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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0435600 |
| Transcript ID | LotjaGi2g1v0435600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TAIR: AT4G23490.1 fringe-like protein (DUF604); Swiss-Prot: sp|Q6Y288|B3GLT_HUMAN Beta-1,3-glucosyltransferase; TrEMBL-Plants: tr|G7KC11|G7KC11_MEDTR Transferring glycosyl group transferase; Found in the gene: LotjaGi2g1v0435600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93224469..93228646) extracted from Lotus japonicus Gifu genome v1.2.
CTCAACACATTTTTATAAATATTGAAATTTGAGGATACTATAGTGTGCTAGCTAGCTGCAACCTGTCACCTCTGCATGCT CTCTCAACTTTACCCTCACCTCTCTTCCTTCTTCTCCTCGTTCTCATCGATTTCACTCTCTCATTCTTCATTCATTCTTC TCAATTTCAAATTTCTCTGTAACTAACTGCATTTGTTTGTTACAACAGAAACTCATTCAGTTAGCTAGATTGGAAAATAA AACAACAACAACAAAAAAAATTTAGAAAATGAAAGAAACAGAGAAATTAATTTGGGAACAGAGAAACAGCAACACTACCA CAACACAGTCACGTTCTTCACACTCACCCAAGCTAATGCTATGGCTTATCCTCTTCGTTTCTCTCCTGTACTTCCTCTAC ACTTACAACCTCCTTTCCACTTCAAGCGCGTGCACCCACGCGCCACTCTCCGTCCACCGTGTCTCTTCCACTTCCACCCT TCTTCACAATGCCACTGCCAATAATGCTTCCTCAAACCTCCGCCACCATCGGAAAACGGAGCTCCGCCACGTGGTGTTCG GAATCGCCGCGTCGGCGAAGCTCTGGGAGCAGAGGAAGAACTACATTAAGCTCTGGTACAAGGCAAAAGAGATGAGAGGA GTGGTGTGGCTGGACGACGTAGTGAAAACAGATCCGGCGGAAGGTTTGCCGCTGGTGAGAATCTCCACCGACACATCCAA CTTCCCGTACACGAACAAGCAAGGTCACCGCTCGGCGATTCGAATCTCGAGAATCGTGTCTGAAACGCTGCGTTTAGGGA TGAAGGATGTGCGGTGGTTTGTCATGGGCGACGACGACACCGTTTTCGTCGCCGAGAATCTGCTCCGGATTCTCAACAAG TACGACCATAATCAATTCTATTACATTGGGAGCTTATCGGAGAGTCATTTGCAGAACATTTTCTTCTCGTATGGAATGGC CTACGGCGGAGGAGGGTTTGCTATCAGCTACCCTTTGGCGAAAGCTCTGCTGAAAATGCAGGACCGTTGCATTCATAGGT ACCCGGGTCTCTATGGTTCTGATGATAGAATGCAAGCTTGTATGGCTGAACTCGGTGTTCCACTCACCAAGGAAATCGGT TTTCACCAGGTTTGTTACTCTCTATCTCTTTATCAATTTTCAATTTAATTATCATCACTCTATTATTTCTGTGTCTTATG TGCTATTTACTGTGTGATATATATATATGATGAATTGTGTTATGTGTAATTGGTATGAGCTTCTATTATCTTGATTCAGC TAATGGGGGAGTGGGACAATGTTATGTTTTTTGTTCTGAGTGAGTGGAAGAAGAAGGATTGCCCAGTTTTGGGTTGTGAC AGATTCAGTGGTGAAAGCTAGCTAGGCCTAGAACTTTCCATATTACTGTGGTTGGTAACTTGTAACTACCACCTTTCCTG TGTTTTGTTTTTGTCTACCTAAAATGATTGAAGCCATGAAAGGTGTCGGTGACTTCTGCTGTGCATTGATTCAACTCTGT TTCTGTTTAGTAATCTTTTCATACTTAATGACCATCTTAATTCCTGAAGCTGTTTAATTTAATGCTTTTAACTATCATAA AGGTCAGCACTTAATTTAATTAAGATAAATATATAATAGTCAATTGTAGTAAATTAAGTTCAAGTACTACTATATATGCA ACTGAAAAATAAAATATGGAAAATTTCATTGTTTAGGGTGCTTGTGGTATTATATTAAAATGAATTGAGAGAATCAATTT TGTTAATGTAATTTGTATTTTATTTTTTGACCTGTTTGGTGCATTCTTACCCCACACACCAATAAATAGATAAAGCTATT ATATTGGCCATCAAGTTTAAAGGCATTGCATGACCCTAGATTTATGGCTGGTCCCACGTTCTACCATGCCCTGGCTACAC TGCAATTACAACAGAGACCAAACAGAGTGTACAAATTAAGAGACTGGAAGAACAAATATAAGTTTAGAAATTATAAAGAA CTTGAAAGCATGTTTAGATTGTCTTATATGCATGTATGATGTATGCATTGTGCTTTAATTACCAACCTATTAAAACTGGT TAGTAAATTTGTTGTTACTTGTTACTGAAGTGGATTGGTTAGATAATGATAAATGATCCTTTTGTTTCTAACTGCAAATC TCTTTAGTCTTTACAAACAAAATACATCTTTTTAGGGAGAGTGGGTGGTGGACAGCCATAAGTGTCTTCTTTTTAAATTG ACAATTGACATAGTTTCTAAAATTTGACTTATGTCAACATTCAGATTGCAACATCTCCACTTTGGAGTGGAATTTTAGGT ATTTGGGCATTTTGGCATTAAACAATTCAGGTTTTAAGTAGTTGCCATGTCCAAATTGAGCTGGCAGGACAAGCAATGAT GAGTATTTTTGTTGTCTTTTCCCCTAATTAGGCATTTTATCTTTTGTAACTGTGCTTGGTCGTTCTGGATTGTTAGCGTG TTTGGATTGGTTTTGCTTTTCTAGAATCAATTCTGAAACCACTACTCACATAAGTTTATTCCCAGAATTGGTTCTGACTT TAGGATCAATTGTAAAAGGTTTTCCAAACATGCATTGTCTTCTAAAGGAGAACCATGATATTTTATCTTAAATTGTGAGT AAATCATGATAGTAATGGTATTTTATATTGCTTGATCAATCAATGAGATTGGATGTATCCCTCCATGCTATTCTGCAAGC AATTCCACTGACAGCCCTTGGTTTATTGAAACAGTATGATGTGTATGGGAACCTGTTGGGCCTTCTTACATCTCATCCTG TGACTCCATTGGTTTCACTTCACCATCTTGATGTGGTTGAGCCGATCTTCCCCAATGTCACTAGAGTAGAAGCACTTCAA CGGCTTACCATACCAATGAGGCTCGACTCTGCAGGGCTCATTCAGCAATCCATCTGCTATGACAAAAAAAATAGCTGGAC AGTTTCAGTTTCATGGGGTTATGCTGTTCAGATATTTCGAGGCATATTTTCGCCCCGGGAGATAGAAATGCCTTCAAGAA CATTCCTGAATTGGTATAGAAGAGCAGATTACACTGCATACGCATTCAACACACGCCCGGTTACCCGAAACCCATGTCAG AAGCCTTTTGTGTTTTACATGTCAAAGGCAAAACTCAATTCTACAATGCAGCAGACAGTGAGTGAATATGAAAGGCATCG CGTCCCTCATCCGGAATGTCGGTGGAAGATGGCTGATCCTTCTGCTCTTGACAAAGTTGTTGTATATAAGAAGCCAGACC CACATCTATGGGATAGAGTAAGTGCTTTTCACATCAATTTTCCTTACTATATAATGTGAGCCTACCACATATGCAAATGT CATTAATTAGTGATGACATATCATTAGCAAGTCTAACTAATGCCAGTGCTAAATTCTAGCCTGTTTTGAGTGTTTTTATG CTTCAAATCTTAATTTGCAAAAGCAAAACCTGATTGTGGTATCATTTGTTGAGAAATTAATGTTTGACATTAAAACTGAT TTGAACTAATTTGACATAGTTATAAGTTACTTGTTTTAGAGCAAAAGTTAGTTACCCAAAACTCTGCATATAATAAGCAT TGTATGAATGAGAAATGGTTACTCTTTTTTTTCACATATCATAATAGTTAATGTGGTTTGTTTTGGGTGTTTTGTTGATA TATTTGGCAGGCTCCAAGGAGAAACTGTTGCAGAGTAATGAAGCCAAACAAGAAAGGAACCATGGTGATAGATGTGGGTA TATGTAGAGATGGTGAGGTAAGCGAAGCTTAGCTGTGGAATGTGGCTGACTAATATTAAGTTCTTGTCTATTTTCTGTGA GCTTATTTAATTTCTTCATTTATTGGGTCTCAAAGTGAGATTTTGTCATTTTTCCTGGCTCACTCATGTGGGTTGGGGTG TGAAAAGGTGTTTGTAATTTTTTATTCTTGTAATTATTTTAGATTACAAATGTAAAATTTGTAGTTTAATATAATGAAAT AAAGTGAATTTTCATTTTGTAGTTTACTTTTCCTTGCGGGAGATAATCTTTAAAATTCAGTGCATGCACTAGAATAAGAA TAAATCAGATGGGTGCTTAGCAGAGAACCTAGCTACCACTCATTCTCGTCAGAACAGAAACTAGAAATTACTGATCTTAT CGAGTTGCTATTCCTAAT
CDS sequence (LotjaGi2g1v0435600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGAAACAGAGAAATTAATTTGGGAACAGAGAAACAGCAACACTACCACAACACAGTCACGTTCTTCACACTCACC CAAGCTAATGCTATGGCTTATCCTCTTCGTTTCTCTCCTGTACTTCCTCTACACTTACAACCTCCTTTCCACTTCAAGCG CGTGCACCCACGCGCCACTCTCCGTCCACCGTGTCTCTTCCACTTCCACCCTTCTTCACAATGCCACTGCCAATAATGCT TCCTCAAACCTCCGCCACCATCGGAAAACGGAGCTCCGCCACGTGGTGTTCGGAATCGCCGCGTCGGCGAAGCTCTGGGA GCAGAGGAAGAACTACATTAAGCTCTGGTACAAGGCAAAAGAGATGAGAGGAGTGGTGTGGCTGGACGACGTAGTGAAAA CAGATCCGGCGGAAGGTTTGCCGCTGGTGAGAATCTCCACCGACACATCCAACTTCCCGTACACGAACAAGCAAGGTCAC CGCTCGGCGATTCGAATCTCGAGAATCGTGTCTGAAACGCTGCGTTTAGGGATGAAGGATGTGCGGTGGTTTGTCATGGG CGACGACGACACCGTTTTCGTCGCCGAGAATCTGCTCCGGATTCTCAACAAGTACGACCATAATCAATTCTATTACATTG GGAGCTTATCGGAGAGTCATTTGCAGAACATTTTCTTCTCGTATGGAATGGCCTACGGCGGAGGAGGGTTTGCTATCAGC TACCCTTTGGCGAAAGCTCTGCTGAAAATGCAGGACCGTTGCATTCATAGGTACCCGGGTCTCTATGGTTCTGATGATAG AATGCAAGCTTGTATGGCTGAACTCGGTGTTCCACTCACCAAGGAAATCGGTTTTCACCAGTATGATGTGTATGGGAACC TGTTGGGCCTTCTTACATCTCATCCTGTGACTCCATTGGTTTCACTTCACCATCTTGATGTGGTTGAGCCGATCTTCCCC AATGTCACTAGAGTAGAAGCACTTCAACGGCTTACCATACCAATGAGGCTCGACTCTGCAGGGCTCATTCAGCAATCCAT CTGCTATGACAAAAAAAATAGCTGGACAGTTTCAGTTTCATGGGGTTATGCTGTTCAGATATTTCGAGGCATATTTTCGC CCCGGGAGATAGAAATGCCTTCAAGAACATTCCTGAATTGGTATAGAAGAGCAGATTACACTGCATACGCATTCAACACA CGCCCGGTTACCCGAAACCCATGTCAGAAGCCTTTTGTGTTTTACATGTCAAAGGCAAAACTCAATTCTACAATGCAGCA GACAGTGAGTGAATATGAAAGGCATCGCGTCCCTCATCCGGAATGTCGGTGGAAGATGGCTGATCCTTCTGCTCTTGACA AAGTTGTTGTATATAAGAAGCCAGACCCACATCTATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTAATGAAGCCA AACAAGAAAGGAACCATGGTGATAGATGTGGGTATATGTAGAGATGGTGAGGTAAGCGAAGCTTAG
Protein sequence (LotjaGi2g1v0435600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKETEKLIWEQRNSNTTTTQSRSSHSPKLMLWLILFVSLLYFLYTYNLLSTSSACTHAPLSVHRVSSTSTLLHNATANNA SSNLRHHRKTELRHVVFGIAASAKLWEQRKNYIKLWYKAKEMRGVVWLDDVVKTDPAEGLPLVRISTDTSNFPYTNKQGH RSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVAENLLRILNKYDHNQFYYIGSLSESHLQNIFFSYGMAYGGGGFAIS YPLAKALLKMQDRCIHRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLLGLLTSHPVTPLVSLHHLDVVEPIFP NVTRVEALQRLTIPMRLDSAGLIQQSICYDKKNSWTVSVSWGYAVQIFRGIFSPREIEMPSRTFLNWYRRADYTAYAFNT RPVTRNPCQKPFVFYMSKAKLNSTMQQTVSEYERHRVPHPECRWKMADPSALDKVVVYKKPDPHLWDRAPRRNCCRVMKP NKKGTMVIDVGICRDGEVSEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 14 | 500 | 487 | 7.6E-302 | – | |
| PANTHER | 14 | 500 | 487 | 7.6E-302 | – | |
| Phobius | 29 | 49 | 21 | - | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 50 | 501 | 452 | - | – | |
| Gene3D | 82 | 327 | 246 | 3.4E-10 | – | |
| Pfam | 222 | 475 | 254 | 5.7E-117 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0435600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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