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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0431500 |
| Transcript ID | LotjaGi2g1v0431500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT4G23030.1 MATE efflux family protein; Swiss-Prot: sp|O82752|DTX49_ARATH Protein DETOXIFICATION 49; TrEMBL-Plants: tr|A0A0S3T628|A0A0S3T628_PHAAN Protein DETOXIFICATION; Found in the gene: LotjaGi2g1v0431500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92838667..92840747) extracted from Lotus japonicus Gifu genome v1.2.
CCTTGATATTATTGGCTATTGCTCCATTTTTCAGATACTTCCAAGAATCTCAAATATTATTATAGCACAAATCTTCCCTT TTTAAACCCCTCTACCAAAGTGCAAAATTCCCAAAAGAGTCTACACAAAAACACCCCCACTCTCTTTCTCTCTTCTGTCC CCCCTGTCTGTATGCAAGAGAAACTGTCCCAACCATGTGCCAATTATCATCTACCTCTAGTTTGTGTGAAAGCAATGAAG GGAATCCAAATCATCATCATGTATCCACAACCAAAACACAGGAAGAGCCTGACATGTTCACCCTTTTGATCCCCAAATCC CCAACAAAATCCCAACAACAAGAAAAGACCCATTATTCTTATTCTTATTCTCTGGCCCTCAATGAAGCAAAATGCATAGT AAACATTGCATGGCCTATGGTCTTAACCGGCCTATTACTTTACTCTCGGTCTATCATTTCCATGCTCTTCCTCGGTCGGG CGGGCGAGCTTGCTCTTGCGGGCGGCTCACTCGCAATTGGATTCGCCAACATCACCGGCTACTCCATTCTCTCAGGCCTC GCCATGGGAATGGAGCCGATATGTGGGCAAGCATTCGGGGCGAGGAGATTCAAACTCCTCGGCCTAACGATGCAGAGGAC AGTGATTCTCCTCCTCCTAACTTCAATCTTCATCGCATTCTCATGGCTCAACATGAAGAAAATCTTACTCCTATGCGGCC AGCAAGAAGACATCGCCACCGAAGCTCAATCCTACATTCTCTACTCTCTACCGGATCTCGTCGCGCAATCGCTGCTCCAC CCTCTGCGAATCTACCTTCGAAGCCAATCAGTTACTCTGCCATTAACATACTGTGCAGTTCTCTCAATCCTCCTTCACAT CCCCATCAACTACCTCCTCGTCTCGGTTCTTCACCTCGGAATCAGAGGCATTGCTTTAGGCGCTGTTTGGACAAATTTCA ATCTGGTTATCTCCTTGATTATCTACATCTGGGTTTCTGGGATTCACAAGAAAACATGGACTGGAATCTCCTCTGCTTGC TTCAAAGGTTGGAAAGCGCTTTTGAATCTAGCGATTCCGAGCTGCATTTCGGTTTGCCTCGAATGGTGGTGGTATGAAAT CATGATTTTACTCTGCGGTTTGTTGATAAATCCTCATGCAACCGTTGCCTCAATGGGGGTTCTGATTCAAACCACTGCAT TGATCTATATTTTCCCATCTTCGTTGAGTTTTGCTGTTTCCACAAGAGTTGGAAACGAACTCGGAGCTGAGAATCCTCAC AGAGCGAAGCTCGCAGCGCTAATAGGCCTCTGTTTCAGTTTCGTGTTGGGATTTTCAGCATTGTTCTTTGCGTTTTCTGT GAGGAATGTGTGGGCTTCAATGTTCACAATGGATCCTCAGATAATTGCTCTGACTTCAATGGTGTTGCCGATTATTGGAC TCTGTGAGCTCGGAAACTGTCCTCAGACCACGGTTTGCGGCGTTTTGAGGGGGACGGCGAGGCCGAAGCTGGGGGCTAAT GTGAACTTGTGTTGCTTCTACTTCGTCGGAATGCCGGTGGCGGTGTGGTTGAGTTTCTTTGTTGGGTTTGATTTCAAAGG CTTGTGGCTGGGTTTGTTGGCGGCTCAGGCGGCGTGTATGGTGACCATGTTGGTGGTTTTGGCTCGGACCAACTGGGAAG GTCAAGCTCAGAGAGCTAAGGAACTCACTTCATTGGATTCTGGTGAAGAAGGAGGAGATGAAGATGAAGATGAAGCTGCA AAACAATGTTCAGATTCATTAGTTTGATGATTCATGACCGCGGGAAAATTATTCTTTTAGCTAGATTTTAGATCGATGAT TCAAAGGATCAAATTGGTTCTTTGCTTATTGAATTAATTTTAAGAGGGTTAACATTTTCATTATATCTTTCATTATATAT ACTCTTGATCTTGGTATAAAAATTTAAGTGTATGATTAACACAAATTTTGTGTATGCATGAATGTAGGAGATTGGTGACT TTAGGGAACCTGAGTCATGTAAATTGAATGATATGTGGAAGTTTGTTAATTCAATTTTTTAAAGTAAATTTTAACGACAA G
CDS sequence (LotjaGi2g1v0431500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCCAATTATCATCTACCTCTAGTTTGTGTGAAAGCAATGAAGGGAATCCAAATCATCATCATGTATCCACAACCAA AACACAGGAAGAGCCTGACATGTTCACCCTTTTGATCCCCAAATCCCCAACAAAATCCCAACAACAAGAAAAGACCCATT ATTCTTATTCTTATTCTCTGGCCCTCAATGAAGCAAAATGCATAGTAAACATTGCATGGCCTATGGTCTTAACCGGCCTA TTACTTTACTCTCGGTCTATCATTTCCATGCTCTTCCTCGGTCGGGCGGGCGAGCTTGCTCTTGCGGGCGGCTCACTCGC AATTGGATTCGCCAACATCACCGGCTACTCCATTCTCTCAGGCCTCGCCATGGGAATGGAGCCGATATGTGGGCAAGCAT TCGGGGCGAGGAGATTCAAACTCCTCGGCCTAACGATGCAGAGGACAGTGATTCTCCTCCTCCTAACTTCAATCTTCATC GCATTCTCATGGCTCAACATGAAGAAAATCTTACTCCTATGCGGCCAGCAAGAAGACATCGCCACCGAAGCTCAATCCTA CATTCTCTACTCTCTACCGGATCTCGTCGCGCAATCGCTGCTCCACCCTCTGCGAATCTACCTTCGAAGCCAATCAGTTA CTCTGCCATTAACATACTGTGCAGTTCTCTCAATCCTCCTTCACATCCCCATCAACTACCTCCTCGTCTCGGTTCTTCAC CTCGGAATCAGAGGCATTGCTTTAGGCGCTGTTTGGACAAATTTCAATCTGGTTATCTCCTTGATTATCTACATCTGGGT TTCTGGGATTCACAAGAAAACATGGACTGGAATCTCCTCTGCTTGCTTCAAAGGTTGGAAAGCGCTTTTGAATCTAGCGA TTCCGAGCTGCATTTCGGTTTGCCTCGAATGGTGGTGGTATGAAATCATGATTTTACTCTGCGGTTTGTTGATAAATCCT CATGCAACCGTTGCCTCAATGGGGGTTCTGATTCAAACCACTGCATTGATCTATATTTTCCCATCTTCGTTGAGTTTTGC TGTTTCCACAAGAGTTGGAAACGAACTCGGAGCTGAGAATCCTCACAGAGCGAAGCTCGCAGCGCTAATAGGCCTCTGTT TCAGTTTCGTGTTGGGATTTTCAGCATTGTTCTTTGCGTTTTCTGTGAGGAATGTGTGGGCTTCAATGTTCACAATGGAT CCTCAGATAATTGCTCTGACTTCAATGGTGTTGCCGATTATTGGACTCTGTGAGCTCGGAAACTGTCCTCAGACCACGGT TTGCGGCGTTTTGAGGGGGACGGCGAGGCCGAAGCTGGGGGCTAATGTGAACTTGTGTTGCTTCTACTTCGTCGGAATGC CGGTGGCGGTGTGGTTGAGTTTCTTTGTTGGGTTTGATTTCAAAGGCTTGTGGCTGGGTTTGTTGGCGGCTCAGGCGGCG TGTATGGTGACCATGTTGGTGGTTTTGGCTCGGACCAACTGGGAAGGTCAAGCTCAGAGAGCTAAGGAACTCACTTCATT GGATTCTGGTGAAGAAGGAGGAGATGAAGATGAAGATGAAGCTGCAAAACAATGTTCAGATTCATTAGTTTGA
Protein sequence (LotjaGi2g1v0431500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCQLSSTSSLCESNEGNPNHHHVSTTKTQEEPDMFTLLIPKSPTKSQQQEKTHYSYSYSLALNEAKCIVNIAWPMVLTGL LLYSRSIISMLFLGRAGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGARRFKLLGLTMQRTVILLLLTSIFI AFSWLNMKKILLLCGQQEDIATEAQSYILYSLPDLVAQSLLHPLRIYLRSQSVTLPLTYCAVLSILLHIPINYLLVSVLH LGIRGIALGAVWTNFNLVISLIIYIWVSGIHKKTWTGISSACFKGWKALLNLAIPSCISVCLEWWWYEIMILLCGLLINP HATVASMGVLIQTTALIYIFPSSLSFAVSTRVGNELGAENPHRAKLAALIGLCFSFVLGFSALFFAFSVRNVWASMFTMD PQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANVNLCCFYFVGMPVAVWLSFFVGFDFKGLWLGLLAAQAA CMVTMLVVLARTNWEGQAQRAKELTSLDSGEEGGDEDEDEAAKQCSDSLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 70 | 70 | - | – | |
| PANTHER | 51 | 510 | 460 | 8.0E-255 | – | |
| PANTHER | 51 | 510 | 460 | 8.0E-255 | – | |
| CDD | 64 | 500 | 437 | 1.39153E-175 | – | |
| Phobius | 71 | 92 | 22 | - | – | |
| TMHMM | 71 | 93 | 23 | - | – | |
| TIGRFAM | 74 | 471 | 398 | 5.3E-68 | ||
| Pfam | 74 | 234 | 161 | 1.2E-36 | ||
| Phobius | 93 | 98 | 6 | - | – | |
| Phobius | 99 | 119 | 21 | - | – | |
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 120 | 148 | 29 | - | – | |
| TMHMM | 144 | 166 | 23 | - | – | |
| Phobius | 149 | 167 | 19 | - | – | |
| Phobius | 168 | 212 | 45 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| Phobius | 236 | 240 | 5 | - | – | |
| Phobius | 241 | 267 | 27 | - | – | |
| TMHMM | 245 | 267 | 23 | - | – | |
| Phobius | 268 | 287 | 20 | - | – | |
| TMHMM | 288 | 307 | 20 | - | – | |
| Phobius | 288 | 307 | 20 | - | – | |
| Pfam | 295 | 458 | 164 | 2.9E-37 | ||
| Phobius | 308 | 326 | 19 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 327 | 348 | 22 | - | – | |
| Phobius | 349 | 368 | 20 | - | – | |
| TMHMM | 366 | 388 | 23 | - | – | |
| Phobius | 369 | 389 | 21 | - | – | |
| Phobius | 390 | 400 | 11 | - | – | |
| Phobius | 401 | 420 | 20 | - | – | |
| TMHMM | 403 | 422 | 20 | - | – | |
| Phobius | 421 | 440 | 20 | - | – | |
| Phobius | 441 | 463 | 23 | - | – | |
| TMHMM | 443 | 465 | 23 | - | – | |
| Phobius | 464 | 468 | 5 | - | – | |
| Phobius | 469 | 490 | 22 | - | – | |
| TMHMM | 470 | 492 | 23 | - | – | |
| Phobius | 491 | 530 | 40 | - | – | |
| MobiDBLite | 500 | 530 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0431500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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