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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0433600 |
| Transcript ID | LotjaGi2g1v0433600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 domain-containing family protein; TAIR: AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|G7KC44|G7KC44_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi2g1v0433600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93035370..93038427) extracted from Lotus japonicus Gifu genome v1.2.
CTCACTAAAATCTTCTTTGGCAACAGAAGCCTGACAGCCACATTTAATCATGATCAACTTAAAGTTAGGGGTAGATGTGG TGAGTGCTCACAATCTACTACCTAAAGATGGACAAGGTTCTTCTAGTGCCTTTGTGGAACTTTACTTTGATGGCCAGAAG TTCCGTACCACCATCAAAGAAAGGGATCTTAACCCTGTTTGGAATGAGAGCTTCTACTTCAACATATCTGATCCTTCAAA TCTTCACTACCTCACTCTTGAGGCCTATGTCCACTGCCATTCCAGAGCAACTAACTCAAGTTCATTTCTAGGCAAGGTTA GCCTCACAGGAACATCCTTTGTCCCTCACTCTGATGCAGTTGTCCTGCACTTTCCATTGGAAAAGCGCGGCATCTTCTCT CGTGTAAGAGGAGAGATTGGCCTTAAAGTTTACATCACTGATAATCCAACCATAAAATCCTCAATTCCAACTCCTACTGA TAATCCCAGCTCAACTAATGCAGATGTTCATGCACCAGCAAATTTATCTAATGAAAGAGCTGACTCAAGACGACACACGT TTAATCATCTCCCCAACACAAACCATCAACAACACGAACACCGACACCAACACCATCCCCCTCCTACCTTTGCAGATACT CACTATGTCACAAAGTATGAAGCTGATGAAATGAAATCTGATCAACCACAGCCTATGAAGCTAGTACGCATGCACTCTGC TGCTTCAGCACAGCCAGTTGATTATGCACTCAAAGAAACAAGCCCGTTTCTTGGAGGGGGAAGAGTTGTGGGGGGCCGAG TTATTCATAAAGACAAAACTTCGAGCACATATGATCTCGTGGAAAGGATGTATTTTCTGTATGTGAGGGTTGTTAAGGCT CGCGAGCTTCCTGCTATGGATCTTACCGGGAGTCTTGATCCATTTGTTGAGGTGAGAATAGGCAACTACAGAGGTATCAC AAGACACTTTGATAAGAATCAGCATCCTGAGTGGAATCAAGTGTTTGCATTTTCAAAAGAGCGGATGCAAGCATCTGTAC TAGAAGTTGTGATCAAGGACAAGGATCTCATCAAAGATGATTTTGTAGGCATTGTGAGGTTTGACATCAATGAGGTTCCT CTGAGAGTGCCACCGGATAGTCCTTTGGCGCCAGAGTGGTACCGCCTCATTGATAAAAAGGGGGAGAAGGTTAAAGGTGA GCTGATGCTAGCTGTGTGGCTTGGAACTCAAGCAGATGAGGCATTTTCTGATGCTTGGCATTCAGATGCAGCCACACCTG TTGACAGCTCCCCTGCTACCTCCACAGCGATCCGATCAAAGGTCTACCACGCGCCAAGGTTGTGGTACGTGCGTGTCAAT GTTGTGGAGGCGCAGGACCTGGTTCCAACAGAGAAAAACCGTTTCCCTGATGTGTATGTGAAGGTGCAGATAGGAAACCA AGTGCTGAAAACAAAGACAGTTCCAGCCAGAACTCTAAGCGCGCAGTGGAATGAGGATCTTTTGTTTGTTGCTGCTGAAC CTTTTGATGATCATTTAGTCCTTACAGTCGAAGACCGGGTTGGTCCTGGAAAAGATGAGATCACAGGGAGGGTGATCATT CCACTGAACGCTGTGGAGAGGCGTGCTGATGACAGAATCATTCACTCGCGGTGGTTCAACCTGGAAAAGCCAGTTGCAGT GGATGTTGATCAGTTGAAGAAAGAAAAATTCTCCAGCAGAATTCAGCTCCGGCTATGCCTAGACGGAGGATATCATGTTC TTGATGAGTCTACTCATTACAGCAGCGATCTTCGCCCCACAGCAAAACAGTTATGGAAGCCGCCAATCGGGGTTTTAGAA CTTGGAGTGCTGAATGCCATAGGACTCCACCCCATGAAAACAAGGGATAGCAGAGGAACTTCTGACACTTACTGTGTAGC AAAATATGGTCACAAATGGGTGAGAACAAGGACCATTGTTGATAATTTGAATCCAAAATACAATGAGCAATACACTTGGG AGGTGTTTGATCAATCCACAGTCCTCACTATAGGTGTATTTGACAACTCCCAGATTAGTGAAAAGGGTACTTCAAAAGAC TTGAAAATTGGGAAGGTCAGAATACGAATCTCAACTCTTGAAACAGGTAGAATTTACACGCACTCATATCCACTACTTGT TCTTCATCCAACCGGGGTTAAGAAGATGGGTGAACTGCACTTAGCAATAAGATTCTCATGCACTTCATTTGCCAACATGC TTTACCAGTACTCACGACCACTGCTTCCCAAAATGCACTATGTGAGACCGTTCTCAGTGACGCAGCTTGACATGCTGCGT CACCAAGCGGTCAACATAGTGGCGGCCAGGCTTGGCCGAGCAGAGCCGCCACTTAGGAAGGAGGTGGTGGAGTACATGTC TGACGTGGACTCTCACCTCTGGAGCATGCGTCGGAGCAAGGCGAATTTCTTTAGGCTGATGACAGTTTTCTCTGGTGTGT TTGCGGTTATGAGGTGGTTGGGAGATATCTGCATGTGGATAAATCCTGTCACCACAGTGCTTGTTCATCTTCTGTTCCTG ATGCTAGTTTGCTTCCCGGAACTGATTCTTCCTACACTTTTTCTCTACCTGTTCTTGATTGGTGTGTGGAACTTCAGGTA CCGGCCGAGATACCCTCCTCACATGAACACTAGAATCTCACAGGCAGAAGCAGTGCACCCGGATGAGCTTGATGAGGAGT TTGATACTTTTCCGACGAGCCGGAACCCTGACCTTGTGAGAATGAGGTATGACCGGTTGAGGAGCGTAGCTGGGAGGATA CAAACGGTGGTTGGGGATTTGGCAAGTCAGGGGGAGAGGATTCAGGCAATGTTGAGCTGGAGAGACCCTCGTGCTTCGGC TATCTTCATTACCTTCTGTCTCCTATCTGCTTTGGTGCTTTATGTTACTCCTTTTCAAGTAGTGGCGGGTTTAGCTGGGT TCTACGCCATGAGGCATCCAAGATTTCGCTACCGGCTCCCTTCTGCACCCATCAACTTCTACCGTCGCCTGCCTGCAAGA ACTGACAGCATGTTATAG
CDS sequence (LotjaGi2g1v0433600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCAACTTAAAGTTAGGGGTAGATGTGGTGAGTGCTCACAATCTACTACCTAAAGATGGACAAGGTTCTTCTAGTGC CTTTGTGGAACTTTACTTTGATGGCCAGAAGTTCCGTACCACCATCAAAGAAAGGGATCTTAACCCTGTTTGGAATGAGA GCTTCTACTTCAACATATCTGATCCTTCAAATCTTCACTACCTCACTCTTGAGGCCTATGTCCACTGCCATTCCAGAGCA ACTAACTCAAGTTCATTTCTAGGCAAGGTTAGCCTCACAGGAACATCCTTTGTCCCTCACTCTGATGCAGTTGTCCTGCA CTTTCCATTGGAAAAGCGCGGCATCTTCTCTCGTGTAAGAGGAGAGATTGGCCTTAAAGTTTACATCACTGATAATCCAA CCATAAAATCCTCAATTCCAACTCCTACTGATAATCCCAGCTCAACTAATGCAGATGTTCATGCACCAGCAAATTTATCT AATGAAAGAGCTGACTCAAGACGACACACGTTTAATCATCTCCCCAACACAAACCATCAACAACACGAACACCGACACCA ACACCATCCCCCTCCTACCTTTGCAGATACTCACTATGTCACAAAGTATGAAGCTGATGAAATGAAATCTGATCAACCAC AGCCTATGAAGCTAGTACGCATGCACTCTGCTGCTTCAGCACAGCCAGTTGATTATGCACTCAAAGAAACAAGCCCGTTT CTTGGAGGGGGAAGAGTTGTGGGGGGCCGAGTTATTCATAAAGACAAAACTTCGAGCACATATGATCTCGTGGAAAGGAT GTATTTTCTGTATGTGAGGGTTGTTAAGGCTCGCGAGCTTCCTGCTATGGATCTTACCGGGAGTCTTGATCCATTTGTTG AGGTGAGAATAGGCAACTACAGAGGTATCACAAGACACTTTGATAAGAATCAGCATCCTGAGTGGAATCAAGTGTTTGCA TTTTCAAAAGAGCGGATGCAAGCATCTGTACTAGAAGTTGTGATCAAGGACAAGGATCTCATCAAAGATGATTTTGTAGG CATTGTGAGGTTTGACATCAATGAGGTTCCTCTGAGAGTGCCACCGGATAGTCCTTTGGCGCCAGAGTGGTACCGCCTCA TTGATAAAAAGGGGGAGAAGGTTAAAGGTGAGCTGATGCTAGCTGTGTGGCTTGGAACTCAAGCAGATGAGGCATTTTCT GATGCTTGGCATTCAGATGCAGCCACACCTGTTGACAGCTCCCCTGCTACCTCCACAGCGATCCGATCAAAGGTCTACCA CGCGCCAAGGTTGTGGTACGTGCGTGTCAATGTTGTGGAGGCGCAGGACCTGGTTCCAACAGAGAAAAACCGTTTCCCTG ATGTGTATGTGAAGGTGCAGATAGGAAACCAAGTGCTGAAAACAAAGACAGTTCCAGCCAGAACTCTAAGCGCGCAGTGG AATGAGGATCTTTTGTTTGTTGCTGCTGAACCTTTTGATGATCATTTAGTCCTTACAGTCGAAGACCGGGTTGGTCCTGG AAAAGATGAGATCACAGGGAGGGTGATCATTCCACTGAACGCTGTGGAGAGGCGTGCTGATGACAGAATCATTCACTCGC GGTGGTTCAACCTGGAAAAGCCAGTTGCAGTGGATGTTGATCAGTTGAAGAAAGAAAAATTCTCCAGCAGAATTCAGCTC CGGCTATGCCTAGACGGAGGATATCATGTTCTTGATGAGTCTACTCATTACAGCAGCGATCTTCGCCCCACAGCAAAACA GTTATGGAAGCCGCCAATCGGGGTTTTAGAACTTGGAGTGCTGAATGCCATAGGACTCCACCCCATGAAAACAAGGGATA GCAGAGGAACTTCTGACACTTACTGTGTAGCAAAATATGGTCACAAATGGGTGAGAACAAGGACCATTGTTGATAATTTG AATCCAAAATACAATGAGCAATACACTTGGGAGGTGTTTGATCAATCCACAGTCCTCACTATAGGTGTATTTGACAACTC CCAGATTAGTGAAAAGGGTACTTCAAAAGACTTGAAAATTGGGAAGGTCAGAATACGAATCTCAACTCTTGAAACAGGTA GAATTTACACGCACTCATATCCACTACTTGTTCTTCATCCAACCGGGGTTAAGAAGATGGGTGAACTGCACTTAGCAATA AGATTCTCATGCACTTCATTTGCCAACATGCTTTACCAGTACTCACGACCACTGCTTCCCAAAATGCACTATGTGAGACC GTTCTCAGTGACGCAGCTTGACATGCTGCGTCACCAAGCGGTCAACATAGTGGCGGCCAGGCTTGGCCGAGCAGAGCCGC CACTTAGGAAGGAGGTGGTGGAGTACATGTCTGACGTGGACTCTCACCTCTGGAGCATGCGTCGGAGCAAGGCGAATTTC TTTAGGCTGATGACAGTTTTCTCTGGTGTGTTTGCGGTTATGAGGTGGTTGGGAGATATCTGCATGTGGATAAATCCTGT CACCACAGTGCTTGTTCATCTTCTGTTCCTGATGCTAGTTTGCTTCCCGGAACTGATTCTTCCTACACTTTTTCTCTACC TGTTCTTGATTGGTGTGTGGAACTTCAGGTACCGGCCGAGATACCCTCCTCACATGAACACTAGAATCTCACAGGCAGAA GCAGTGCACCCGGATGAGCTTGATGAGGAGTTTGATACTTTTCCGACGAGCCGGAACCCTGACCTTGTGAGAATGAGGTA TGACCGGTTGAGGAGCGTAGCTGGGAGGATACAAACGGTGGTTGGGGATTTGGCAAGTCAGGGGGAGAGGATTCAGGCAA TGTTGAGCTGGAGAGACCCTCGTGCTTCGGCTATCTTCATTACCTTCTGTCTCCTATCTGCTTTGGTGCTTTATGTTACT CCTTTTCAAGTAGTGGCGGGTTTAGCTGGGTTCTACGCCATGAGGCATCCAAGATTTCGCTACCGGCTCCCTTCTGCACC CATCAACTTCTACCGTCGCCTGCCTGCAAGAACTGACAGCATGTTATAG
Protein sequence (LotjaGi2g1v0433600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MINLKLGVDVVSAHNLLPKDGQGSSSAFVELYFDGQKFRTTIKERDLNPVWNESFYFNISDPSNLHYLTLEAYVHCHSRA TNSSSFLGKVSLTGTSFVPHSDAVVLHFPLEKRGIFSRVRGEIGLKVYITDNPTIKSSIPTPTDNPSSTNADVHAPANLS NERADSRRHTFNHLPNTNHQQHEHRHQHHPPPTFADTHYVTKYEADEMKSDQPQPMKLVRMHSAASAQPVDYALKETSPF LGGGRVVGGRVIHKDKTSSTYDLVERMYFLYVRVVKARELPAMDLTGSLDPFVEVRIGNYRGITRHFDKNQHPEWNQVFA FSKERMQASVLEVVIKDKDLIKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLIDKKGEKVKGELMLAVWLGTQADEAFS DAWHSDAATPVDSSPATSTAIRSKVYHAPRLWYVRVNVVEAQDLVPTEKNRFPDVYVKVQIGNQVLKTKTVPARTLSAQW NEDLLFVAAEPFDDHLVLTVEDRVGPGKDEITGRVIIPLNAVERRADDRIIHSRWFNLEKPVAVDVDQLKKEKFSSRIQL RLCLDGGYHVLDESTHYSSDLRPTAKQLWKPPIGVLELGVLNAIGLHPMKTRDSRGTSDTYCVAKYGHKWVRTRTIVDNL NPKYNEQYTWEVFDQSTVLTIGVFDNSQISEKGTSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAI RFSCTSFANMLYQYSRPLLPKMHYVRPFSVTQLDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANF FRLMTVFSGVFAVMRWLGDICMWINPVTTVLVHLLFLMLVCFPELILPTLFLYLFLIGVWNFRYRPRYPPHMNTRISQAE AVHPDELDEEFDTFPTSRNPDLVRMRYDRLRSVAGRIQTVVGDLASQGERIQAMLSWRDPRASAIFITFCLLSALVLYVT PFQVVAGLAGFYAMRHPRFRYRLPSAPINFYRRLPARTDSML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 91 | 91 | 14.349 | ||
| Phobius | 1 | 799 | 799 | - | – | |
| PANTHER | 2 | 1002 | 1001 | 0.0 | – | |
| PANTHER | 2 | 1002 | 1001 | 0.0 | – | |
| Gene3D | 4 | 151 | 148 | 7.1E-24 | ||
| SMART | 5 | 106 | 102 | 8.5E-13 | ||
| Pfam | 5 | 94 | 90 | 8.1E-17 | ||
| SUPERFAMILY | 5 | 145 | 141 | 3.41E-25 | – | |
| CDD | 5 | 131 | 127 | 4.79523E-69 | – | |
| MobiDBLite | 134 | 191 | 58 | - | – | |
| MobiDBLite | 134 | 156 | 23 | - | – | |
| Gene3D | 265 | 410 | 146 | 9.8E-26 | ||
| SUPERFAMILY | 268 | 407 | 140 | 5.41E-32 | – | |
| SMART | 269 | 365 | 97 | 1.0E-14 | ||
| CDD | 269 | 393 | 125 | 2.30075E-62 | – | |
| ProSiteProfiles | 270 | 350 | 81 | 14.201 | ||
| Pfam | 270 | 363 | 94 | 3.9E-18 | ||
| Gene3D | 415 | 563 | 149 | 1.4E-23 | ||
| Pfam | 432 | 537 | 106 | 3.4E-18 | ||
| SUPERFAMILY | 432 | 585 | 154 | 1.35E-30 | – | |
| SMART | 433 | 531 | 99 | 3.8E-12 | ||
| CDD | 433 | 583 | 151 | 1.36024E-83 | – | |
| ProSiteProfiles | 434 | 516 | 83 | 11.655 | ||
| Gene3D | 578 | 724 | 147 | 4.1E-26 | ||
| Pfam | 594 | 702 | 109 | 1.1E-22 | ||
| SUPERFAMILY | 594 | 738 | 145 | 7.5E-27 | – | |
| SMART | 595 | 699 | 105 | 4.3E-14 | ||
| CDD | 595 | 719 | 125 | 9.35038E-61 | – | |
| ProSiteProfiles | 596 | 684 | 89 | 9.998 | ||
| TMHMM | 800 | 817 | 18 | - | – | |
| Phobius | 800 | 818 | 19 | - | – | |
| Phobius | 819 | 829 | 11 | - | – | |
| Phobius | 830 | 860 | 31 | - | – | |
| TMHMM | 830 | 852 | 23 | - | – | |
| Pfam | 847 | 1002 | 156 | 1.6E-77 | ||
| Phobius | 861 | 943 | 83 | - | – | |
| TMHMM | 944 | 973 | 30 | - | – | |
| Phobius | 944 | 973 | 30 | - | – | |
| Phobius | 974 | 1002 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0433600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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