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LotjaGi2g1v0425800.3

Overview

Field Value
Gene ID LotjaGi2g1v0425800
Transcript ID LotjaGi2g1v0425800.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Acid beta-fructofuranosidase; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase; TrEMBL-Plants: tr|A0A151TJF4|A0A151TJF4_CAJCA Acid beta-fructofuranosidase; Found in the gene: LotjaGi2g1v0425800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:92352160..92354953) extracted from Lotus japonicus Gifu genome v1.2.

ACACTTACTCTTTCATAGACGAAAATTGAGCATTCTCTAGATATATTTGCATAGATAAGGAATAAATTAAATTTGTCAAA ACTCCAAAGGACACTAACTTTTTCTTGCTCTTATTTTTGGGTGACTTTGGCTTCTCTGATGATGGAATTTGGTTTCCTAT GCTACAGATCCTAATGGTAAGAGCCTCCTTCCTTCTCTCATTGTTTTCTGCAATTTGGAAAACAGAGTCTCAACCTCTGT TCTTGAACGACAGCTAAACAAGTTTGTTTTAGAACCACATGACACAATTATGTGATCAAATTGAACCTTTTGACATTGTT GTTGCAATTTCAGGTCCAATGTACTACAAGGGATGGTACCATTTCTTCTACCAGTACAATCCCAAGGGTGCAGTTTGGGG AGACATCATCGTTTGGGGACACGCCGTGTCAAGGGACTTGATCCACTGGCTTCACCTTCCAGTGGCAATGGTCGCCGACG AATGGTACGACAAAAATGGTGTGTGGACTGGCTCAGCCACCATTTTACCCAATGGTGAAGTGATCATGTTGTACACCGGT TCAACCAACGACTTGGTGCAGGTCCAGAACCTTGCCTACCCTGCAGACCCATCTGATCCCTTACTCATTGATTGGATCAA ATACCCTGGAAACCCAGTTCTGTTCCCACCACCAGGTATCGGTACCAAGGATTTTCGTGACCCAACCACCGCTTGGCTCA CCTCTGAAGGAAAATGGCGCATTTCCATCGGCTCGAAGCTTAACAGAACTGGAATCGCCTTGGTTTATGACACAGAGGAT TTCAAGACATTTGAGCGTGTTGAGGGAATCCTTCATGCTGTGCCTGGCACTGGCATGTGGGAGTGTGTTGATTTCTTCCC TGTTTCTTCTACTGTTGAAAATGGCTTGGACACATCATTTAATGGGGCTGGTGTGAAGCATGCGATGAAGGTTAGCCTAG ATGATGATAGACATGATTATTACGCGCTGGGGAGTTATGATGAAAACAATGTCAAGTTCACACCAGATGATTTCAAGAAC GATGTTGGTATTGGATTGAGGTATGACTATGGTGTCTTTTATGCATCCAAGACATTTTATGATCAGAGGAAAAAAAGGAG AGTGCTGTGGAGTTGGATTGGAGAGTCGGATAGTGAACATGCTGATGTTGCCAAAGGTTGGGCATCGGTTCAGGTAAGTT TATAACTTATTGTACTTTTCTTGTTTATAAATTGTGTTTTGGGGAATAATGACATCGGTTATGCTCTAATTGAACAGGGT ATTCCAAGAACAGTGATGCTTGATAAAAAAACCGATAGCAACTTGCTTCAATGGCCTGTTGCAGAGGTGGAGAGTTTGAG ATTGAAAAGTGACAAGTTTGAGAATCTAAAGGCGAAGCCAGGGACAGTGGTGCCCCTAGACATTGCTACAGCCACACAGG TTTGAGCAACGTTGAATTTTTCTAGTGATGAGTAATTTTTCAAGTGATACTAAATGACATGAAATGCAACAGTTGGATAT TGTGGCTGAGTTTGAGATAGATAAGGAGGCGTTGGAGAAGACAGCCCGATCCAATTTGGAGTACAAGTGCGATAGCAGTG GTGGATCAGCTGAACGTGGTGCCTTGGGACCTTTTGGTCTTCTGGTTTTAGCGGATGATGGTCTTTCTGAATATACTCCT GTCTACTTCTATATGGTTAAAGGAAGAGATGGACATCTCAAGACTTACTTCTGCTCTGATCAATCAAGGTATTAGAGTTG TTTTGTTTTGACCTTGAAGTGGTGTTTTTGTTTGAAAAAATAAAAAATTGTATTAAGTTGTGATAAAAATACAATGTTGA ATTTGTTTATATCTTTTTGGTAGGTCTTCTCTGGCGACTGATGTTGATAAGAATATCTTTGGAAGCTTTGTTCCAGTACT AAAAGATGAAAAGATGTCTATAAGGATATTGGTAAGTTAACATTCCTTGAATTTTATTTGGTTCATAGCATCTTATGTTA ATTATATGCTCATGAACTAGACCAACTAATAGACTTAAAAGTATATAATTTAGGTGGACCATTCTATAGTGGAAAGCTTT GCTCAAGGTGGAAGGACGTGCGTGACATCCCGGGTATATCCAACAAGGGCAATGTATGGAACCGCTCGATTGATGTTGTT CAATAATGCTACTGAGGCTACTGTGACTGCCTCACTAAAGGTTTGGCAGATGAACTCTGCATTCATACGACCATTCCACC CTGACCAGAGGACATAAATGGCAGGGATAAGAGAATTAGAAGATTCAATTACATAACATAGCTGAAAGATGTTGCATCGC CAACTGGTACTGCTCGCATTTAATCCATGGCACCTTCTTATCAATCCACCTAAAGCTCTGGATTTTGGAGCAAAAGCACA CCGCTCCTTCAATTTTGTCCAAATCTTTTTCCATTTGCATGTGTCTATTGTTATGAATTAATTATCCCAAAAGCTTAAGC TGTTAGGCAAAAGACACATGAATGATTATATTTCAAATACACCTCCTCACGCAAGAGCTCACTTGGGCTTTAAGCGAGAA CATTGCAAATGTCCACCTACTATGTGCTAAAATTCATCTTTTTTTATTAGAAAATTTGGGAGCAACGAGGGTTGAGTTCT AGACCACTAGGTCATAGAGGCTGTGATACCATGTCATGAACCAATTATCCCAAAAGATTAAGTTGTTGGGTAAATGACAC ATGAATGGTTATATTTCTAACACTTGTAACGATATTTACAATAATCAATGAACGAAAGAAATACAAAAAAGATA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0425800.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTACTACAAGGGATGGTACCATTTCTTCTACCAGTACAATCCCAAGGGTGCAGTTTGGGGAGACATCATCGTTTGGGG ACACGCCGTGTCAAGGGACTTGATCCACTGGCTTCACCTTCCAGTGGCAATGGTCGCCGACGAATGGTACGACAAAAATG GTGTGTGGACTGGCTCAGCCACCATTTTACCCAATGGTGAAGTGATCATGTTGTACACCGGTTCAACCAACGACTTGGTG CAGGTCCAGAACCTTGCCTACCCTGCAGACCCATCTGATCCCTTACTCATTGATTGGATCAAATACCCTGGAAACCCAGT TCTGTTCCCACCACCAGGTATCGGTACCAAGGATTTTCGTGACCCAACCACCGCTTGGCTCACCTCTGAAGGAAAATGGC GCATTTCCATCGGCTCGAAGCTTAACAGAACTGGAATCGCCTTGGTTTATGACACAGAGGATTTCAAGACATTTGAGCGT GTTGAGGGAATCCTTCATGCTGTGCCTGGCACTGGCATGTGGGAGTGTGTTGATTTCTTCCCTGTTTCTTCTACTGTTGA AAATGGCTTGGACACATCATTTAATGGGGCTGGTGTGAAGCATGCGATGAAGGTTAGCCTAGATGATGATAGACATGATT ATTACGCGCTGGGGAGTTATGATGAAAACAATGTCAAGTTCACACCAGATGATTTCAAGAACGATGTTGGTATTGGATTG AGGTATGACTATGGTGTCTTTTATGCATCCAAGACATTTTATGATCAGAGGAAAAAAAGGAGAGTGCTGTGGAGTTGGAT TGGAGAGTCGGATAGTGAACATGCTGATGTTGCCAAAGGTTGGGCATCGGTTCAGGGTATTCCAAGAACAGTGATGCTTG ATAAAAAAACCGATAGCAACTTGCTTCAATGGCCTGTTGCAGAGGTGGAGAGTTTGAGATTGAAAAGTGACAAGTTTGAG AATCTAAAGGCGAAGCCAGGGACAGTGGTGCCCCTAGACATTGCTACAGCCACACAGTTGGATATTGTGGCTGAGTTTGA GATAGATAAGGAGGCGTTGGAGAAGACAGCCCGATCCAATTTGGAGTACAAGTGCGATAGCAGTGGTGGATCAGCTGAAC GTGGTGCCTTGGGACCTTTTGGTCTTCTGGTTTTAGCGGATGATGGTCTTTCTGAATATACTCCTGTCTACTTCTATATG GTTAAAGGAAGAGATGGACATCTCAAGACTTACTTCTGCTCTGATCAATCAAGGTCTTCTCTGGCGACTGATGTTGATAA GAATATCTTTGGAAGCTTTGTTCCAGTACTAAAAGATGAAAAGATGTCTATAAGGATATTGGTGGACCATTCTATAGTGG AAAGCTTTGCTCAAGGTGGAAGGACGTGCGTGACATCCCGGGTATATCCAACAAGGGCAATGTATGGAACCGCTCGATTG ATGTTGTTCAATAATGCTACTGAGGCTACTGTGACTGCCTCACTAAAGGTTTGGCAGATGAACTCTGCATTCATACGACC ATTCCACCCTGACCAGAGGACATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0425800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MYYKGWYHFFYQYNPKGAVWGDIIVWGHAVSRDLIHWLHLPVAMVADEWYDKNGVWTGSATILPNGEVIMLYTGSTNDLV QVQNLAYPADPSDPLLIDWIKYPGNPVLFPPPGIGTKDFRDPTTAWLTSEGKWRISIGSKLNRTGIALVYDTEDFKTFER VEGILHAVPGTGMWECVDFFPVSSTVENGLDTSFNGAGVKHAMKVSLDDDRHDYYALGSYDENNVKFTPDDFKNDVGIGL RYDYGVFYASKTFYDQRKKRRVLWSWIGESDSEHADVAKGWASVQGIPRTVMLDKKTDSNLLQWPVAEVESLRLKSDKFE NLKAKPGTVVPLDIATATQLDIVAEFEIDKEALEKTARSNLEYKCDSSGGSAERGALGPFGLLVLADDGLSEYTPVYFYM VKGRDGHLKTYFCSDQSRSSLATDVDKNIFGSFVPVLKDEKMSIRILVDHSIVESFAQGGRTCVTSRVYPTRAMYGTARL MLFNNATEATVTASLKVWQMNSAFIRPFHPDQRT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:2.115.10.20
1 315 315 3.5E-214
IPR023296
SUPERFAMILY
SSF75005
1 306 306 1.88E-92
IPR023296
Pfam
PF00251
1 305 305 2.9E-95
IPR013148
SMART
SM00640
1 460 460 1.2E-226
IPR001362
CDD
cd18624
1 293 293 5.33029E-160 –
PANTHER
PTHR31953:SF41
1 511 511 1.3E-267 –
PANTHER
PTHR31953
1 511 511 1.3E-267 –
SUPERFAMILY
SSF49899
305 504 200 4.27E-38
IPR013320
Pfam
PF08244
308 499 192 8.8E-31
IPR013189
Gene3D
G3DSA:2.60.120.560
316 501 186 3.5E-214 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0425800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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