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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0430700 |
| Transcript ID | LotjaGi2g1v0430700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxygen-dependent choline dehydrogenase; TAIR: AT1G12570.1 Glucose-methanol-choline (GMC) oxidoreductase family protein; Swiss-Prot: sp|Q9S746|HTH_ARATH Protein HOTHEAD; TrEMBL-Plants: tr|I1K0E1|I1K0E1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0430700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92747206..92751275) extracted from Lotus japonicus Gifu genome v1.2.
CAGGCGAAGAAAGGGAGTAAACATATCACAAAGTCTGCGTTTTCTTGAATCACTGTGGGCCACAGTTCCACATGTACAAC ATTAAACACAGCAGCATTACTTTTGGTTCCTGCGATAAATGCAGTAAGTAATCTTTACGTCAGTCAAAGTTTTTGCCGAC GAGATCGTTGGTTTTCCCACTTTATATATGGAAGCATAAGGGGTTGGTTTCAGGTCAGAGTAGAACATTAAACCAGATAA CAAAGTCATTCCATTGGCAACTTCAAGTGCCTGACAATGTCTGCTGTAATGACTGTTTGGTGGTTGCAGCAGTTGGTTCT GCTTTCTCTTGCTGGGATTCTCTTCTCTCCTGAACTTTGTGCTTCACAGAATGGTACTAATGTTATACTTTCATTTCTCT CTGTTTTGCTCAGTAACTTGTTGCACTTTGGTTCATAAGATTGTAGGGTGAAACTGAAACAGGTACCACATTGTTTAGTG TGTCGGTCTGGATGGAATTTCATTGGATAATAATTAGTACTAATATTATAATGTGACGATAATACACATTGTTCAGTATG GTCTAATTGAGTTTAGAGGCATTATGCTCATAGCAAAGGACACTGCTTTACTTTGAGTAAATGGCTTAATTAGAAGAAAC CCTTTTTAGGCTTTAGCATGTTACTTACATCAAGGTAGATGAAGTTCATCATGTGATTAGATTGCAGGCTAAAGTTTTAG TTTTATCTGAAATTAAGTAACTTACAAGTTTTCCGGTGAATTGTCTGATATTGGCCTAAAATGACTTGTGAGATGAAATA TTACTATAATGTGATTAGTTTAGTTTGTCTGTGGAAACTGAAAGACACAACTTTCACTTCAGACTAGAAAAATAGAAAGG AACATCGGTAACTACCATATATTCATGTGTGCTTGTTTTTAACTAGCATACATTTTTGAGAAATTCTTTTCAAATCTCTG TGAGATGAGATGTGTAACTTGAGGATGAGAGGTGCTGAGCTTGAATGTTTATTTTGATTTGCATGATTGCATCCATTTCC AATTGAATTCTATTTTTTTTTTTAACTTCAGCTAGAGTAGCAGAGAGATAGAAAAAAGACAAATAGAATCATGTGAAATC ATATATCACATCATTGCATCTCTGTGAGAAAAAGAAAGATCCTCTGGTATATTCAAAAAGTTTTAATTAGTGATTGATGC ATGCAACCACTTTTTAAACATCTGCAACCACAAAAATTAGCTCATATTCATCAGAAAAAGCAGGGGAAGTCATCTTCATG TGGGTCTAAGTCCAACTATTTGAAACCTTACCAATCATTAGATGTTTCAACAACATATTCCCTATCTTTGACATCTGATC AGATTATCATTAATTTCTCATAAAACAAACAAGATTACAAGATACTTTAATCAGCCTATAACACATTGTAGGACTAGCAA GATGAATTAAAAAAACATCATAAAATTGAATGGATTCTGAGATTGCCCTGTGTTTTTGTTGTTGATTTATTCATTGAATC ACTGTATACATGCAGCTGGGAAATACAGTTTCATGCAGGATGCAACTTCAGCTTCAAGAATCTCCTACTATGACTACATT GTGATTGGCGGCGGCACCGCGGGGTGCCCGTTAGCCGCCACCTTGTCCCAGAATTACAGTGTTTTGCTCCTGGAACGTGG CGGTTCCCCTTATGGGAATCCCAACATCACAAACTTAGCTCAATTCGGCGTTGCCCTCACCGACACGTCACCAACCTCTC CCTCTCAGCGCTTTGTCTCCACAGACGGCGTCATCAACTCTAGAGCTCGTGTCCTCGGCGGTGGAAGCTGTTTAAACGCC GGTTTCTACACTCGTGCTAGCCCGCATTATGCCAGGTAAGCAAAAGTGCATGTTTGAAAATCCTTCTACAATTAATTCTA AAGTCAAAATTATGCGCGTATGTCTATTGCTTGCGCGACATAAAATTTCTGGATTCGTCACTGCTGTTTAGGGAGGCTGG TTGGGATGGAAAGTTAGTGAATGAGTCCTACCAATGGGTGGAGCGAGTGGTGGCGTTTGAGCCTCCAATGCGGCAGTGGC AATCAGCTGTTAGGGATGGATTGTTGGAAATTGGGGTGAAGCCTTACAATGGCTTCACTTATGATCATATTACTGGGACT AAAGTTGGAGGCACCATCTTTGACAACCAAGGTCACAGGCACACTGCTGCTGATCTTTTGCAATATGCTAACCCTAGTGG AATTACTCTGCTATTTCATGCCACTGTGCACAAGATCTTGTTCAGGCATAGAGGTATAGTTCTGGTCTAATTCTTCATCA TATTCAAGCATGCAGACCAATTGTTCGAAGAAAAGCCCCTGTTAATGACTTGTGAATGGTGAAATTAATTGAGCAGGTGG ATCAAGGCAAGCAGCTCATGGAGTGATATTCAGGGATGGAACTGGAGCAGAACACAGGGCATATCTGAATCAAGGGCCCA AGGGCGAGATAATTGTGTCATCCGGTGCACTTGGCAGCCCACAACTTCTGATGTTGAGTGGAATTGGAGCAGCACATCAC CTTCAGGAACACAACATTAGTGTGGTGTTGGACCAGCCATTGGTTGGACAGGGTATGTCTGATAACCCAATGAACGCCAT CTTTGTCCCCTCTCCGATCCCGGTAGAGATTTCCCTCATTCAGGTTGTCGGCATCACCGCCTTTGGCAGCTACATTGAAG CCGCCAGTGGTGAATACTTCTCTGGTCCTCCTCCAAGAAATGACTACGGAATGTTTTCCCCTAAGGTACCACATTCACAC TACTCTACTTGTTACACTTCACATTCATTCATCTTTTCATAAATTGTTTCGTCCGGACTATGTAAATTCTGGTTGACTGG TTCACAAGTTAAAAGAGTTTTTCTGCATATTCAATTTTAGGAACATATTGTAAATAACATTATCCAATGTTAGTAATAAA AACATGTTTCATGGGTGGATTGTGGACCACTTTTTAACATGGTACTCTCACACTGGTCAATTTGTCAACGATCAAAATCT TGCTTCAGATATGATGTCTCAAATTCAATTTCCTGTTCACAATTCATGAATGCAGATTGGTCAATTCTCCAAGTTGCCTC CAAAGCAAAGGACACCAGAAGCGATGGCGAAAGCAATAGAGTTGATGGGGAGCCTTGAAGAGGCAGCATTCAGAGGCGGG TTCATTCTGGAGAAAATCATGGGTCCCATTTCAACAGGTCACTTGGAGCTTCGAAACCGCGATCCAAATGAGAACCCGTC GGTGACCTTCAACTACTTCCAGGATCCCAGAGACTTGGAGAGATGTGTGCAGGGCCTTAGCACCATCGAGAAAATCATTG AATCCAAGGCTTTCTCTCCCTTTAAGTACAACACCATGCCAGTGTCTATGTTGCTTAACATCACTGCGAATTCTCCTGTT AACTTGTTGCCCAAACACGCGAATTCTTCAATGTCTCTGGAGCAGTTCTGCAAAGACACCGTGATGACCATATGGCACTA CCACGGTGGCTGCCAAGTTGGTAGAGTTGTTGATACTGATTACAAAGTTCTTGGTGTAGATGCACTGCGTGTTATTGATG GTTCTACCTTTAATTATTCTCCCGGAACTAATCCTCAAGCCACTGTTATGATGCTTGGAAGGTATCATATTCATATCATA TGCTTCTTCTTCATTTCTCAATCCCTCTTTAAATAGTTGCTGTATATAGATAATTCAGTGGTGCTTACTTTTTATTTTCT TAATATGGTGCAGGTACATGGGAGTCAAAATATTGAGGGAGAGACTTGCTGCTGAAGAAAGCTAGTAATGTTAGGAGTTG TGTAGTAATTATTAGTTTCTCTCTGTTTGAGGTTCATGAAATGGTGTGATCAGATTAGAGAGAACTTAGTCTATATTTCA GATTTTACTTATATGTTACTTCACATTGAAATTAATGAGGAATGTCTTGGTATCAAGAGAAGAGAAGAAAATGAAATACA TTATTCTCATTGAATGAGTTGAAGAGTGAAGATTCAACACTTTATACACTAATAGATCAGAAGTTCAGAA
CDS sequence (LotjaGi2g1v0430700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGCTGTAATGACTGTTTGGTGGTTGCAGCAGTTGGTTCTGCTTTCTCTTGCTGGGATTCTCTTCTCTCCTGAACT TTGTGCTTCACAGAATGCTGGGAAATACAGTTTCATGCAGGATGCAACTTCAGCTTCAAGAATCTCCTACTATGACTACA TTGTGATTGGCGGCGGCACCGCGGGGTGCCCGTTAGCCGCCACCTTGTCCCAGAATTACAGTGTTTTGCTCCTGGAACGT GGCGGTTCCCCTTATGGGAATCCCAACATCACAAACTTAGCTCAATTCGGCGTTGCCCTCACCGACACGTCACCAACCTC TCCCTCTCAGCGCTTTGTCTCCACAGACGGCGTCATCAACTCTAGAGCTCGTGTCCTCGGCGGTGGAAGCTGTTTAAACG CCGGTTTCTACACTCGTGCTAGCCCGCATTATGCCAGGGAGGCTGGTTGGGATGGAAAGTTAGTGAATGAGTCCTACCAA TGGGTGGAGCGAGTGGTGGCGTTTGAGCCTCCAATGCGGCAGTGGCAATCAGCTGTTAGGGATGGATTGTTGGAAATTGG GGTGAAGCCTTACAATGGCTTCACTTATGATCATATTACTGGGACTAAAGTTGGAGGCACCATCTTTGACAACCAAGGTC ACAGGCACACTGCTGCTGATCTTTTGCAATATGCTAACCCTAGTGGAATTACTCTGCTATTTCATGCCACTGTGCACAAG ATCTTGTTCAGGCATAGAGGTGGATCAAGGCAAGCAGCTCATGGAGTGATATTCAGGGATGGAACTGGAGCAGAACACAG GGCATATCTGAATCAAGGGCCCAAGGGCGAGATAATTGTGTCATCCGGTGCACTTGGCAGCCCACAACTTCTGATGTTGA GTGGAATTGGAGCAGCACATCACCTTCAGGAACACAACATTAGTGTGGTGTTGGACCAGCCATTGGTTGGACAGGGTATG TCTGATAACCCAATGAACGCCATCTTTGTCCCCTCTCCGATCCCGGTAGAGATTTCCCTCATTCAGGTTGTCGGCATCAC CGCCTTTGGCAGCTACATTGAAGCCGCCAGTGGTGAATACTTCTCTGGTCCTCCTCCAAGAAATGACTACGGAATGTTTT CCCCTAAGATTGGTCAATTCTCCAAGTTGCCTCCAAAGCAAAGGACACCAGAAGCGATGGCGAAAGCAATAGAGTTGATG GGGAGCCTTGAAGAGGCAGCATTCAGAGGCGGGTTCATTCTGGAGAAAATCATGGGTCCCATTTCAACAGGTCACTTGGA GCTTCGAAACCGCGATCCAAATGAGAACCCGTCGGTGACCTTCAACTACTTCCAGGATCCCAGAGACTTGGAGAGATGTG TGCAGGGCCTTAGCACCATCGAGAAAATCATTGAATCCAAGGCTTTCTCTCCCTTTAAGTACAACACCATGCCAGTGTCT ATGTTGCTTAACATCACTGCGAATTCTCCTGTTAACTTGTTGCCCAAACACGCGAATTCTTCAATGTCTCTGGAGCAGTT CTGCAAAGACACCGTGATGACCATATGGCACTACCACGGTGGCTGCCAAGTTGGTAGAGTTGTTGATACTGATTACAAAG TTCTTGGTGTAGATGCACTGCGTGTTATTGATGGTTCTACCTTTAATTATTCTCCCGGAACTAATCCTCAAGCCACTGTT ATGATGCTTGGAAGGTACATGGGAGTCAAAATATTGAGGGAGAGACTTGCTGCTGAAGAAAGCTAG
Protein sequence (LotjaGi2g1v0430700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSAVMTVWWLQQLVLLSLAGILFSPELCASQNAGKYSFMQDATSASRISYYDYIVIGGGTAGCPLAATLSQNYSVLLLER GGSPYGNPNITNLAQFGVALTDTSPTSPSQRFVSTDGVINSRARVLGGGSCLNAGFYTRASPHYAREAGWDGKLVNESYQ WVERVVAFEPPMRQWQSAVRDGLLEIGVKPYNGFTYDHITGTKVGGTIFDNQGHRHTAADLLQYANPSGITLLFHATVHK ILFRHRGGSRQAAHGVIFRDGTGAEHRAYLNQGPKGEIIVSSGALGSPQLLMLSGIGAAHHLQEHNISVVLDQPLVGQGM SDNPMNAIFVPSPIPVEISLIQVVGITAFGSYIEAASGEYFSGPPPRNDYGMFSPKIGQFSKLPPKQRTPEAMAKAIELM GSLEEAAFRGGFILEKIMGPISTGHLELRNRDPNENPSVTFNYFQDPRDLERCVQGLSTIEKIIESKAFSPFKYNTMPVS MLLNITANSPVNLLPKHANSSMSLEQFCKDTVMTIWHYHGGCQVGRVVDTDYKVLGVDALRVIDGSTFNYSPGTNPQATV MMLGRYMGVKILRERLAAEES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 13 | 23 | 11 | - | – | |
| PANTHER | 23 | 579 | 557 | 0.0 | – | |
| PANTHER | 23 | 579 | 557 | 0.0 | – | |
| Phobius | 24 | 28 | 5 | - | – | |
| PIRSF | 28 | 581 | 554 | 2.5E-101 | ||
| Phobius | 29 | 581 | 553 | - | – | |
| SUPERFAMILY | 50 | 574 | 525 | 1.68E-49 | ||
| Gene3D | 51 | 564 | 514 | 1.4E-160 | ||
| Pfam | 51 | 324 | 274 | 1.8E-31 | ||
| Gene3D | 168 | 515 | 348 | 1.4E-160 | – | |
| ProSitePatterns | 283 | 297 | 15 | - | ||
| SUPERFAMILY | 320 | 521 | 202 | 5.49E-37 | – | |
| Pfam | 420 | 565 | 146 | 5.3E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on CH-OH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0430700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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