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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0422400 |
| Transcript ID | LotjaGi2g1v0422400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT4G16650.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|A0A0R0LDL6|A0A0R0LDL6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0422400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92046363..92052302) extracted from Lotus japonicus Gifu genome v1.2.
GAAGGTGAGGAGGTTTTTCAACCTGTTATCGAACCTGCCTCTGTTACCGCATCCTGAAAACAACGACAAGAGGAAGCAGC ATCAGCATGTTTGTTGGAGATCAACGACGACGATGCAGTTTCAGCAGCGGAAGCCAATTTCATGGTCTGTGGTTTGCGGA TTGATGCTGTTCGGGTTGGGTCTGATTTCTCTTCTCACGGGTCACATGGCTTCTGATCTTGAATGGTACTCCCAGCGATT GGTCCAGCGAACTTTCTACTCCAGAACCGTAATTGTTTCTATTCAATTCCATTCTTCATCTTCCTCACTCATTGCAATTT CGTTTTGTTTGATTTGATTGGTTCTGAATTTGTTTCCAGGATGGGAGTTATCGTGCGCCGATTGATATCTGGAAATCACA ATATGCTAAATACTACTATGGATGCAGTGACAGGGGGCGCCATTTTACTCGTCAGTTTCTTCTTCATCAACCCAATTTCA TGAATTTATTACTTTTTCTTCTGGGTTTGTTGAATTGGACATTTTAGGCATGCATGGCGTTTTACGGATACTATAGATAA TATCATTACTAACTTATGACAGTGCTAAGAAATTCACGGATGGCATCTTCTTATTCCTGCTCTTTTAATTATGCTTGTAA TAAGTGCAATTGTGCAAATCAAAGGGGAATTATCCTGTGAATGATTTTACTATGTATTCTCTTGGGTCCATCAAGATAGA GGGAGATGTCAACAATAGGATCCAAGTAACGTGAATGAAATGAAGGAAAATTTTGTGTGTAATGTTAGAGAAAAGTATAG TTTACCGAAAAGTTTTATTGCATAAGTATACTTGCTGTGTTGTATGGGATGAATGGTGGTAACTGGTACATAAATGAGAA TGTTATGATTAACGAGTAGTCACATAAGACAAAACGGAATTGGGAATAAAATTATTAGCAAGAAAGTTAGGTTAGTGGCC GTTGTAGAGTTTTGTCTCTAGTGGTTTGCACACATGTGGAGAAATCCTGTAAGGAGATTAGACCAAATAGAGAATGGTTC AATAGTTACAGCTTTACAGGGACATGAAGAGCAAGGGAATTATAAGCCAAATCATTCAAAGAACTTTGAATTTAAGTAGA CTATTATTAGACATGATTCATGACAGGGAATTATAGCGTCATTTGATCCATAATCACCTAGTGGGAAAGGAATTTGGGTG TTGTTGTTGAACACTCTTATTTCTTACTAAGCTGTGTCACAAGCCAGACTGATAAAATCAAGGTTATATAGCACTTCTAT GTGGTGCCGTAAAAGGACTTATCAACAGATTGAAGTTGAACAACTCCATTTTATATTTTGATTTGTTTGTGCCTCTATAA AATTTGCTCAGAAATATATTAACTTCTCTGTGTCAATTTCCTCTATTATTGTGGTAAATGCATAATATAGCGGCTGTGCG TGAGCGGATGTCAACTGGCTACTTGCTTATTGCAACTAGTGGAGGATTGAATCAACAAAGAACTGGGGTAAGTTGGCATA AATTTTTTTATGATCAGCTGTCTTAGGCAGGGCATGAGTTTTATGATATGCTAGATCATGATCATAAGGGTTTTATTTAA GATCAGCCATCTTAGTTGCTCCCCTACTGATTAAAGTATCAGAAAGTTGAGTTGTATACAATTTTCTCTTATCTAGTTGG CTCATTGAGTTGTTTTCAGTGAACATGAAGCTTGGGTTGTTTCTCTTTCCAAGCTGAAGCTAGGTAGATATTTATTTAAT GATAATAAATAAGTTGATTATGTGGAAATGACAATCATGTTCCTGCATCCAGATAACAGATGCAGTTGTTGTTGCACGAA TTCTAAATGCTACACTAGTCGTACCTGAGTTGGATCATCATTCTTTTTGGAAGGATGACAGGTAATCTGCAGATTCTATC ATACATTTCCTATTTGAATCGAGTTCATCAGCTCATTTAATAAGGACACTTTTGTTTGAATACAGTGACTTTATCAATGT TTTCGATGTTGATTGGTTCATTTCATATCTCGCAAAAGATGTTACTATTGTCAAAAGAGTTCCTGATAAGGTCATGCGGT CAATGGAGAAACCCCCATATACGATGCGTGTCCCAAGGAAATCAGAGCCTGATTATTATCTTGATCAAGTTTTGCCAATA CTTTTGAGACGACAGGTGTGGCCACTTTACTTATTGCGATTGACACATGCTTGCAATTTCATATTTCAATAGAAGATGTT TTGATTCATTAAATAACTGTTATGATAATAACACTAGTAATTGGTGTTCTTTTATCATTTGCAGAATGTATCTGTGAATT TGGCTGGGGCAACTAACTAAAATTTATGAGATTTTGCAGGTTGTGCAGTTGACCAAGTTTGACTATAGACTTGCAAGTAA CCTTGATGATGAGCTACAGAAACTACGTTGCCGTGTTAATTTTCATGCTTTGAGATTTACAAAACCTATACAAGAACTTG GTGAAAAACTTGTTGTCAGAATGCGAAAGATGGCAAACCGTTTTATAGCAGTCCATTTGAGGTTTCTTTGATGTTTCCCT TTTCACAACTTCTTTACATTGTCTGAGATTTGGAATCATTATAACTGTTTGAACTATTTCAAAATGTTGAATTGGAAGTA TTTGTTTACTTCTACGTTGGGGGGTTTCGGAAGGGGACCTCTCAAATTCAACTTTCTCATGCAACTCAATAATAGCAATA AGTTAATAACAGTTTCTTGTTGTTGTTTCATTCAAAAGTATTTGGGATGCAAGGGGGTTCCATGGTAGTTGCCACTAACA ACAGCATTCGTGATTGATTTATGACAGGTTTGAACCAGATATGCTAGCATTTTCAGGCTGTTATTTTGGTGGGGGAGAAA AAGAAAGACATGAGCTTGGTGAAATCAGAAAAAGGTGGACAACGTTACCTGTAAGACTACTTTCTATTGACTTCTAAGTT CTAGTGATAAAATCTTAGTCATTCAACTAGTAAGAAATGACATTTTGTCCTTTCTTAACTGCGCTGACTTTCTGAAGGTG TTGAAACCAGGGTTGTTAATGGCGGATAGCGTAGTGTAGCGGCAAGCCCAAAAAACGCTATTTCGAGCGCTATTGCGGCG CTATAGCGGAAAATAGCGCAAATAGCGGTGAATAGTGGAGTAGCGGTGAACCCCCAGGCCGCTACGCTATAGGCTATTGC GCGCTATAGCGCGCTATTAACAAGCCTGGTTGAAACCTGCATTCTTTCGTGACACATAACCTGATTATTTTTCCATATAA TATGTTAGGATTAATTATATTAGGATTAGTTATTATAAATAGGAGTGCCCTCCTTAGGTTAGAGTTATGGATTAAATTAT TATTGAGTTGTAAAGGGAACCAGCCCTATTGTAGAGGAACCAGCCTCTTGGTTCTAAGGGGAACCAGCCTCTTAGTTCTT ATCTATCTTTATTTTCCAGTCTTTTATAATAAAATACCAAAAATATTCCCATTTTCCCTATTTTCTCTATCGTTTCTCCA CGTTAGGATTTTCGGGTCCTAACATAATACTTCTCAAATTTGAGGCTAATTATTTTTAATGGCAAAACAGGATTTAAGCC CAGATGGAGAACGGAAGCGAGGCAAATGTCCTCTTACTCCTCATGAAGTAGGTTTGATGCTGAGGGCACTTGGTTTTAGA AATGACACATACCTCTATGTTGCATCAGGAGAAATATATGGTGGGGATGAGACTATGCAGCCTCTGAAAGATCTTTTCCC TAACATGTATACAAAGGAGATGCTTGCTAACGAAGAGCTGAAACCTTTCCTTCAATTCTCATCCCGCCTTGCTGCTGTTG ACTACATTGTTTGTGATGAAAGTGATGTATTTATCACTAACAACAATGGTAACATGGCCAAGATTCTTGCAGGTCGAAGG TAAGACTATATAAAATTGCTCTGATGTTCTCATTATGTTTGTTTAGTTCATCAACAGACTCCCTGGCTTCTAAAAATCAC ATTAAACACAATCAAGAAAGGATTATCTTCATCTAGTAATGGAATAACTAAAATTATAACTATGATTGTTCCATTATGAA GTGCCTAGTGTTGCATTATTTACTATTAAGCTATTTTGAGAACATGTGGGAGAGCTGTGGTTTGGCTTGAAGTTGGGAAA ACTTATTGTAATTTACTCAATACTTGTTCGCTAGCAATCTTGTAGAAAAATTAAGATAGATTCTCTAATGAACTTTAGAA TTGTGGAAAGAAACAGTGTAGAGGATATAGACTGGGTTAAAATTGGTTCAGGATTCAGGTACAGACAATGTCTTCAAAAG CTTAAGTTATTGAGTGAAACACATGAATGGTTTTATATTATATTTCTCACTCACACAAGAGCTCACTGGGCTTGAAGCGG CGTAAACAATGGACAAACACATTTACCTTGTGCTGTAATTCATTTTTTTATTAGAATAATGGGGGTAACAAGGATCAAAC TCTAGACCACTTGGTCATAGAAGCTCTGGCTATGTTATGAACCAACTACCCCAAAGCTTAAGCTGTTGAACGATAGGTAC CCGCATCGTCCCAGGGTTTAGTTAGTTAGTTAAGGGAGTTCACTTAGTTTGAGAGTTAGTTACAGAGAGTTATCATCTTT TTGAAACATTTGGTAATTGGGCTTTAGGGAGAGGAGCTAGGTGCCTAGGACTCTCTGATTACTCAGAGCATCTTGTAGTT TTCTATACTGAATAATACTACCAGTTTTCTTCTTCTTGGCTGGTTCCTTTAATTGGACAAAGACATATGAATGATTTTAC ATTATATTTCTCACTATTCTTCTAGCCTTCTAGACGCTAGCTCTCATGACATGAACATTATTGAGGAGCAGTTGATCTTG TAGCAGGATCAACAATTGCTTATTTGGTATATTTTGGACTCAGCAAAGTTCAGTTATAGGGCCTTACCTTCTTAAGTTCC AATGAAAGTTGAGGTTGAATCATATATGACCAAATATAGTTCCCATACCATAACCTTGTTAGATTAGTCGTTGCTTATTA GCTTAGCCGACAATGCCCTTCACTGCGGAGTGGGGACCATTTTTCAGATGTTGTTTAGACCTTAGGCACCTTCATTGAAC TAAATAACAAAACCTGATCTGATATGTTATGGATAGTAGATTAGGTTGGGTTCATTCAAGTCAATCTTTTCTTGTATGAT AAAAAAGGCAACTACTTTGCTAATACTTGTATTCTAGAATCAATTAATGTTCTAATGTTCAGCCAAAATTTGTTTTCCCC TATAATCAACAATTGAGGAGATTTAAATTTCCTTACTGAAATTCCTCTTTTACCAAAAAAGAAGTGAGTTGGTTTCATTT TTTCCTTTTTTTTTTTGGCTAAAGAAAAATTTGTAATAGCTTGCTTCAGGAGGTTTCTTGAAAGCCTGTATTTGCATTTC ATTTTATAACAAAGAGAAAATTCAAAGCTTGATGCTAAAGTATGCTGGATCAGGGTCTTGAGCTGTCATGCCCATGTGCT TCCTGTGGGTCGTAATTGCTTTTCCTGACTAAACTTTTTTTTTCCTTAACCTTTTACTTTTGGCGTTCTGTTAAATCTTT CACTTTGTTTATAACAGGAGATATATGGGTCACAAAAGAACAATTAGGCCAAATGCAAAGAAGCTCAGCACACTGTTCAT GGGAAGGCATCAGATGGAGTGGGATACCTTCGCGAGAAAGGTTAAGGCATGCCAAAGAGGATTTATGGGAGAGCCAGATG AGATGAGACCGGGACGAGGTGAATTTCATGAATATCCAAACTCTTGCATATGTGAGAGACCATATGTGGATGAAGAAGAA CGCTATACAAACATGGATACTGTCTCCCTAAACACGTTGCAATAATTACGAGTGTCTCACAGCAAAAGCTGAATCCCACG TTCAATGAGCCAACACATGA
CDS sequence (LotjaGi2g1v0422400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTTTCAGCAGCGGAAGCCAATTTCATGGTCTGTGGTTTGCGGATTGATGCTGTTCGGGTTGGGTCTGATTTCTCT TCTCACGGGTCACATGGCTTCTGATCTTGAATGGTACTCCCAGCGATTGGTCCAGCGAACTTTCTACTCCAGAACCGATG GGAGTTATCGTGCGCCGATTGATATCTGGAAATCACAATATGCTAAATACTACTATGGATGCAGTGACAGGGGGCGCCAT TTTACTCCGGCTGTGCGTGAGCGGATGTCAACTGGCTACTTGCTTATTGCAACTAGTGGAGGATTGAATCAACAAAGAAC TGGGATAACAGATGCAGTTGTTGTTGCACGAATTCTAAATGCTACACTAGTCGTACCTGAGTTGGATCATCATTCTTTTT GGAAGGATGACAGTGACTTTATCAATGTTTTCGATGTTGATTGGTTCATTTCATATCTCGCAAAAGATGTTACTATTGTC AAAAGAGTTCCTGATAAGGTCATGCGGTCAATGGAGAAACCCCCATATACGATGCGTGTCCCAAGGAAATCAGAGCCTGA TTATTATCTTGATCAAGTTTTGCCAATACTTTTGAGACGACAGGTTGTGCAGTTGACCAAGTTTGACTATAGACTTGCAA GTAACCTTGATGATGAGCTACAGAAACTACGTTGCCGTGTTAATTTTCATGCTTTGAGATTTACAAAACCTATACAAGAA CTTGGTGAAAAACTTGTTGTCAGAATGCGAAAGATGGCAAACCGTTTTATAGCAGTCCATTTGAGGTTTGAACCAGATAT GCTAGCATTTTCAGGCTGTTATTTTGGTGGGGGAGAAAAAGAAAGACATGAGCTTGGTGAAATCAGAAAAAGGTGGACAA CGTTACCTGCACTTGGTTTTAGAAATGACACATACCTCTATGTTGCATCAGGAGAAATATATGGTGGGGATGAGACTATG CAGCCTCTGAAAGATCTTTTCCCTAACATGTATACAAAGGAGATGCTTGCTAACGAAGAGCTGAAACCTTTCCTTCAATT CTCATCCCGCCTTGCTGCTGTTGACTACATTGTTTGTGATGAAAGTGATGTATTTATCACTAACAACAATGGTAACATGG CCAAGATTCTTGCAGGTCGAAGGAGATATATGGGTCACAAAAGAACAATTAGGCCAAATGCAAAGAAGCTCAGCACACTG TTCATGGGAAGGCATCAGATGGAGTGGGATACCTTCGCGAGAAAGGTTAAGGCATGCCAAAGAGGATTTATGGGAGAGCC AGATGAGATGAGACCGGGACGAGGTGAATTTCATGAATATCCAAACTCTTGCATATGTGAGAGACCATATGTGGATGAAG AAGAACGCTATACAAACATGGATACTGTCTCCCTAAACACGTTGCAATAA
Protein sequence (LotjaGi2g1v0422400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQFQQRKPISWSVVCGLMLFGLGLISLLTGHMASDLEWYSQRLVQRTFYSRTDGSYRAPIDIWKSQYAKYYYGCSDRGRH FTPAVRERMSTGYLLIATSGGLNQQRTGITDAVVVARILNATLVVPELDHHSFWKDDSDFINVFDVDWFISYLAKDVTIV KRVPDKVMRSMEKPPYTMRVPRKSEPDYYLDQVLPILLRRQVVQLTKFDYRLASNLDDELQKLRCRVNFHALRFTKPIQE LGEKLVVRMRKMANRFIAVHLRFEPDMLAFSGCYFGGGEKERHELGEIRKRWTTLPALGFRNDTYLYVASGEIYGGDETM QPLKDLFPNMYTKEMLANEELKPFLQFSSRLAAVDYIVCDESDVFITNNNGNMAKILAGRRRYMGHKRTIRPNAKKLSTL FMGRHQMEWDTFARKVKACQRGFMGEPDEMRPGRGEFHEYPNSCICERPYVDEEERYTNMDTVSLNTLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 296 | 296 | 3.0E-106 | ||
| Phobius | 1 | 12 | 12 | - | – | |
| Phobius | 1 | 33 | 33 | - | – | |
| PANTHER | 3 | 297 | 295 | 6.7E-288 | – | |
| PANTHER | 3 | 297 | 295 | 6.7E-288 | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 13 | 28 | 16 | - | – | |
| Phobius | 29 | 33 | 5 | - | – | |
| Phobius | 34 | 469 | 436 | - | – | |
| Pfam | 93 | 384 | 292 | 1.6E-66 | ||
| CDD | 93 | 389 | 297 | 6.48846E-157 | ||
| Gene3D | 221 | 393 | 173 | 5.1E-6 | – | |
| PIRSF | 292 | 454 | 163 | 4.5E-60 | ||
| PANTHER | 295 | 458 | 164 | 6.7E-288 | – | |
| PANTHER | 295 | 458 | 164 | 6.7E-288 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0422400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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