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LotjaGi2g1v0421200.2

Overview

Field Value
Gene ID LotjaGi2g1v0421200
Transcript ID LotjaGi2g1v0421200.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:91925433..91930126) extracted from Lotus japonicus Gifu genome v1.2.

ATGGAAGGAGGCGTTGACCACTTGGCTTTCGAGAGGAACAAGGCGCAGTTCGATGTTGACGACATGAAGATCATCTGGGC CGGTTCTCGTTCCGAATTCGAGCTCTCCGATCGGATTTCTCGCCTCGTCGCCAGCGATCCGGTTAATTTCCCCCCTTTCA CTCAACATTTCTGCCAATTTGATTCATGCTTTTTCTGATCCCTCGCTAATTCCTGTGAAAAAAACAATTCAACTGTATTT ATATATTTATTTTCTGATAATTGTTTAAAGAACTTGGTCAAAGTAACGTTACATTTTTATCTAGTTGGGTATTACGGGAA TTTAGGGCCTCAGTGGATACTTAGATTTTGATAGAATAATAATATGTTATTTATATAAAGTCAATCATGTGTGTTCCCCA CAAAATTTGAGCTATTTGCTTCATATGAGAGTCTCTATGAGTGAATATTACCTTTATTATTTAATTAAAAAGTTTGATTT CAGCATAATGTTAGGTTGATTTTTTTTTTGATAGTAATGTTAGTAAATTAGTACATGACGATCACGGCTTGTTAGTTTGA ATTCTGAATCCTTGATTGGTTGTATTTTCTAGGCTTTCAGAAAGGATGACAGAACCACGCTTGGCAGAAAGGACCTATTT AAGAACACTTTGAGAAAAACAGCTTATGCATGGAAAAGGATCCTTGAGCTCCGTCTTAATGGTGTGTCTTCTGTTCTTTG TGTTGTTTGCATTTGGTTTATAATGTTGAACAGCACTCCCTATTACATCAAAATGTACCATTCTTTATCGTGTTGTCAGT TGTAATCTTACAGAAAAGGAAGCTGCCAAGCTTAGGTCCTTTGTGGATGAACCTGCTTTTACGGATCTTCATTGGGTATG ATTTTATTTCTTGTCCTGGTTTCGTCTCTACCTTTCATGCCTTGTTTTATTGATATAGAAGGAATATGTAGATTACCATG ATAAAAAGTGAGGGAATGGGATCATTTCTGCTGGGTGCAATATTAGTTTAAGGATTTCAAAGGATTAGCTTTATCTGCTT GTAGTAAATTTTAGCTGTTCATATCCTATTGCAGGGAATGTTTGTGCCGGCTATCAAAGGACAAGGCACGGATGAGCAGC AGCAAAAGTGGTTGCCTCTAGCTTACAAGATGCAAATTATTGGTTGCTATGCCCAAACTGAACTTGGTCATGGATCCAAT GTTCAAGGGCTAGAAACAACTGCAACATTTGATCCCAAAACAGATGAATTTGTTATTCATAGTCCCACTTTAACTTCCTC CAAAGTAAGTGAAATGGGTGATAATTTCTGAGAGCCTTTACCGGTCTTTTACAATGTAATTTACTCTTTCAGATTTTAGA GTCCTACAATCATGGAAAACTGTCGAACCATTTTAATGCATTTCACTGAGTGTACTTGTTTGTTTTTGGATATACCATCA CTCTTTTGTTGTTGATTTAAACAGTGGTGGCCTGGTGGATTGGGTAAGATATCAACGCATGCTGTTGTGTATGCTCGTCT AATTACTGATGGTCAAGAGCAAGGAGTGCATGGTAATTTCCAAACTTTATCATCCAAGTTTCTGGTGTTAGAATCAGACA TTTATTGATTATATATGTCCAATATGAAGGTTTCATTGTCCAGCTGCGGAGCTTGGATGATCACTTACCTCTTCCAGGCA TTACTGTTGGTGATATTGGAATGAAATTTGGGAGTGGAGCATATAATACCATGGATAACGGGGTTCTAAGATTTGACCAT GTTAGAATTCCAAGGAATCAAATGTTAATGAGGTAGTTCAATTTTACCTATTTGTCCACTCTAGCCTCACTAGAAGAAAA TCCAACAATTGTAATTGGGGATTTCGTGGTGTATAGTATATAATAAATGAATGATCTTTGGAGGCAAAGTGACTGAAGTT CAAACCACAATTCAGTATACTTGTATCAGTTGAATCCACAGGGTGGTAAACTGAATCTAATTCTAATAACAGTATTGACA AACACGACAACAATAACAGTATCTGGTTTGCTTAAGGTATTTTGTCTATGAATTGAGAACAATACTCTGGCTCATTTTCT TACTTTTAATCAGGCAAGCTATTAAATTCCTACTTAGGAGTAAACCCTAAACCGTAATTGAAGGTTGAAATTGCTACATG ATTGGTTTCATTTTTTTTTTCTGTTGAATGCAATTGGTAATGGGTTTCCTTTCAGAATTATTTTCATGGGTAAACTGTAA ACAAATGATGATTGAGAATAACAGACGGGAATGAAGGGTTGTGTTCATCCTGTGTATAGCTCATCACTCCTTTCTGATGG TTAGGGGGCATGGAGTTCTGTCATGAATCAAGCATATAGTAACAGGAATTTTCAATAATTATAAATGTCACGATGTGCTT GTCATAAAGCTAGCATGTAGTAACATGACTTGTCAATCACTATAAATGTCAAGGTGTGCATGTTAGTTTTGCCAACAGAT TAATGGTGTTTTGTTTTTAATCTACCAGGGTCTCTCAGGTAACCAGAGAAGGAAAATATGTGCAGTCCAATGTTCCAAGA CAATTAGTTTATGGTACCATGGTATATGTGAGACAAGCAATTGTGTCTGATGCATCGATTGCTTTGTCACGAGCAGTTTG TATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGTGGTCTTGAGTCGCAGGTTAGCTTTAAAA CCTTTTATTGATGCAGAATTGTTGCATGTTGGAGAATTCTGATTTTATTGAGATGTTCTAATGGGGATATCTTTTTCTAA TAAGCAAATTTAAGAAACAAAATGGAGGCTGAATCTGAAATTACAGTGCACAAAAAAATAAGCCAATTTACCTTTATTTT AGGTTGCATTCATGAAGGTTTGCTTTTTACCAGAACATGTTTTTGTTGAACTTATAGTGGGAAGGTTGATGGGATTTCTC CTTATGCTTGGATTTACATTCGTTGTTGAATGAGTGTCTTTGTGCTCTCTGTTTCTATTTAGGTGATTGATTACAAGACA CAGCAGGCTAGGCTCTTCCCTTTGCTAGCTTCTACTTATGCTTTCAGGTTTGTTAGTGAGTGGCTGAGTTGGCTTTATAC GGATGTCACACAAAGATTACAAGCTGGAGATTTTTCAACATTGCCTGAGGCACATGCATGCACTGCTGGATTGAAATCAT TGACTACTTCAATCGCTGCTGTATGTTATTACTTGAATTCATTTTTCTACCGTTTGACCTTAGTGAATTTAGCTAATTTT AAGCTGTTTAGATAACATTTTTTGGACACAATCTTTAGATACTATTTAAAACATTGTTTATTATTTCATGTTGAGGTCTT TTTTCTATGTTGTGCTGTTCTTTAGGTGAATTGGCATTAATGAAATTTTACGGCTTTTCTCTCTCTATATATATTGAATC TTAGTTCCTTTCTGTGTGCCTTATGCAGTTCATGTTGTTATTTGAAATGTTAATGTTTTGAAATGGGTGGTTGTCATTGT GTATCAATGTTAAAACTTTCAAATGAATTGTCTACAGATTTTTAACCATGATTGTACATGCATATAATCCTCCATCCCAT TTGTTTCCAGTTTTAATTTTAAAGTAAAATTAATACGACAGAGCATAGCATGTTGTGGTTTATATATGATGCAAACATTT GCCGAACATAAACAAATGTTTAGAGGAGCCAAAATAATATTTTAATGCACAAATATAAGAATGTGTGTATAGATATGTTT ATATATCTGTTAGGATATAGTTTGTTGACATAATATCTCAACAATATATATATACATATATATATATATTATTTTTATAA ATAATTAATTATGCATATATAGTTTTAAAAAAAAAATTACGCATATATAACCTTTTAAAAGAAAAAATATCCGTTGGAAC CATGGCTCCCCGTCATTGAAATATCCTTCTTTTGCTTGCAAGATCAATTATGCATCATATTTATTTCACTATTCTGTAGT CTGTACTTCCACCGAACCGCTTAATTTTCCTGGAATGCTGGTCATTATAATCTGTTACCATTAATTTATTATTCATGTCA TCTATTTCTACGTGGGGTAACTGCCTGGATGATTATTTTTCTCCTTGTTTAAATCGTTTAACTGTTTCTTTTGTTGTTAA TGTGCTATTATCCTTTGATGGTATCTTACTATATGGATTTCATTTTATAACTGTGATCTTTTCAAGTTCAAATAATATTA AATTAACTTGATATTGCAGGATGGAATTGAAGAATGTCGTAAACTATGTGGTGGTCATGGTTATCTTAATAGCAGTGGTC TTCCTGAGCTATTTGCAGTGTATGTTCCTGCTTGCACTTATGAAGGAGACAATACTGTGCTGCTTTTACAGGTTACTTGA ATGCTAAATATTTTGCATTTCATTTTGTTTATCATTATATAATGTATCTTTACAATTTCCTTCGTTATCTTGGTTTGTTT TGACATCTAGAAATTTTCATGTAGGTGGCAAGGCATCTTGTGAAGACTATTTCTCAGCTGGGCTCTGGAAATAAGCCTGG TGGTACTACAGCTTATTTGGCTCGAGTGGAACAATTGATGCAATATCACTCTGATGTTAAAAAAGGTACCATGAAATTGG ATAATATACAATCTTAAAAGATCTTGTGATATCCAAGTCAAATAGGGTTTCAAT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0421200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGGAGGCGTTGACCACTTGGCTTTCGAGAGGAACAAGGCGCAGTTCGATGTTGACGACATGAAGATCATCTGGGC CGGTTCTCGTTCCGAATTCGAGCTCTCCGATCGGATTTCTCGCCTCGTCGCCAGCGATCCGGCTTTCAGAAAGGATGACA GAACCACGCTTGGCAGAAAGGACCTATTTAAGAACACTTTGAGAAAAACAGCTTATGCATGGAAAAGGATCCTTGAGCTC CGTCTTAATGAAAAGGAAGCTGCCAAGCTTAGGTCCTTTGTGGATGAACCTGCTTTTACGGATCTTCATTGGGGAATGTT TGTGCCGGCTATCAAAGGACAAGGCACGGATGAGCAGCAGCAAAAGTGGTTGCCTCTAGCTTACAAGATGCAAATTATTG GTTGCTATGCCCAAACTGAACTTGGTCATGGATCCAATGTTCAAGGGCTAGAAACAACTGCAACATTTGATCCCAAAACA GATGAATTTGTTATTCATAGTCCCACTTTAACTTCCTCCAAATGGTGGCCTGGTGGATTGGGTAAGATATCAACGCATGC TGTTGTGTATGCTCGTCTAATTACTGATGGTCAAGAGCAAGGAGTGCATGGTTTCATTGTCCAGCTGCGGAGCTTGGATG ATCACTTACCTCTTCCAGGCATTACTGTTGGTGATATTGGAATGAAATTTGGGAGTGGAGCATATAATACCATGGATAAC GGGGTTCTAAGATTTGACCATGTTAGAATTCCAAGGAATCAAATGTTAATGAGGGTCTCTCAGGTAACCAGAGAAGGAAA ATATGTGCAGTCCAATGTTCCAAGACAATTAGTTTATGGTACCATGGTATATGTGAGACAAGCAATTGTGTCTGATGCAT CGATTGCTTTGTCACGAGCAGTTTGTATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGTGGT CTTGAGTCGCAGGTGATTGATTACAAGACACAGCAGGCTAGGCTCTTCCCTTTGCTAGCTTCTACTTATGCTTTCAGGTT TGTTAGTGAGTGGCTGAGTTGGCTTTATACGGATGTCACACAAAGATTACAAGCTGGAGATTTTTCAACATTGCCTGAGG CACATGCATGCACTGCTGGATTGAAATCATTGACTACTTCAATCGCTGCTGATGGAATTGAAGAATGTCGTAAACTATGT GGTGGTCATGGTTATCTTAATAGCAGTGGTCTTCCTGAGCTATTTGCAGTGTATGTTCCTGCTTGCACTTATGAAGGAGA CAATACTGTGCTGCTTTTACAGGTGGCAAGGCATCTTGTGAAGACTATTTCTCAGCTGGGCTCTGGAAATAAGCCTGGTG GTACTACAGCTTATTTGGCTCGAGTGGAACAATTGATGCAATATCACTCTGATGTTAAAAAAGGTACCATGAAATTGGAT AATATACAATCTTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0421200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEGGVDHLAFERNKAQFDVDDMKIIWAGSRSEFELSDRISRLVASDPAFRKDDRTTLGRKDLFKNTLRKTAYAWKRILEL RLNEKEAAKLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKT DEFVIHSPTLTSSKWWPGGLGKISTHAVVYARLITDGQEQGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGSGAYNTMDN GVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQAIVSDASIALSRAVCIATRYSAVRRQFGSHNGG LESQVIDYKTQQARLFPLLASTYAFRFVSEWLSWLYTDVTQRLQAGDFSTLPEAHACTAGLKSLTTSIAADGIEECRKLC GGHGYLNSSGLPELFAVYVPACTYEGDNTVLLLQVARHLVKTISQLGSGNKPGGTTAYLARVEQLMQYHSDVKKGTMKLD NIQS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10909
2 476 475 0.0 –
PANTHER
PTHR10909:SF373
2 476 475 0.0 –
SUPERFAMILY
SSF56645
9 264 256 3.27E-53
IPR009100
Pfam
PF14749
18 133 116 5.1E-32
IPR029320
Gene3D
G3DSA:1.10.540.10
18 133 116 5.3E-42
IPR037069
Gene3D
G3DSA:2.40.110.10
134 270 137 1.9E-61 –
Pfam
PF02770
135 247 113 6.4E-12
IPR006091
SUPERFAMILY
SSF47203
277 460 184 1.56E-58
IPR036250
Gene3D
G3DSA:1.20.140.10
280 450 171 2.3E-65 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016627
Molecular function Oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
Subterm of
GO:0050660
Molecular function Flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0421200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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