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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0448000 |
| Transcript ID | LotjaGi2g1v0448000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TAIR: AT1G33250.1 beta-1,3-n-acetylglucosaminyltransferase radical fringe protein, putative (DUF604); Swiss-Prot: sp|Q8BHT6|B3GLT_MOUSE Beta-1,3-glucosyltransferase; TrEMBL-Plants: tr|I1JAJ0|I1JAJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94186097..94193707) extracted from Lotus japonicus Gifu genome v1.2.
GTCAAAATCAAACTGATGAGCAACGGTTACTTGTTTGTTTGAAACATTCCTCTTCAAACACAACCTTTCTTCTTCGTTGT TGATTGTTCACAGCATCACTCGCTGTAACAGACACCACACCAGAAACAAGAGAATCCGACACCGCCACAACCACAAGGTA AGTTAGATCAATGCTTGCTTCGCTGTTTATTATTATTTTTTAATTTCAAAAGCAGAACTGAACTGTCAAACTCAAACACA CCTTCATTCAATCATTTTCAATAAAAACAAACGAATTTCTGAACTGTCAATTATTATAATAAGATAATATTTGTTTCAAC ATTATTCGTTTTAGAAAATGATTTCAAAATTAAATTTAAAATCATATTTTAATGAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGACTCGCGCGTTGAAACGTTCAACATCGAATTAATTAATGAAGACTGGAATTATTGTTTGATTTTGGCATGATTTGC AGGTTCCTTGCATCATCACCTGATTTCATTTCGGATGCAGATACATACTGAGATACATACATACATACATACATACATAC ATACATACATACATACATACATACATAGACTCCAACATGTAGCAAAGTCAATGGCGAAGTACCCACAACCCAACACCGAT TAGCCTCCATTTGTTGCTACTGCTGCAGTTTTGACTTGGACCAACTCGAATCCCATCACCACCACCACCTCCTCCGTCAC TGTTTTTCAGATAGGTAATGGCTTTTTCTACCACCTTTTCTGTTGGTTTTGCATCCTTGCCCATCACTTGTTTGATGAAA TGCTAAACTGTATAAGAAGTCAATCATGGCATCTCACTGTTTCTGTATTTTTCCATTGGGGTTTGTGGCGTGCTCTTCAC TTTGGGGTTTCTGATTTGGGAACTAATGGATGATGTACATATATCTATGCATATGATTTGGCTGAGATGGATTTCTATGT TGCTAGCTGCACCTTTGATTTTAAGCTTTTAACTTTCTAGGAAAACATTGATTAGTTGATAAAGTAGAAAGTACTCCTTA TGGATAGTAAAACGAAAAGAAGTCGAAAATTGAGAACTAGGTGTAAATGGAAAATATAATGAATTGAGTTGATTCAAATA TCTCCTTACTAACTGAATAATCAATACCTAACAGAACTAATCAGCAACTAACAGAATAATTTATGTGTCCTTATTGATCC TCTGGTTGATAGTATATAAAAATAAAAGATGTTAAAGCCTTAATCATGAAAAACTAAGGGTATCAATATAACCTGGAATA TAATCCATAATAAATAGGGTACCCTTTTGTTTTCGGCGTTTTTTCCTTCACTTTTGATCGGGAAGCTATGCTCTGATGTT GCTTAACTAGGTCAGGTACAGTTGTTGTATAGCTTTTAGATGTTTACATTCAAAACTGAAGTTTTTATAAATGAAGAAAC TATTAGCATCTGTCTTATTATGTTCCTTCTTCTTCTGGTTCTGTCTACTGAGTTTGTTTTATCCTCTCTATTTTGTTTGG TCTGAAGTTTTTTTGTTTTCTTAAGTAACGTTTTAAGTACCCTTGAGTCTATCATACAAAATGATGTGGAGACAAAGGGA GATAAAATGGAGGAATGCTTTAGGTATAATTTGTGGTAGGAAAGTACTTCAGAAACTTTTAATAGAAATTTCATCACACA ACTATGAGACCTGTAATGGTTTATATGGTTGAATGTTGAGCAGTTGAGCCAACAAGAAAACAAGAAGAGTTGTGGAGATG AGAATATTATGTTGAAGGAGTGTTTACAGTTATACATGATAAGAGTAGAAATACAAATCATTACAGAGAAAGTTGGGGTG GCTCCTATTGTAGAAAAAATTATAAGTCTTAGCTTAGGTGGTTTGAATATGTAAGGAGAAGACCTATAGAAGCATTGGTA AGAAAGGTGGACCAGATGGAGGGGATAGAGGAGAGTAAATTATTCAGAGGTAGAGGGAGACCAAGAAAAACTATGTGAAA CAATTAAGAGAAGTTTATAAATAAATGAGTTATCTTTAAACTTGATAAATGACAAGGAGTTATTGTGTTGCATGATCCAT GTAGCCAATCTCACATAATGGGAAAGGCCTTTGCTATTGTTGTTGCTGTTGTAAGTTTGTGTTATGTTCTGTAATAGTTC TTCTTTAATGGGCATTCTACTTCTGATAATCGAACTTTAGTTTTTTACGGATCGCTTCTCAACACTTTCTTAATGGCCCA GAGTGGTTATTTCAAGTTTCCAACTTCATGTTGATGTATTTTTTTGTATTATTAGAAGAATATGTGAATAGTTAAATTCA TATACTAGTTTTAGGGGGAAAGTAGCCCAAAAAAACCCAAAGGAGGTGGAAGAGAAGGAGAAGGCATTTGCAAGTGTGTT TGAGTGGGCGGTTTCAAACTTGATCTTGGATGATTTTGCCTGCATGCAGACTTATTAACTAAAACTTATTGGTTTGGTAA TTCTTTTGGATGTAGTTTATGGCAAGATCAACTTCTAAGTGTGTTTATGTTGAAGTTTGCAAAATTGATCTTCGATGATT TTGATTTTGGTTATATGTTAGTTTGAAGCTAGTTCCAAACATGTTCCCAAACACAATGTAAGTGTCATGCTGGGTTGACC TGCCACATGAATTGTTTAACAATTACTAATCATCATTGGTCAAAAAGTGTCTCCCAGTTCTTAATGCTTAACCACACATT CTATTTGATACTCACTTCAATATAGTTGACGTGGGTGTATGTTATGCCATACGTGGGGTGGATCAAGAGTTGTGCATTCA TAAAAGATGGTAGGTGATAACACAAGATATTAGAGATGAAAATGCTATGTGATCTAATACATAAGGTTAAATTGCTGCAC ATACATTTGAATGATTTTTTGCAACTATAAAATATGTGATTCTAGTCAAAGTAGTAGTATGAAGAATGCTATATAAACGT TTTCTATTTAACTGACATATTTGCAACCTATGTCTTATTTGGAAATTATTGTTCTCATTCTTTTGTCCGATAAAAAAATA TGAATTGACTTATGGCAAGGAAGATCATTCTAATGAAACAAGCAATAAAGCACTTTGCTAATAGAACCATTTTTAGGCTA TTTTTGTTTGTAAATACTCCCACAAATTATTCTAACTATACAAATGGAGCCTAAAGGATGAACTAAATTCCATTTGCTGT TTATAGGAGTTTACTTGATTTTAAAAGAAAGATCACTGAATATGGTCAAAAGTGAGAATAAGACTATATGTACTTGATGA GGATTTAACGTTATGTCTTCTGTAAGCTGATTGAAACTTTTTTGAAATTTTTGTTTCTATCTGGAAGGGTTTGCTAAGTT TCAAAGAGACTTCTTACTAGAAGAATTAGGTTAATAAAGATGAGAAACCAAGAGTTCAGCATGATCCATTTGATCAAAGT TCATTTTTCTCATGAATCTACTATTACTGAATGTATTGCATAGAAAATGAATGCTTTACAAGGTTAAGAGAAATGCAATT TGATGATCAACACAAATTTTGGAGTTTAATTCCATGATCTGTTCTGATTTCCCTAGTTTTTCACCTATCAAATTATTTAC AAGCTGTGCTTGGATTTCATTTAGTTTTCATTTTTCCCCTTTTGCCTGAAGTTGTCTGTATGTATTTGTAACATTTTCCT GTTATTTTTCTAATTTTGTAGGGTATAACAATTTTGGTTGGAGTGTATAACAAATTATTTGTAACGTTTTATCCTTTGGC CTTTGTACTCTCTCCTGGTGGTGGGAGGCAGACATGCACATTAGACTGATGGTGACGATGACTCGAACAATGAAAACGAT TATGTCACCCAATCATAATCATGAGAAGAATTCCCGTCTCTCTCCTTTGCCTCCTGGTCGACCTGGAAAACGTCAATGGC GCCAAAGCCGCACTGGTACCTTGGCTGTTGCCATAGCAGCACTTTTCTTGTGTACCACTGCTTGGCTTTCCCTTGTCTTC TCTGATGCAACTACCTGTTGCTTTCATCGCTTAAAGGAATGGGAAGGTAGACCCCACATTTTCCCTTGGAAGAAGTGCGT TCCTCGCCTTTCAAAAGTAACACCTCCATCTGCTCTTCAATTTGGGGCCATGGAAGATCATCTTCACAATGTTAGCAGTG TTGTTGAACAGGGAGTTTTGTCACTTGAACATATTGTTTTTGGCATAGCAGGATCATCTCAGCTTTGGAGACAGAGGAAG GAATATGTCAGATTGTGGTGGCGACCTGATGACATGCGTGGCCATGTGTGGTTAGAGGAACAAGTTGCTAAAGAACAAGG AGATGATTTATTGCCCCCTATCATGATTTCTGAAGACATCTCATATTTCCGCTACACTAATCCAATAGGCCACCCTTCTG GCCTCCGGATTTCTCGCATTGTCAGAGAGAGCTTTCGCCTTGGCCTCTCAGATGTGCGCTGGTTTGTCCTCTGTGATGAT GATACCATCTTCAATGTGAATAACCTAGTTGACGTTCTCAGCAAGTATGATTCCTCTGAAATGATTTATATAGGTAGCCC CTCAGAGAGCCATTCAGCCAATACTTATTTTAGTCACTCAATGGCCTATGGTGGTGGTGGGATTGCAATAAGTCATCCGC TTGCAAAGGCGCTCTCTGAGATTCTTGATGATTGCATTGAGAGGTATCCCAAGCTTTATGGTAGTGATGATCGACTGCAT GCCTGCATAACTGAACTTGGCATTCCTATGACCTGGGAGCATGGTTTTCACCAGGTATTGTGTTGATCCCTGTCCTTTTT CCTTACTTCCATCTTGTTTTGGTCAAATCTTTTTATATTCTTAAAAAAATGTTCATTACTTTCCTTCTTCTAGAAAAATG CAAAATTTGCTCAGATATTGTGTGGTTATTATCCAGCCGTTTCATCGCTCCAAAGTTGTAATTGATCAGGTTCAGGATTA ACTTTTCGTCTTTTAATCTTTCAGTGGGATATAAGGGGTGATGCTCATGGTCTTCTATCCTCTCACCCAATAGCACCATT TGTGTCAATTCATCATGTTGAAGCTGTGAACCCCTTTTATCCCGGCTTGAGCTCTTTGGATAGCCTGAAACTTTTCACAA GGGCCATGAAAGCTGATCCCAGGAGCTTTTTGCAACGATCAATATGTTATGACCATGCTCGGCACCTAACATTCTCGGTG GCACTTGGTTACGCAATCCAAGTCCTGCCTAACATTGTTCGTCCCCGTGACCTGGAGCGCACGGAACGAACCTTCTCTGC TTGGAATGGTATTAGTCATAGGAATGAATTTGATTTTGATGCTAGAGACCCACACAAATCTGTTTGTAAAAAGCCCATCC TCTTCTTCTTGAATGATACTCGAAGAGAGGGTAATGTTTCTTGGGGTTCATATATTCAGAGTAGAGATAAAGATGACTTC AAAAAGAGATTTTTTTGCTTTCCTCACTTCCCCCCTCTGCGCAGTGCGCGAGAGATCCAGGTAGTGGTGCAGCCTCTGAG CAAGAATTGGCATCTGGTATGTTTCATTGTACTGAGCATTTCATATGATGGTATTACCCGTTTTTCATCCGAATAACATT TCTAAATTTCACTGTTTTTGGTTGTCCTAGGTACCGCGTCGTCTGTGTTGCAGGCAAACCCAATCTGACAAAGAAATCCT CCAAATCTCAGTTGGACAGTGTGGGACAGGAGCTTTTAGCTCTGTATACTGACTCCGTATTAGGTGGGCTTTGGGATTGC ATGTTAGGGTTACTCACTTATGGTTTTTTTGTACATGATTTGACCTTAGAGTGAAGAGCTAATTCGTCGCGGATTTGTTT TTTTTTTTTCCTTGAATTGAGCTTTCTTGAACTCCTACTTATTTGTGCTGACTTAGTAGAAAGTAGAAACTTGTACTTGC AGATGGTAGATAAAAGTTTCCTAACACCAAAATCAGGACTATTCATTTTCACCTTTCATATTCCCATTTTCTCCTCTACA AAAGTTTCTTTTGCTATTATTATTAGAACTGATGCCAATGCTATGTGTCATCTCCAGACTGATTCAGATCCTCACGTTCA AACACTTTTACTATTTTTATCATCAATTAAAGATAGATATACCAATGAAATAAGTGGTAGTTAACATATAGCAGTGCTGT TAAAATATACGAAGGTATATTTTTTTCTTCGTAACATATAGCATTGCTGTTAAGATAATGCCGCCTACGGGTTGGTGCAA TCAGTTGGCTTGAAGGAGATAGTCTTTCTGTCTAAATCAAATCCAATCAAAATGTTTGATTGAGCAAAGTTGCCAAATAT ATAGTCTCCATCAGCAGTGCCAGCCATTGCAAAGCAAAACACCCCATCTTTTGGTGGAATGAAGGTTTGTATGGGCATCA ATTGCACATCTGCCCCTTCAAAATGTGCAGTCAAGATTGGTCCTTCCAAATTTGTCTCACTCCTGTAGCAAAGTTGTGTA CCCAAATCTGGGTCATTATCAACAGGCAGCAGGCTACTTTGCACCTTCAACTCCTCGACAAGACGGTCATAAAATTCTTG TGGTAAATAAGTTGCTGGTGTACCTGAATCAATCATCATATTCCCTTTGGAAAGCTTTTCTGAAGAATTGAAACTCACAA ATGTGTCTCCGACACTTATTCCTTCCAGTGTGACTAGATAAGGTGTCTGGCCTTCCTCAGAGACCAAAGGGGTTGTGACT ACTCCTTCACCTGAAACATCACTGGCATCGCCAAAGCTAATTGTTCCTGAAGTGCGCGAGTCAGCATGAAAAGGAACCAG GCACTGAGAGAATCTTCTGCTCCCATAAAGGGCACCCATTTGTGAAACAAGTGACAGAGGACCCCCACCCAGTCCTATCA CCCCCATGTCATTTTCATTGAATGCTCCTGAATTGCTGTGTCCACACCCAAATATAATGTCTCCAACAACAAGCTCATCA CCATTGGTGGGTGAACTGAATGTGATTGTTTCCCTTGCAAGCACACCTTTTGTTACTGAAGAATCTGCATAGCTGTAACT GTAGGCACACAGTTTTTGAGGAGAGCAAGAGTGACTAAAGAGGGAACCACACTGCTCTGAATCACATGGTATGGGATTGA ATGTTTTGGAACTCAGGGGCTCAAACATTGGACTTTTCTGCTTATAACAGCCATGACAAGGTGAACATTGTGCCCAAACC AAGTCACTGCCCGTGTCCACCAAACCATATATGTCCACTGGGGGCGATCCCAGAGTGAGCTTCATGAGATAGTCACCATT GTTGGATGTCACTCTGGTACTGAAGGGACCATTTGGAGCAAATGCTTTCTTGGGAACTTGGTGAAATGATGGAAGCTTAT GTCTATGAAGATTATCTGGTTTGTAGAAAGGAGAGTGGGGTGAGTTCTGGCGGGTTAGTTGAACACTGAACCCGGCGTCT TGAGCTTCAATTGGTGTTTGACATGAGAGCAAGTACAGAACAACAAGGAAACACAGATGGAAGAAGCAGAGAATGTTGGC CATGAAGTTTTGCAAGGGATAAAGTCATGTGAAAAAGTGGATTGGTTTATCTCATTTATATTGGCACGGCATGTGAGTTG GGGGAAGTTGG
CDS sequence (LotjaGi2g1v0448000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACATTAGACTGATGGTGACGATGACTCGAACAATGAAAACGATTATGTCACCCAATCATAATCATGAGAAGAATTC CCGTCTCTCTCCTTTGCCTCCTGGTCGACCTGGAAAACGTCAATGGCGCCAAAGCCGCACTGGTACCTTGGCTGTTGCCA TAGCAGCACTTTTCTTGTGTACCACTGCTTGGCTTTCCCTTGTCTTCTCTGATGCAACTACCTGTTGCTTTCATCGCTTA AAGGAATGGGAAGGTAGACCCCACATTTTCCCTTGGAAGAAGTGCGTTCCTCGCCTTTCAAAAGTAACACCTCCATCTGC TCTTCAATTTGGGGCCATGGAAGATCATCTTCACAATGTTAGCAGTGTTGTTGAACAGGGAGTTTTGTCACTTGAACATA TTGTTTTTGGCATAGCAGGATCATCTCAGCTTTGGAGACAGAGGAAGGAATATGTCAGATTGTGGTGGCGACCTGATGAC ATGCGTGGCCATGTGTGGTTAGAGGAACAAGTTGCTAAAGAACAAGGAGATGATTTATTGCCCCCTATCATGATTTCTGA AGACATCTCATATTTCCGCTACACTAATCCAATAGGCCACCCTTCTGGCCTCCGGATTTCTCGCATTGTCAGAGAGAGCT TTCGCCTTGGCCTCTCAGATGTGCGCTGGTTTGTCCTCTGTGATGATGATACCATCTTCAATGTGAATAACCTAGTTGAC GTTCTCAGCAAGTATGATTCCTCTGAAATGATTTATATAGGTAGCCCCTCAGAGAGCCATTCAGCCAATACTTATTTTAG TCACTCAATGGCCTATGGTGGTGGTGGGATTGCAATAAGTCATCCGCTTGCAAAGGCGCTCTCTGAGATTCTTGATGATT GCATTGAGAGGTATCCCAAGCTTTATGGTAGTGATGATCGACTGCATGCCTGCATAACTGAACTTGGCATTCCTATGACC TGGGAGCATGGTTTTCACCAGTGGGATATAAGGGGTGATGCTCATGGTCTTCTATCCTCTCACCCAATAGCACCATTTGT GTCAATTCATCATGTTGAAGCTGTGAACCCCTTTTATCCCGGCTTGAGCTCTTTGGATAGCCTGAAACTTTTCACAAGGG CCATGAAAGCTGATCCCAGGAGCTTTTTGCAACGATCAATATGTTATGACCATGCTCGGCACCTAACATTCTCGGTGGCA CTTGGTTACGCAATCCAAGTCCTGCCTAACATTGTTCGTCCCCGTGACCTGGAGCGCACGGAACGAACCTTCTCTGCTTG GAATGGTATTAGTCATAGGAATGAATTTGATTTTGATGCTAGAGACCCACACAAATCTGTTTGTAAAAAGCCCATCCTCT TCTTCTTGAATGATACTCGAAGAGAGGGTAATGTTTCTTGGGGTTCATATATTCAGAGTAGAGATAAAGATGACTTCAAA AAGAGATTTTTTTGCTTTCCTCACTTCCCCCCTCTGCGCAGTGCGCGAGAGATCCAGGTAGTGGTGCAGCCTCTGAGCAA GAATTGGCATCTGGTACCGCGTCGTCTGTGTTGCAGGCAAACCCAATCTGACAAAGAAATCCTCCAAATCTCAGTTGGAC AGTGTGGGACAGGAGCTTTTAGCTCTGTATACTGA
Protein sequence (LotjaGi2g1v0448000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHIRLMVTMTRTMKTIMSPNHNHEKNSRLSPLPPGRPGKRQWRQSRTGTLAVAIAALFLCTTAWLSLVFSDATTCCFHRL KEWEGRPHIFPWKKCVPRLSKVTPPSALQFGAMEDHLHNVSSVVEQGVLSLEHIVFGIAGSSQLWRQRKEYVRLWWRPDD MRGHVWLEEQVAKEQGDDLLPPIMISEDISYFRYTNPIGHPSGLRISRIVRESFRLGLSDVRWFVLCDDDTIFNVNNLVD VLSKYDSSEMIYIGSPSESHSANTYFSHSMAYGGGGIAISHPLAKALSEILDDCIERYPKLYGSDDRLHACITELGIPMT WEHGFHQWDIRGDAHGLLSSHPIAPFVSIHHVEAVNPFYPGLSSLDSLKLFTRAMKADPRSFLQRSICYDHARHLTFSVA LGYAIQVLPNIVRPRDLERTERTFSAWNGISHRNEFDFDARDPHKSVCKKPILFFLNDTRREGNVSWGSYIQSRDKDDFK KRFFCFPHFPPLRSAREIQVVVQPLSKNWHLVPRRLCCRQTQSDKEILQISVGQCGTGAFSSVY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 70 | 70 | - | – | |
| Phobius | 1 | 49 | 49 | - | – | |
| MobiDBLite | 17 | 42 | 26 | - | – | |
| PANTHER | 37 | 543 | 507 | 7.8E-260 | – | |
| PANTHER | 37 | 543 | 507 | 7.8E-260 | – | |
| TMHMM | 48 | 70 | 23 | - | – | |
| Phobius | 50 | 65 | 16 | - | – | |
| Phobius | 66 | 70 | 5 | - | – | |
| Phobius | 71 | 544 | 474 | - | – | |
| Gene3D | 128 | 330 | 203 | 6.0E-14 | – | |
| Pfam | 263 | 518 | 256 | 1.2E-97 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0448000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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