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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0437600 |
| Transcript ID | LotjaGi2g1v0437600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT5G41610.1 cation/H+ exchanger 18; Swiss-Prot: sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18; TrEMBL-Plants: tr|A0A151R5E7|A0A151R5E7_CAJCA K(+)/H(+) antiporter 13; Found in the gene: LotjaGi2g1v0437600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93419822..93423893) extracted from Lotus japonicus Gifu genome v1.2.
GCATATTCCTTGAGCACTATTTGATTCTCTATCGGTACTTCATTACAGTTCTTACATTGAAAAAGATATATTACATATTT TAGAGATTGATCTAATAATCTTTTCCTTTCCAAGTGATATGTTCCCAACTCTTATTACTCTGCATTAAAATATAGGGGAA ATTTCCACATGAAAAATCCAAATTCGAGTTTTAACACCGATCTATATTGTTCTATTTTGGTGCTTCGTGAAGGGTGCATG CATTGAGGAGCGTGAACAATGGAAGGGAGTCAGCGACTCAGAGTCAAGGTGGCGGTCGTTAGAGGAAGTGATCTCAAGTG GGGTTTGGCCATGTTAGGTGAGCTGATATAAATTCTCCTGGAAATGTCCACATCAATGAAACTGAAAAGGAAACAAATTA CACTCATCACTTGTGGCGGTTAACTTCTCTTTTGTCATTTTCAGCGCTTCCTTTCGCTTTCAATCTCTCTTCTCCACTCC AATCCTGTCCTACAAATTTGTAGAAACTCACGACTTGTTGGATAACTCATCATCTGATTCCGATTCAGATTCAGATTCTT CTTCTTCTTCTTCTTTCACCGACCGACCTTAACAAATGGCTTCCAATGGTTGCTCGCCGCCAATGAAAGCCGCATCAAAT GGTGCATTTCAGGGAGATAACCCTCTTGACTATGCGGTTCCCCTCGCTATTTTACAGATATGCCTTGTTCTTGTTGTCAC AAGGGGCCTCGCATACCTTCTTAGACCTTTAAGGCAGCCACGAGTTATTGCAGAGATTATTGTAAGTCTTTTTTTCTTCA AATATTCCCCAATCTTATTAAGTTATAGCTTTTCACAGAATTTCAATCTTCACTCTACACTGTGTTTTACTTGACCCAAA TGAGTGTAATATAATAATTTAGTGAAATTTAAGATGTATGCGGGGTGTGACTTTAAACAATTATATATACATGCCAAAGT AGGTAGGTACTTATATGTAAGAAATTATAGTTGGATTGTTTGCACAGCCAGCTACACTGAGACTCTAAGAGGAATCGAAG CACACTTTATTGGAGAGTTTGGGAGATTTGGAAATATATCTTAGATGCAATAAGGAAATTTTGTAATTAAGATTATATTA TCAAATTACGAATATCGGGTATATATTTCTGGCCACAAAGATTTTTGTAATTTCTGTTGGATTGTGATCTTGCTCTTGCA TATGGAAAAGGAAGGTGTATTACAGTTTATATTTCAGTTTCGAAGGGAGGGAAAAATTACAAAATTACTGCTGTGTGATT TTAAAGATTGCTTATTGACAGGGAGGAATAATACTTGGGCCATCAGTGCTTGGACGAAGTACAAGCTATCTGCATGCAGT TTTCCCACCCAAGAGTCTTACAGTATTAGATACTCTGGCAAACCTAGGCATTATATTCTTTCTATTCCTAGCAGGCTTGG AGTTAGATCCAAAATCTCTGCGCAAAACAGGATATAAAGTCCTTGGCATTGCTTTGGCCGGAATAAGCTTGCCCTTTGCA CTTGGAATTGGTTCATCATTTGTTCTGCTAAAAACAATAGCCAAAGGTGTAAATAGTACTGCATTTCTTGTATATATGGG TGTTGCTCTGTCCATAACCGCATTTCCTGTGTTAGCCCGCATTTTGGCTGAGTTGAAACTTCTAACCACTGATGTTGGTA GAATGGCTATGTCAGCTGCAGCAGTTAATGATATAGCTGCCTGGATTTTGCTCGCACTGGCTGTTGCCTTATCAGGAAGT AGCCAATCTCCACTTGTGTCATTGTGGGTCTTCTTAAGTGGTTGTGGTTTTGTTGTTTGTTCAATCTTCATTGTCCTTCC AATTTTCAAATGGATGGCCCAACGATGCCATGAAGGTGAGCCTGTTGACGAGGTATACATATGTGCTACATTAGGTGCGG TTCTGGCTGCTGGGTTTGTTACAGATGCTATTGGAATCCATTCAATGTTTGGCGCATTTGTTCTTGGAATTTTGGTCCCA AAAGAAGGACCATTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTATTGCTCCCACTCTATTTTGT GTCAAGTGGACTGAAAACTGATATAGCCACCATTCGCGGGCTGCAATCTTGGGGTCTTCTGGTTTTTGTTATATTTACAG CTTGTTTTGGGAAGATTGTTGGGACTGTTGGGGTATCTCTTTTGTGTAAAGTACCTTTTAATGAGGCTTTAGTGCTTGGA TTCTTGATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTATTTGAATTTCCCTT CTCTCACCGTTGTAATTTGAACTTGTTTGGATGCAAACAAAAGAGCAATTATTGGAGCTTATCTAGTGTTTTTTTTAGTA AATAAGCTTCAATAAGCCCATATCCAATGAGACTCTCAGTTTAACATTTTGCTTGTTCCTCCCTATCATACTGATGGAAA TTTAATGTATGCATTTGCAGGTTTTGAATGATCAAACCTTTGCTATTATGGTTCTGATGGCTCTCTTTACTACCTTTATG ACCACTCCTCTTGTGATCGCTGTGTATAAGCCCGCAAGGAAGGCAAGAATAGCTGATTACAAATACAGAACAGTTGAAAG GAAAAACACAAATAGCCAGCTGAGAATTCTTGTTTGCTTCCACGGTGCGAGAAATATTCCGTCAGTGATAAATCTGATTG AGGCTTCAAGAGGAACCCAGAAGCATGATGCACTTTCTGTATATGCAATGCACCTTAAAGAACTTTCAGAGAGGTCCTCA TCGATACTAATGGTACACAAGGCAAGAAGAAACGGGTTGCCCTTCTGGAATAAAGCTCGTCATGCAGGTTCTGACCATGT CATTGTGGCATTTGAGGCTTACCAGAAGCTGAGCCAGGTGTCTGTCCGGCCAATGATAGCAATCTCATCCGTAGCTAGCA TTCATGAAGACATTTGTGGAACTGCTGAGAGAAAGAGAGCCGCAGTCATTATCATCCCATTTCACAAGCATCAAGGATTG GACGGTTCACTAGATATCACACGAAGTGATTTTCGATCGGTAAACAAAAGGGTACTTGAGCATGCACGGTGCTCGGTTGG AATTTTTGTTGATCGCGGGCTTGGTGGTGCATGGCAGGTGTCTGCAAGTAATGTTTCCTATTTCATTACTGTGGTTTTCT TTGGTGGTGGTGATGATCGTGAAGCTCTGGCTTATGGAGGTCGTATGGCAGAGCACCCTGGGATAAGATTAGCGGTTCTT CGCTTTGTAATGGAACCAAGGATTGTAGGAGAGGTTGTGAGAGTTGATGTTGGGGAGTCATCTACTACGGAGGATGAGTT GTTCCTTGCTGAGTTTAAGGTGAAAATAGCCAATGATGCTTCCATCATCTATGAAGAGAGAATAGTGAAAAATGCAGCAG AAATAGTTGCTGCTATCCGTGAGTATAACTGCTGCAATCTGTTTCTTGTGGGTCGAAGGCCAGCTGGTGAACTGGCTTGT TCTTTGAGAACAGGTGAGTGTCCAGAACTAGGACCTGTTGGCAGTTTGTTGGCATCACAAGATTGCGCCACGACTGCATC GGTTTTGGTCATGCAGCAGTATCACTACGGGGTGTCAATAGATTCTATTCCAGACACGGAGGAGCACTCCACTGATACTG AAAGAGATGCAGAATCTGCTTAACGGTTCTGTTCTTATATTGCTGCAGAACGAAGGCATGGGATAGGAGTCTAGGAATAA GAATGTGCCAGCAGGTGTCAGGGCAATTGATTTGCATTAGGTTTGTTTCATGTAGACTTGTTTCATGTTTTTTCCAGCAG TAAGTTTGTTTGTTTTTTGGATTGAGTGTTGTAAGCTAGGTTCATGAAAGCTTATTGAGTAAAAAGTAAAAAGTAAAAAC ATCACTCTGCTATCCAAAGACTTGGCTGGTTCTATTAAATGTAAATAATTTTGATATTGAAGAAGTTGTATCTTCACTTC CCCTAATGTGCTCTCATAATCTCATTACCTTTTTCTCACCATCCCACACATTCTCATCACCCTTAAGAATAC
CDS sequence (LotjaGi2g1v0437600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCAATGGTTGCTCGCCGCCAATGAAAGCCGCATCAAATGGTGCATTTCAGGGAGATAACCCTCTTGACTATGC GGTTCCCCTCGCTATTTTACAGATATGCCTTGTTCTTGTTGTCACAAGGGGCCTCGCATACCTTCTTAGACCTTTAAGGC AGCCACGAGTTATTGCAGAGATTATTGGAGGAATAATACTTGGGCCATCAGTGCTTGGACGAAGTACAAGCTATCTGCAT GCAGTTTTCCCACCCAAGAGTCTTACAGTATTAGATACTCTGGCAAACCTAGGCATTATATTCTTTCTATTCCTAGCAGG CTTGGAGTTAGATCCAAAATCTCTGCGCAAAACAGGATATAAAGTCCTTGGCATTGCTTTGGCCGGAATAAGCTTGCCCT TTGCACTTGGAATTGGTTCATCATTTGTTCTGCTAAAAACAATAGCCAAAGGTGTAAATAGTACTGCATTTCTTGTATAT ATGGGTGTTGCTCTGTCCATAACCGCATTTCCTGTGTTAGCCCGCATTTTGGCTGAGTTGAAACTTCTAACCACTGATGT TGGTAGAATGGCTATGTCAGCTGCAGCAGTTAATGATATAGCTGCCTGGATTTTGCTCGCACTGGCTGTTGCCTTATCAG GAAGTAGCCAATCTCCACTTGTGTCATTGTGGGTCTTCTTAAGTGGTTGTGGTTTTGTTGTTTGTTCAATCTTCATTGTC CTTCCAATTTTCAAATGGATGGCCCAACGATGCCATGAAGGTGAGCCTGTTGACGAGGTATACATATGTGCTACATTAGG TGCGGTTCTGGCTGCTGGGTTTGTTACAGATGCTATTGGAATCCATTCAATGTTTGGCGCATTTGTTCTTGGAATTTTGG TCCCAAAAGAAGGACCATTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTATTGCTCCCACTCTAT TTTGTGTCAAGTGGACTGAAAACTGATATAGCCACCATTCGCGGGCTGCAATCTTGGGGTCTTCTGGTTTTTGTTATATT TACAGCTTGTTTTGGGAAGATTGTTGGGACTGTTGGGGTATCTCTTTTGTGTAAAGTACCTTTTAATGAGGCTTTAGTGC TTGGATTCTTGATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGAT CAAACCTTTGCTATTATGGTTCTGATGGCTCTCTTTACTACCTTTATGACCACTCCTCTTGTGATCGCTGTGTATAAGCC CGCAAGGAAGGCAAGAATAGCTGATTACAAATACAGAACAGTTGAAAGGAAAAACACAAATAGCCAGCTGAGAATTCTTG TTTGCTTCCACGGTGCGAGAAATATTCCGTCAGTGATAAATCTGATTGAGGCTTCAAGAGGAACCCAGAAGCATGATGCA CTTTCTGTATATGCAATGCACCTTAAAGAACTTTCAGAGAGGTCCTCATCGATACTAATGGTACACAAGGCAAGAAGAAA CGGGTTGCCCTTCTGGAATAAAGCTCGTCATGCAGGTTCTGACCATGTCATTGTGGCATTTGAGGCTTACCAGAAGCTGA GCCAGGTGTCTGTCCGGCCAATGATAGCAATCTCATCCGTAGCTAGCATTCATGAAGACATTTGTGGAACTGCTGAGAGA AAGAGAGCCGCAGTCATTATCATCCCATTTCACAAGCATCAAGGATTGGACGGTTCACTAGATATCACACGAAGTGATTT TCGATCGGTAAACAAAAGGGTACTTGAGCATGCACGGTGCTCGGTTGGAATTTTTGTTGATCGCGGGCTTGGTGGTGCAT GGCAGGTGTCTGCAAGTAATGTTTCCTATTTCATTACTGTGGTTTTCTTTGGTGGTGGTGATGATCGTGAAGCTCTGGCT TATGGAGGTCGTATGGCAGAGCACCCTGGGATAAGATTAGCGGTTCTTCGCTTTGTAATGGAACCAAGGATTGTAGGAGA GGTTGTGAGAGTTGATGTTGGGGAGTCATCTACTACGGAGGATGAGTTGTTCCTTGCTGAGTTTAAGGTGAAAATAGCCA ATGATGCTTCCATCATCTATGAAGAGAGAATAGTGAAAAATGCAGCAGAAATAGTTGCTGCTATCCGTGAGTATAACTGC TGCAATCTGTTTCTTGTGGGTCGAAGGCCAGCTGGTGAACTGGCTTGTTCTTTGAGAACAGGTGAGTGTCCAGAACTAGG ACCTGTTGGCAGTTTGTTGGCATCACAAGATTGCGCCACGACTGCATCGGTTTTGGTCATGCAGCAGTATCACTACGGGG TGTCAATAGATTCTATTCCAGACACGGAGGAGCACTCCACTGATACTGAAAGAGATGCAGAATCTGCTTAA
Protein sequence (LotjaGi2g1v0437600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNGCSPPMKAASNGAFQGDNPLDYAVPLAILQICLVLVVTRGLAYLLRPLRQPRVIAEIIGGIILGPSVLGRSTSYLH AVFPPKSLTVLDTLANLGIIFFLFLAGLELDPKSLRKTGYKVLGIALAGISLPFALGIGSSFVLLKTIAKGVNSTAFLVY MGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDIAAWILLALAVALSGSSQSPLVSLWVFLSGCGFVVCSIFIV LPIFKWMAQRCHEGEPVDEVYICATLGAVLAAGFVTDAIGIHSMFGAFVLGILVPKEGPFASALVEKVEDLVSGLLLPLY FVSSGLKTDIATIRGLQSWGLLVFVIFTACFGKIVGTVGVSLLCKVPFNEALVLGFLMNSKGLVELIVLNIGKDRKVLND QTFAIMVLMALFTTFMTTPLVIAVYKPARKARIADYKYRTVERKNTNSQLRILVCFHGARNIPSVINLIEASRGTQKHDA LSVYAMHLKELSERSSSILMVHKARRNGLPFWNKARHAGSDHVIVAFEAYQKLSQVSVRPMIAISSVASIHEDICGTAER KRAAVIIIPFHKHQGLDGSLDITRSDFRSVNKRVLEHARCSVGIFVDRGLGGAWQVSASNVSYFITVVFFGGGDDREALA YGGRMAEHPGIRLAVLRFVMEPRIVGEVVRVDVGESSTTEDELFLAEFKVKIANDASIIYEERIVKNAAEIVAAIREYNC CNLFLVGRRPAGELACSLRTGECPELGPVGSLLASQDCATTASVLVMQQYHYGVSIDSIPDTEEHSTDTERDAESA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 4 | 784 | 781 | 0.0 | – | |
| PANTHER | 4 | 784 | 781 | 0.0 | – | |
| Phobius | 26 | 49 | 24 | - | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Gene3D | 30 | 434 | 405 | 9.6E-101 | ||
| Pfam | 37 | 421 | 385 | 8.5E-64 | ||
| Phobius | 50 | 60 | 11 | - | – | |
| TMHMM | 56 | 73 | 18 | - | – | |
| Phobius | 61 | 81 | 21 | - | – | |
| Phobius | 82 | 92 | 11 | - | – | |
| TMHMM | 88 | 110 | 23 | - | – | |
| Phobius | 93 | 110 | 18 | - | – | |
| Phobius | 111 | 121 | 11 | - | – | |
| Phobius | 122 | 145 | 24 | - | – | |
| TMHMM | 123 | 145 | 23 | - | – | |
| Phobius | 146 | 156 | 11 | - | – | |
| TMHMM | 155 | 177 | 23 | - | – | |
| Phobius | 157 | 178 | 22 | - | – | |
| Phobius | 179 | 189 | 11 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 190 | 212 | 23 | - | – | |
| Phobius | 213 | 223 | 11 | - | – | |
| TMHMM | 222 | 244 | 23 | - | – | |
| Phobius | 224 | 248 | 25 | - | – | |
| Phobius | 249 | 259 | 11 | - | – | |
| Phobius | 260 | 293 | 34 | - | – | |
| Phobius | 294 | 338 | 45 | - | – | |
| Phobius | 339 | 364 | 26 | - | – | |
| TMHMM | 340 | 362 | 23 | - | – | |
| Phobius | 365 | 370 | 6 | - | – | |
| Phobius | 371 | 391 | 21 | - | – | |
| TMHMM | 372 | 391 | 20 | - | – | |
| Phobius | 392 | 402 | 11 | - | – | |
| Phobius | 403 | 425 | 23 | - | – | |
| TMHMM | 403 | 425 | 23 | - | – | |
| Phobius | 426 | 796 | 371 | - | – | |
| MobiDBLite | 777 | 796 | 20 | - | – | |
| MobiDBLite | 781 | 796 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0437600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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