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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0443300 |
| Transcript ID | LotjaGi2g1v0443300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mg-protoporphyrin IX chelatase; TAIR: AT1G08520.1 ALBINA 1; Swiss-Prot: sp|O22437|CHLD_PEA Magnesium-chelatase subunit ChlD, chloroplastic; TrEMBL-Plants: tr|A0A1J7G395|A0A1J7G395_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0443300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93895437..93903207) extracted from Lotus japonicus Gifu genome v1.2.
GATTCTTCGCACTCTCTATTTGCTGCTACACTCAGATCAAAACCATACCTCTCTCTGCATTATCCTTATCCACCTTCCAA ACTCATCCGAACCCGTTTTCCAATCACTCGCGCTCAGTCTCAAAATGGAGCTGCGGTTGCTCCTCAAGCTCAACCTCAAC CTGACTCTAAATATGGAAGACAGTACTTCCCTCTAGCCGCTGTTGTAGGCCAAGTAAGTTCTAATCATTCACCATCTCTC ATCTTTTCCCCTTTCAATTGATTTGGTAGATGGGTTTTTTACAAATCCGTGGTTATTCTGCAGGATGCTATCAAAACTGC ACTTTTGCTTGGGGCCATTGACCCTGGGATTGGAGGGATTGCCATATCAGGAAAGCGAGGAACTGCTAAAACTATAATGG CGCGTGGATTGCATGCGATACTGCCGCCTATTGAAGTTGTTGTAGGTTCCATGGCCAATGCTGATCCATCCTGCCCAGAA GAGTAAGGTCACTGGTTTCTTCCATTTATCAGATAAATGTTTTATTAGCTAAATTCAACTTTAACAAAAGGTCTAATATT GTTTTCTATGTCGTAAAGGTAGATAAAGCTTAAGGGAGGAACAAATTGACATTGCTTGATTTTGTACATATGTATGTTTC CAGTGGAATGCCATCCGGTCATTCATAATTGATGATGCTTACATGCTGTTAACTATTCTTATATCTAATTGCTAAATTTG CATGTCATCTTGGAGATATACCAACTCAGTGTAGTTAGAACCAGCAATAGCAAATCCTTGCATTCCTCTGTATTTCAGTG ACTGAGTTTTTAAATTGATTTTAGGTAGCCCTGATTGACACTACATCTTTATGATCGGCGGGATGAATTAATTTTTTGTT GATCCCCTTTTTTAGTTTCACCACTCTGTCTTTGAATTAAAAACCATCTTGGATTAGTCTTTTTTCCTTTATTTAAATTT ATAGACCAAGAGGGTAATATTTGTAGGTGGGAAGATGATCTTACCGAACGTCTGGAGTATGATTCTGATGGAAATATTAA AACTCGTATTATCAAGTCTCCCTTTGTTCAGGTACTATTCAGGGAATAAGCTTTGCATATGTATGATCATGTTCTATCAT CAGAGATTCATTTTCTGTCCACTATCTGTGAAATTTTTCTTAAAATAATCATATATTTATTTATGCTTCAGATTCCTCTT GGAGTCACTGAGGACAGACTCATTGGATCAGTTGATGTTGAGGAGTCTGTGAAAACTGGAACAACTGTTTACCAGCCAGG CCTACTTGCAGAAGCTCATAGAGGTGTTTTATATGTTGATGAGATAAATCTTTTGGACGAGGGAATTAGTAATTTGCTCC TTAATGTATTGACTGAAGGGGTAAATACTGTTGAAAGAGAGGGAATTAGTTTTAAGCACCCCTGCAGGCCCCTTTTGATT GCTACCTATAACCCTGATGAGGGTTCTGTTCGCGAACATCTGCTAGATCGTGTTGCAATTAATTTGAGGTACAGCTGTAA TAGACTTTCTTTACCCTTTCAGGTTTCTTCTTTATTCTCCTTCTTTACAAGAGAGGTCCAAGACCTCGTGTGGATGGGGA AAGTAGGCCAAAATATTTCTTGAAATAGGAAAACTATATGCCATTGTCAAATGCTAAGTAAGCAACGATCATAGTTTGAT TAAATTCTCACCATTCATACAACAGATGGCCTTAAAACACACTGAAACTGTCCTCAAGTGATGGGATTCTTTCACTTTTT CCTACCTCAAATTTTTCCATCTCTATCCTCTCATTTTTTTGTATATTTATGCCTTCATTTCTTTTTCTAACAACAAATAT TTCATTTATATTTTTAGTCAAAATTCGAACATATGATTTCGCATCTGATATGGTAAGGAAGGCACATTGAAATTTTTTGT TATAAATGATCATTTCCTTTTGCAATAATAGTAAAAATTATTAAATTGGTAAATAACCATGACCTTATATTTAGCAACTG TAATGAGTTATCTAAATTTGATCATCTCTTCTAACTTTCCTCCCCTCTGCAGCGCAGATCTTCCAATGAGTTTCGAAGAC CGTGTTGCAGCTGTTGGAGTTGCTACAGAATTTCAGGAAAACAGTGGCCAAGTATTTAAAATGATTGAAGAGGAAACTGA CACTGCAAAAACTCAGGTATGTCTAGGAGGGAGCTAATGGGAACGGGATAGAAAAACTGAAGAAAAGATTGAAAAGAATA GGATTTTCAATTAATATCACTCTCCTCCTTGATTCTAAATCAGGAGGATGATTGCATCTTCACAAGGGAAGACAGAAAAA CACAAGTTACAGATAGGTATTTTTCACAACTCCTGGAAATCTGAGAGCCCTTGCTCTTATTCCGAACCTTCCAAATCCAA TCTGATCTATATTATTTCACCACTTATTACGTATACACTGTTTTTTCTCCTTCTCTCTTCTAATTCAGTTAGGGTCTCGA ACTAACTGCCAATACATCATAACTATATCAATATTCTGAACTAGCCCTAGTTTGCTCTGAACCAAAACTGACCAAAGTTC TATTCAGGGGTTCACCATTATTCCTCCTAATATATACCTTTTTGATTGGGGTTCTGCTGACAAGTTCCCCTGTATGTTCT ACAAGCTAATGTATAACGTAGGCAGTGATGCTATAACCATAATGCATAGGTTCACATTCCTAATGCCATTTTCACTAAAT GAATGAGGATTATGATATATGGAGAGGACCTACAGTAATTTCCAAAATTTAGATCAGTCCATGTCCCAGAGCTAAAAATA CCGGTTGACTCCCACAGCTGAGATTTGGCACACCTTATGACCAATTTACTGATTTTACAATTTTTTTGGCATGCTGTTTC TGCTGTCTGAATTCCTTTTGCCTTTTTTTTTCTTTTGTTCTATACCTAAATGGAACTTCTGAGTTCACACTGTTTTCCAC TATAGCTTTGCTCAGTAGATTGACAGTGACAATGCTGTAGCTTTACTTAATATTCATGTAATGCAGATCATCTTGTCTAG AGAGTATCTAAAGGATGTTACTATTAGCACAGAACAATTAAAATATCTGGTTATTGAAGCTTTACGAGGTGGTTGCCAGG TAATTTCTCTGTAATTCTTCCTACATTTTTCAGCAAAACTTTTGTATATGGTAAATTTAACGTCCATAACAGAATGAACA GATATCCAGAAGTTATGTCATTGGTTTTGAAATTTAGTCTATTATTTTTGCTCACTAACGAAAAACGATTCTGCTGTGTT ATCACTTATGAAGTAAATCAGCTCACAAATGCCTCATTCTTCTGTTAATTGAATACGAAAACATTCTTCTAATTTTATGA AGTTTCAAACCAGCAAGCATTGCATCAATCATCCACCTTTTTATTACTGTCACAATCGTTGTTGTCCTTACACACACACA CACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATGCACATACATATTAAGAGAAAGAAAGGTGAGAAACCGAG AGAAAATTTTCATCTATAGTGGATCTTTTATTCATAATGATTCTGATAATTACAAGAGATATTTACACACCCTTCAAGCT AAGCTTGCTTGAGAAGCGATACTCACGACAGTTATACTTGCCGGAGGGAAGAGTGAGCGAGAGGAAGAACTAGGCAATAT TAGAGATAGAGGTGATTAAACTTTTGTTTCAATGTATAATTTCAAATTTGAAGTCGCAATAGATTCTGTTGGAGAGTTAA ATCATTTTTTTTAACATTTTAACATGATATTTTTTCATTCTACAAATACTCTCTTCAAGAGAAAAAATGAACATTGATTT GCCCAGTTGTTTGGAGACCAAGCCAGTTTGAAAACCATTGTCATATGCATTGGTAATTTTGAATACTTGTTATGAACAAC AGGGACACAGAGCTGAGCTATATGCTGCCCGTGTTGCAAAATGCTTAGCTGCTCTGGAGGGACGTGAAAAGGTTTTTGTG GATGACCTAAAAAAGGCTGTAAGTGTTCTTTGATATTTAAATACAAGATTTTGGTACATCAGTTATGCCTCTGATTGGTT GCTTTACAGTTCTTATAGTCTTAGCCTTGGAGCAGAACTACTAAACATCTATAGTTTTAACAATGGAGGTTTCTCCTATA CCTTTCCTTTTTGTGAGGGTTCTGGTACCGATTAACAATTAGTGGTCAATGTTTAGCCATGTGTTCCACATACATAAAAT TTAAGTTCATCTAATTATTTTTTTGATTAATGTTTGAATTTGTTGAGAAGTCACACATTGACTAGTGATATAGTCAAAAA TCGTCCTCAAAAAGGGTAGAACAACCCTCACCCCTAAGCTAGCTTTTAGGGTACAGTTAGGCCTAACCCAAATTTGAAGA TGGTATCAGAGTCTATCTAGATCCGTTTATAGGAGACCACCCATATATGGGCCACCCGCAAATGTTCATTCTTGCAAATC CCACGCTCCAGATGTCCAGCCTTGGGCGTGAGGGGGTGTGTTGAGAATTCTCACATTGAGCAGAGATATGACCAAAGTAG TCCTTATAAAAGGTAGAACAACCCTCACCCCTAAGCTAACTTTTGGGATAGAGTTAGGCTGAACCCAAATTCTAAGAGAA TTGAAGGGACATGTGCGGCATATTTGCCATTAATTGTTTAGAGTACCAATAACCTCATAAAAGTTAGGATGCCATGCCAT CTCCTCTAATTATACATCCAAATGGCACATAGTTTAATGTCTCTATTAAGAGAAACATTTGCGAAAATCATATGTTGATA CTTTAGTAGTGGTACGGGCTGAGCAGATAATGAGCAACAGTAAGGATTTTTATAAATTTAATTTTATTACCCTGTGTTTT CTATTTTTGAGCTTAATGATATCTTGTGTTTCTATAAAATGAAAAAATAATGGAGAAAAAGTTTTGAAAGAACTTCATCT GAGCTGAAAGAAGTTATCGGCTCTACCCATCAAAACATCTTTGACCAACAGGTTATAAGTGAACAATTTGATACATACTA TCTCCAATATAATAAATTTAAATTTCAGCATGAGATAGTAATGTTCTAGGGTTTCATTGGACGCAAAACAATAGTCTCTC TTAGTTACAATAGAAAATAAATGAGCAAATATAAATAGGTAAAGAGTAAAAGACTATACTACCCCTAAGTTGTAAATAAC TAAATATAAAGCTATCTAACACTATGCTCTGTCCTTCTTTATCTTAGAGATGAAATGATTTTCTTTCTCCTTTCCTTGTT TCCATTAGTTTAAGCTTTTAAGGGTAGCCTGCTAATTGGAGTACTGGAAAGTGGAAAATGCCAAAAATCAACATGGTGAG CTGTTGACAAGTCACTACTAAGTCCATGAGAAGACTTGAGCACTTTAAAGCCAACAGTCTGACACAAGACTTAAGGAATG GATGAAGTCTCTGTAGCCTTTGGCAGACTTCATTCATAGTTTGCCCTTTCTTATGTTCACTGGCTACCACTAGCCTGAAA ACAGATCATACAATGATACCACTTTTTTGGTACTCATGATCGAACGATTATTTGATATGAATAACATGAAGGGAAAAAGA AGTTATTTGGCATCAACTTGCAGTTCAGCACTCAAGCAGCCTTCTCATTAGTTGTGACATTTGCTTGTGCCTTTTTGTTT TTTCTCCCCTGTGATGGGGCTAGGTTTTATTGGTGTTGGTAAGTGGTAGAAATCAGAAGATAAAGCTGACTGAGAACAAA CTGTTCCATCTCTCTTGCATCTTTATGTAGCTCAAAATTGTACAATTTCACAAAAATGGTGCGACTGACCAAATCAAACT GATATGGTCTCCAACAGTCCATGATGGGGATGAAGAAAAGCAAACTGATCTTCTCTGAGATAATTTCAAGAAACCCATGA ATACTCTAACTTGGTCTTAGTGACGCTATCTTTATATGTATCTAAATACTAACAAATTTGGTAAGTACAAGTATAGTAAA ATTAGTAGAAAACCATCAACAACACTTAATATGTACTTCTCATTATTACTTTCTGAAATTAAAGAACCTCTCTGACAAAC GGTTTATCATATATTTTGTAATTTGTAATACAGGTAGAATTGGTCATTCTCCCCCGGTCAATCATTACTGAGAAACCACC AGAGCAACAAAATCAGCCACCTCCACCTCCACCGCCTCCACAAAACCAAGAATCTGATGACGAACAGAAGGAAGAGGAAG AGGAAAAGGAAGAGGAAGAACAAGAGGTTGAGTGAAATCATCTTTCATGTTAAACAAAATTATGAGGACACTCCGATCCC TTTTTGAAAGCAATAAGTTTTGGTCTATTTGCCGAATAAGTTGTCCGTTTCTAGGACAGTGCATTTCCTTTCTTTCAAAA TGAATGTTTGTGTATAGACTTATTTGCATAATATTTTGGTACTGAAGAAACGCATGTAATGCTCAGTTAAGTTTTCATGT TTTAACATACACCTTGCTGTACCTGTATAATTTTGAATATTGTCTATATAAACAGGAGGACGAGGATAAAGAGAATGAGC AACAGGAAGACCAATTACCTGAAGAGTTTATTTTTGATGCTGAAGGGGGCTTCGTTGATGAAAAACTCCTCTTCTTTGCC CAACAAGCACAGAGAAAACGCGGGAAGGCTGGACGGGCAAAAAATGTCATATTTTCAGAAGACAGAGGCCGATACATCAA GCCAATGCTTCCGAAGGTACTCCTCGCTCCATTTGCGTCCGACAATTGAAAGAGATATCAAATATATCCAGCTAGTTTGC TCTTTCTAATTTTTCCTTGTACTTTGACGATGTCACTCAATATTAAAATTGAGTGATTTGATTACTTCATATCCGCTTGC ATTTATATCTCTGTAATGCCCATTGATTAATTATTTTTGATCTCAAGCTTACTTAATATCCATTACCAGTTCGCACTGCA TGTGTTTTCTTAAACAATACTGGTCATTGTTTGCAGGGCCCTGTAAAGAGATTAGCAGTTGATGCAACCCTTAGAGCTGC CGCACCTTATCAAAAGTTGCGAAGGGAAAAAGACACTGAAAGCCGTAGAAAAGTATATGTTGAGAAAACTGACATGAGGG CAAAGAGAATGGCACGTAAAGCAGGAGCATTGGTATAATGTTCTCTCAGTTCAGAACTTGCGTTTACAGTAATTAACATA AAAATATTGAGAATGATTTTACTATATTATCTCTAATCTTCCCTGATCTTCCTCCTATTATCTCTAACCTTAAAGACCTT TACTATTAATGAAGTATTGAACTTGTTTATTATGGGAAGCTTTTATACATTTTTTAACAGTTTTATTTGTTGCAGGTGAT ATTTGTGGTTGATGCAAGTGGAAGCATGGCTTTAAACAGAATGCAAAATGCAAAAGGTGCTGCACTTAAGCTTCTTGCAG AAAGTTACACAAGCAGGGATCAGGTAAGTAGGTCAGTTATTTTGACATTTAAGTGGAATTTAATGATAATTTAATGGTAA ATGGAAATGAGGCTTCATACTGTCAGAAATTACATGAGCCAATCTACCCTGTTGGTTTCCTAGGAATCCTTAGGCAGAAC ATTGAGTTTGAAAGATGAGACTCGTCATAATTCAAGTACAGCATACATACCCACCTCATGGGGAGAATCAGTGCTACCTT ATCACTAAAAATGATAACTCAAGCAATTTGGCATGGTTGTACTTGTATTTTCACGGTTAACCTGTGCTAGCTGTTACAGA TACAATCATGA
CDS sequence (LotjaGi2g1v0443300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCGTGGATTGCATGCGATACTGCCGCCTATTGAAGTTGTTGTAGGTTCCATGGCCAATGCTGATCCATCCTGCCC AGAAGAGTGGGAAGATGATCTTACCGAACGTCTGGAGTATGATTCTGATGGAAATATTAAAACTCGTATTATCAAGTCTC CCTTTGTTCAGATTCCTCTTGGAGTCACTGAGGACAGACTCATTGGATCAGTTGATGTTGAGGAGTCTGTGAAAACTGGA ACAACTGTTTACCAGCCAGGCCTACTTGCAGAAGCTCATAGAGGTGTTTTATATGTTGATGAGATAAATCTTTTGGACGA GGGAATTAGTAATTTGCTCCTTAATGTATTGACTGAAGGGGTAAATACTGTTGAAAGAGAGGGAATTAGTTTTAAGCACC CCTGCAGGCCCCTTTTGATTGCTACCTATAACCCTGATGAGGGTTCTGTTCGCGAACATCTGCTAGATCGTGTTGCAATT AATTTGAGCGCAGATCTTCCAATGAGTTTCGAAGACCGTGTTGCAGCTGTTGGAGTTGCTACAGAATTTCAGGAAAACAG TGGCCAAGTATTTAAAATGATTGAAGAGGAAACTGACACTGCAAAAACTCAGATCATCTTGTCTAGAGAGTATCTAAAGG ATGTTACTATTAGCACAGAACAATTAAAATATCTGGTTATTGAAGCTTTACGAGGTGGTTGCCAGGGACACAGAGCTGAG CTATATGCTGCCCGTGTTGCAAAATGCTTAGCTGCTCTGGAGGGACGTGAAAAGGTTTTTGTGGATGACCTAAAAAAGGC TGTAGAATTGGTCATTCTCCCCCGGTCAATCATTACTGAGAAACCACCAGAGCAACAAAATCAGCCACCTCCACCTCCAC CGCCTCCACAAAACCAAGAATCTGATGACGAACAGAAGGAAGAGGAAGAGGAAAAGGAGGACGAGGATAAAGAGAATGAG CAACAGGAAGACCAATTACCTGAAGAGTTTATTTTTGATGCTGAAGGGGGCTTCGTTGATGAAAAACTCCTCTTCTTTGC CCAACAAGCACAGAGAAAACGCGGGAAGGCTGGACGGGCAAAAAATGTCATATTTTCAGAAGACAGAGGCCGATACATCA AGCCAATGCTTCCGAAGGGCCCTGTAAAGAGATTAGCAGTTGATGCAACCCTTAGAGCTGCCGCACCTTATCAAAAGTTG CGAAGGGAAAAAGACACTGAAAGCCGTAGAAAAGTATATGTTGAGAAAACTGACATGAGGGCAAAGAGAATGGCACGTAA AGCAGGAGCATTGGTGATATTTGTGGTTGATGCAAGTGGAAGCATGGCTTTAAACAGAATGCAAAATGCAAAAGGTGCTG CACTTAAGCTTCTTGCAGAAAGTTACACAAGCAGGGATCAGGAATCCTTAGGCAGAACATTGAGTTTGAAAGATGAGACT CGTCATAATTCAAGTACAGCATACCTGTTACAGATACAATCATGA
Protein sequence (LotjaGi2g1v0443300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARGLHAILPPIEVVVGSMANADPSCPEEWEDDLTERLEYDSDGNIKTRIIKSPFVQIPLGVTEDRLIGSVDVEESVKTG TTVYQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNTVEREGISFKHPCRPLLIATYNPDEGSVREHLLDRVAI NLSADLPMSFEDRVAAVGVATEFQENSGQVFKMIEEETDTAKTQIILSREYLKDVTISTEQLKYLVIEALRGGCQGHRAE LYAARVAKCLAALEGREKVFVDDLKKAVELVILPRSIITEKPPEQQNQPPPPPPPPQNQESDDEQKEEEEEKEDEDKENE QQEDQLPEEFIFDAEGGFVDEKLLFFAQQAQRKRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKL RREKDTESRRKVYVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQESLGRTLSLKDET RHNSSTAYLLQIQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 470 | 470 | 1.2E-293 | – | |
| Gene3D | 1 | 164 | 164 | 7.2E-41 | – | |
| PANTHER | 1 | 470 | 470 | 1.2E-293 | – | |
| TIGRFAM | 1 | 470 | 470 | 2.7E-175 | ||
| SUPERFAMILY | 2 | 278 | 277 | 4.99E-36 | ||
| CDD | 61 | 271 | 211 | 2.16432E-5 | – | |
| Pfam | 80 | 147 | 68 | 2.4E-7 | ||
| Gene3D | 210 | 289 | 80 | 1.4E-10 | – | |
| Pfam | 228 | 286 | 59 | 7.8E-14 | ||
| MobiDBLite | 279 | 326 | 48 | - | – | |
| MobiDBLite | 284 | 299 | 16 | - | – | |
| Coils | 298 | 325 | 28 | - | – | |
| MobiDBLite | 302 | 326 | 25 | - | – | |
| SUPERFAMILY | 432 | 466 | 35 | 8.01E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Chlorophyll biosynthetic process | The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors. | ||
| Molecular function | Magnesium chelatase activity | Catalysis of the reaction: ATP + H(2)O + Mg(2+) + protoporphyrin IX = ADP + 2 H(+) + magnesium protoporphyrin IX + phosphate. |
Expression pattern of LotjaGi2g1v0443300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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