTTTATAAAAAAAAGTAGTTAA AATATATATATATATATATATTTATATTTATATATTGATTTCGTTTTACAAACCTAGTCTTTCAGTGTTATGTCACCTGT GAAACCACTATTATGAGGGCGTGCTATATAAAGGCAAACCCTATCAGACCTAACGACTAACTATATGGTGATGATATATA TATATAAATATAATGTTTATAAATAAATATATGGTGATGATATATATATAAATATAATGTTTATAAATGGCAATGCAATA ATCTCTCAGTGAAAAGTTCATGGAGGCGTCATCAAAGTCCTTGGTCTATTTTAGAAAAGAGTGCACGTATATATAGATCA ACCAACACTCACAATAGTAGGGAGTGATGACTGATGCGGCTTTGACTTAATTAGCCATGCATATAAAACATTCAATGATT TTTCCTTTTATATAAAAAAGAATCATATTCCTTAGCATGCAACTCTACCTGAGCAAGGCGTGCATTGACTATTTCCGACT TCAAAAGGAACTTTAGTAAATGATCTTAACAGAATGTCTTTCTCCTCTAATTAGCTGAATCCTCACTTCAGATAAAGTGA ATCCCATTCACACACAACCTTGGACACATAGATAGATATTTATCAATGTGGCAAGCATGTAGTTATAGCTAGCTGCACAA TATATGCATGTTAGCGTGTATTTAATTCACGCATCCAGTTAAGAACAAGGAGCTAATGCTGCTTGTTATGTGATTCATTG ATTGCATTAATTAGTGAACCAAGGTCTGGCAACCCTTGCATTCTTTGGGATCGGAGTGAACCTGGTGCTGTTCCTGACAA GGGTGGTGGGACAAAACAATGCTGAAGCAGCCAACAATGTGAGCAAGTGGACTGGAACTGTTTACATCTTCTCCCTTGTG GGTGCTTTCCTCAGTGATTCTTACTGGGGAAGATATAAAACTTGTGCTGTGTTTCAGGTCATCTTTGTGATAGTAAGTAA CACCTTAATTTTTCTCTCTAGTTTTATTGTCCTTAATCTCTCTCTCTCTCTCTCTCTCTCTCCTTAACTTCTGCCTGCTA CTACATGAATCCCTAGACTAAACGAGCCTTGTGGCTTGATACAACAGGGTCTAATGTCCTTATCCCTGTCATCATACCTC TTCTTGCTAAAACCTAAAGGTTGTGGGAAGGAATCACTTCAATGTGGGAAACACTCAAGTTTGGAGATGGGGATGTTCTA CCTCTCAATCTATCTCATTGCCCTGGGGAATGGAGGTTATCAACCAAATATCGCCACATTTGGAGCTGATCAGTTTGATG AGGAGCACTCGAAAGAGGGTCGCTTAAAGGTGGCCTTCTTTAGCTACTTCTACCTAGCTCTGAACTTTGGGCAACTCTTC TCAAACACTGGTCTGGTATATTTGGAGGATGAAGGAATGTGGGCTCTAGGTTTCTGGGTGTCTGCAGGCTCTGCCTTTGC TGCACTGGTATTGTTCCTTGCAGGCACCAAAAGGTATAGACACTTCAAGCCCAGTGGAAACCCTCTCCCCAGGTTTTGCC AAGTCCTTGTCGCTGCATCGAGGAAATCGAGAGTTCAAATGCCATCAAATGGAGAGGACTTATTTAACTTGGATACAATG GAGTCTTCCACCAATGCCAATAGAAAAATCCTCCACACTCACGGATTCAAGTAAGTAGTAGACGCTATTTTCAGCTGAAA CTGCTATCTGATTTTTATATATACCTGATGCTGATAGCTAAGGCTGGCTGCATGATATGCTTTACCAGCATTTCTTGGCC ATTTTTTATTCTACCAAGCTAACGATTTGATCAATTTGCCATTTGTTGCTGCATTGAAGGTTCTTGGACAGGGCAGCGCT TATATCTTCAAGAGATGTAGTGGACCAGAAAGACGGCCGTTACAACCCCTGGCGGCTCTGTCCTGTAAGTCAAGTTGAAG AAGTGAAATGCATACTGAGACTTCTTCCAATATGGCTCTGTACTATAATATACTCCGTGGTTTTCACACAAATGGCTTCT CTTTTTGTGGAGCAAGGTGCTGTCATGGATTCCACTGTTTTCCATTTCAGAATACCAGCAGCTAGCATGTCTTGCTTTGA TATCCTCAGTGTATGTCTCTTCATTTTCTTTTACCGTCGAGTTCTTGATCCATTTGTCGGAAAACTTAAAAAGTCAAACT CCAAGGGACTCACAGAGCTTCAGAGAATGGGGGTTGGACTTGTTATAGCTGTGATGGCAATGCTTTCAGCTGGAATAGTT GAGTGCTACAGGCTCAGGTATGCAAAACAAGAATGTACCGACTGTAAAGACACGAGCACTTTATCCATCTTCTGGCAAAT CCCCCAGTACGCATTCATAGGAGCTTCTGAGGTGTTTATGTATGTAGGCCAGTTAGAGTTCTTCAATGCGCAGACACCAG ACGGCTTAAAGAGCTTCGGAAGTGCACTTTGCATGACATCAATTTCCCTTGGGAACTACGTGAGTAGCTTAATTGTTAGC ATAGTTATGAAGATCTCCACCGAGGATCATGTGCCAGGGTGGATCCCTGCAAACCTCAATAAAGGTCACCTAGACAGGTT TTTCTTCCTCTTAGCTGCCTTGACATCGATCGACTTGATCGCCTATATTGCATGTGCAAAGTGGTACAAGAATATACAAC TGGATGAGAAACGTGGTGGAGAGAATAATGAGCCTGGTAGCTTCTCAGTCTGA
CDS sequence (LotjaGi2g1v0415800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTTATCCCTGTCATCATACCTCTTCTTGCTAAAACCTAAAGGTTGTGGGAAGGAATCACTTCAATGTGGGAAACA CTCAAGTTTGGAGATGGGGATGTTCTACCTCTCAATCTATCTCATTGCCCTGGGGAATGGAGGTTATCAACCAAATATCG CCACATTTGGAGCTGATCAGTTTGATGAGGAGCACTCGAAAGAGGGTCGCTTAAAGGTGGCCTTCTTTAGCTACTTCTAC CTAGCTCTGAACTTTGGGCAACTCTTCTCAAACACTGGTCTGGTATATTTGGAGGATGAAGGAATGTGGGCTCTAGGTTT CTGGGTGTCTGCAGGCTCTGCCTTTGCTGCACTGGTATTGTTCCTTGCAGGCACCAAAAGGTATAGACACTTCAAGCCCA GTGGAAACCCTCTCCCCAGGTTTTGCCAAGTCCTTGTCGCTGCATCGAGGAAATCGAGAGTTCAAATGCCATCAAATGGA GAGGACTTATTTAACTTGGATACAATGGAGTCTTCCACCAATGCCAATAGAAAAATCCTCCACACTCACGGATTCAAGTT CTTGGACAGGGCAGCGCTTATATCTTCAAGAGATGTAGTGGACCAGAAAGACGGCCGTTACAACCCCTGGCGGCTCTGTC CTGTAAGTCAAGTTGAAGAAGTGAAATGCATACTGAGACTTCTTCCAATATGGCTCTGTACTATAATATACTCCGTGGTT TTCACACAAATGGCTTCTCTTTTTGTGGAGCAAGGTGCTGTCATGGATTCCACTGTTTTCCATTTCAGAATACCAGCAGC TAGCATGTCTTGCTTTGATATCCTCAGTGTATGTCTCTTCATTTTCTTTTACCGTCGAGTTCTTGATCCATTTGTCGGAA AACTTAAAAAGTCAAACTCCAAGGGACTCACAGAGCTTCAGAGAATGGGGGTTGGACTTGTTATAGCTGTGATGGCAATG CTTTCAGCTGGAATAGTTGAGTGCTACAGGCTCAGGTATGCAAAACAAGAATGTACCGACTGTAAAGACACGAGCACTTT ATCCATCTTCTGGCAAATCCCCCAGTACGCATTCATAGGAGCTTCTGAGGTGTTTATGTATGTAGGCCAGTTAGAGTTCT TCAATGCGCAGACACCAGACGGCTTAAAGAGCTTCGGAAGTGCACTTTGCATGACATCAATTTCCCTTGGGAACTACGTG AGTAGCTTAATTGTTAGCATAGTTATGAAGATCTCCACCGAGGATCATGTGCCAGGGTGGATCCCTGCAAACCTCAATAA AGGTCACCTAGACAGGTTTTTCTTCCTCTTAGCTGCCTTGACATCGATCGACTTGATCGCCTATATTGCATGTGCAAAGT GGTACAAGAATATACAACTGGATGAGAAACGTGGTGGAGAGAATAATGAGCCTGGTAGCTTCTCAGTCTGA
Protein sequence (LotjaGi2g1v0415800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLSLSSYLFLLKPKGCGKESLQCGKHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGRLKVAFFSYFY LALNFGQLFSNTGLVYLEDEGMWALGFWVSAGSAFAALVLFLAGTKRYRHFKPSGNPLPRFCQVLVAASRKSRVQMPSNG EDLFNLDTMESSTNANRKILHTHGFKFLDRAALISSRDVVDQKDGRYNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVV FTQMASLFVEQGAVMDSTVFHFRIPAASMSCFDILSVCLFIFFYRRVLDPFVGKLKKSNSKGLTELQRMGVGLVIAVMAM LSAGIVECYRLRYAKQECTDCKDTSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYV SSLIVSIVMKISTEDHVPGWIPANLNKGHLDRFFFLLAALTSIDLIAYIACAKWYKNIQLDEKRGGENNEPGSFSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 74 | 74 | - | – | |
| PANTHER | 1 | 471 | 471 | 8.3E-284 | ||
| PANTHER | 1 | 471 | 471 | 8.3E-284 | – | |
| CDD | 13 | 454 | 442 | 0.0 | – | |
| Pfam | 26 | 414 | 389 | 4.6E-89 | ||
| SUPERFAMILY | 32 | 463 | 432 | 8.24E-19 | ||
| TMHMM | 32 | 54 | 23 | - | – | |
| Phobius | 75 | 97 | 23 | - | – | |
| TMHMM | 75 | 97 | 23 | - | – | |
| Phobius | 98 | 102 | 5 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 103 | 123 | 21 | - | – | |
| Phobius | 124 | 226 | 103 | - | – | |
| TMHMM | 227 | 249 | 23 | - | – | |
| Phobius | 227 | 248 | 22 | - | – | |
| Phobius | 249 | 259 | 11 | - | – | |
| Phobius | 260 | 285 | 26 | - | – | |
| TMHMM | 264 | 283 | 20 | - | – | |
| Phobius | 286 | 305 | 20 | - | – | |
| TMHMM | 304 | 326 | 23 | - | – | |
| Phobius | 306 | 326 | 21 | - | – | |
| Phobius | 327 | 348 | 22 | - | – | |
| Phobius | 349 | 368 | 20 | - | – | |
| Phobius | 369 | 388 | 20 | - | – | |
| Phobius | 389 | 413 | 25 | - | – | |
| Phobius | 414 | 432 | 19 | - | – | |
| Phobius | 433 | 455 | 23 | - | – | |
| TMHMM | 433 | 455 | 23 | - | – | |
| Phobius | 456 | 476 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0415800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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