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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0452200 |
| Transcript ID | LotjaGi2g1v0452200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | StAR-related lipid transfer protein; TAIR: AT4G14500.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|Q9NQZ5|STAR7_HUMAN StAR-related lipid transfer protein 7, mitochondrial; TrEMBL-Plants: tr|A0A151SD34|A0A151SD34_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0452200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94523588..94527050) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGATTCTTTCTTCGATGTTGTGGAGTTTCTCAAGAAACCCTCCATAGCCGAAACATTCGTCGACATTTTGCTATG CGCGGTTCCGATTTGGCTCGCCGTCATGATCGGCTTGCTCATCGGCTGGTCCTGGCGTCCGCGTTGGACTGGGCTCGTTT TCCTCGGCTTCCGGAGCAAGCTTCGCTTCCTCTGGACTGCGCCGCCGGGGTTTGGTGCCCGCCGCCTCTGGTTCGCCTTC ACCGCCCTCTCCGCCTTCTCCATTTGCCGCACCTTCTGGTCCAATTTCAAAGGCAAGAAGAATAAGGCAGATCCCTCGCC TTCGCAGTCAGATGACGCTGCCGACTCCAATTCGGGGAACGCATCCAAACAGACTACTCGGTATCCCTCTCAATTTCCCT ATCTTTCTATGTCAATTTTCCATCAAAATTGGTATATCTGAGCTGTGATTACATTCTTCTAGCTGGTTAGGATTATAGAT TCGGATAAGATTTCCTCGAACACAATTGTGGATAGGAAAACCAAAATATTGAATTGGATGATGTATTCATTTATTGTTGA TAATTGTTCTTCAGCTTTTTAAGAAACTAGTTTTTAACATGGATGAATAGGAGTGGATAATTGTATTCGGTTTGATTGGG GATAGGGTATTCTGGTGGCTATCCCTTACCGGGTTTCTAGACCGTGGTTGCAGCATTGATAATCTTACAGCTTGTTGTGA ATTAGCACCTTAATAATTTACTTCAGTAGGTATTATGTTTGCTTTCGTTGATGTTTAATTGTTGTCTTTGCAATTGGTTG CTTCTACTTCTCGATGGCCTTTTAATGTGTTCTCATGTATTGCAACTTGGTTATTGTACATGCATTAGGTCTGGTGATAA GGCTGAGGAGAGAGGGAAGGATATTGTTACACAGGCTGATTTGGAAAATCTTCTCCATCTTCTTGAAAGCAAGGGTGGAG TGATGGACTGGCAATGTTTTATGGAGAGGTCAACGCCAAACATGCAGTATCAAGCATGGCGTCATGATCCTGAGGTAGAT TCTGTGGTTCAACTCTCATTGCATGCGGATATTGTCTATAATCTTACAAAAAGTTATTTATGTCTTATATTAATGGTTTA TTTGAACTTCCTTTCCATTAGAGGCACTGGTTTGAAGTGGATTTATGTCATAGTTGTTGCCATTCCATATTTCACATCCA AAAAGAATTATTACATTAGTCATCATCTATGTTGATGATTATTTCTTTTTATAGTTCCACCATTAAATATATCAGCACCT GATGTTGGATATTTCAACAGACAGGTCCTACAGTTTACCGTAGTAGAACTGTCTTTGAAGATGCAACTCCGGAGTTGGTG AGGGATTTCTTCTGGGATGATGACTTTCGTCCTAAATGGGATGCTATGCTTGCATACTGCAAAGTATTGGAGGAATGCCC TCAGAATGGGACAATGATTTCTCACTGGATTAAAAAGGTATTTGGACCAAATGTCTTAGAAACTATTGTATTTTTAAGTG TGCAATGGTATGGTTTACTGATATCTCATTTACTCTTTCTGTACAGTTCCCTTTTTTCTGCAGTGATCGAGAATATATCA TTGCTCGAAGAATATGGCAGGCTGGAAACACATACTATTGTGTCACAAAGGTAAGGCTGTGTTACCCGACTCATTACAAT ACAATTCCATTGCATTTTCTTTTGGTCCCCCCCCCCCCCTCTTTCCAAATGGCTACCCTCCATTATTCTATCACTTAAAA AGAAAGTCCTATTAAAATGCTAATGGCATATGAGAAAATTCCTGTGTGGTATTTTTTACCAAGTTTCATAATTTGAGCTA AATATTATCATATGAAGATAACAAGACAAGATAATTTTGTTGGCGATGTGAATACTAGTGCATATAACTTGTTGGTATAT TTGACTGTGTGTGTGGTCTTTACTGTATGTTTTACAGCATTTAATGGCATCCTTCATTTTTCATGAATAAAGAATTTAAT AAAGCTTTAACATTACCTGTTGCAAGGATTTGCCTTGTCTAGGAGTAAATGATTGTACAGAATTTAGTTCATTGAGTTCA ATGGCACTCCATTTTCTTTGCTTAGCGGTTTCTTAAAATCTTCTAATCATATAATTCATCAATTGTAAAGTATTTCCTAG GTCGTTCGAAGTTGTTAATATGATGATACACTTTACTTTCCATAATTATATACAGTCTGTTTCTCACATTTCTTTTAGTA ACTACTATACTAGCTAATCTAAATTTGTACACCTCCATTCCTTAATATCTGTCACTATTGAGAATTTTTTTTCTATTTAT TTGTCACTTTTGTAATTTCAAGAGAGCATTTACTACCAATTATATCCTTAACTTAACATAATTCTTAATGGTGAAAGGAA AATTGAAGAGTCAATTTTTAAGAGAGATAAAGGGTATATATGGATGTTTGAAGTTATTTTAACAAAAACAAGAACAAAAC ACTACTTTTTAATACATGTGTCAAAACCTTAAAGTGACAAATTTATAGGAACAAAAGGAGTATATATTTGTGAGGAGTAC TAGTCGCAACACTCTTGTCTAACTCTATTTCCAGCACACTCTCTCTAATTGGTTAAAATTTATTTGGATTCCATTAAATT GGGAGTGTAACCCATATAATTTAGTGGATTCCATGGACTTCAACCAATAAGGGAGTGGGTTAGAAAGAGTTTTCTTTGCA TTTCTCATACTGTCATACTTATATATGTGCCACTGCTGTTAATTGATTTAAGAGTGAGAGTGAGAGAGAGAATACATGAT GGTTATTCAGTGCAAGCACAAGGTTTATTACTGCTGTTCAATCTTCAATATTGTAGGGAGTGCCCTATCCAAGTTTGCCA AAACGTGATAAGCCAAGACGTGTAGATCAATACTTTTCTAGCTGGGTAATCAAACCTGGTAAGAATTTTCAAAAAAAACT ATTATTTGCTTGTTAGTGTTATCTATTCAATGGTGGTGTTTCAATTCCTGATTTGGGCAATTGATGCAGTGGAATCTCGC AAAGGAGATGGTCAGTTGACTGCATGTGAGGTTACGCTTTTGCATTATGAAGACATGGGGATTCCTAAAGATGTTGCAAA GCTAGGAGTCCGCCATGGGATGTGGGGAGCTGTCAAGAAACTGCACTCTGGTATGAGAGCATACCAGAATGCTAGGAAAG CAGACGCTTCTTTGTCAAGATGTGCACTGATGGCAAGTGAAACAACCAAGATGCCTTCTGATAGAATCATGCATTCCTCA GAGCCTGCATCTTGTGAGGAAGAGAATGTGCGGACCGTCAGTAATACCGCACATAAGGGTAATGGCATCGACTGGAAGTG GGTAGCTGTAGGTGGTACTTTTGCCCTAGTTTTGGGTGTTCATGGTGGTGCAGTAGGGCGAGCATTGGTTTTGGGAGCAG GGCACAGATTTGCTCGGAGGTGA
CDS sequence (LotjaGi2g1v0452200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGATTCTTTCTTCGATGTTGTGGAGTTTCTCAAGAAACCCTCCATAGCCGAAACATTCGTCGACATTTTGCTATG CGCGGTTCCGATTTGGCTCGCCGTCATGATCGGCTTGCTCATCGGCTGGTCCTGGCGTCCGCGTTGGACTGGGCTCGTTT TCCTCGGCTTCCGGAGCAAGCTTCGCTTCCTCTGGACTGCGCCGCCGGGGTTTGGTGCCCGCCGCCTCTGGTTCGCCTTC ACCGCCCTCTCCGCCTTCTCCATTTGCCGCACCTTCTGGTCCAATTTCAAAGGCAAGAAGAATAAGGCAGATCCCTCGCC TTCGCAGTCAGATGACGCTGCCGACTCCAATTCGGGGAACGCATCCAAACAGACTACTCGGTCTGGTGATAAGGCTGAGG AGAGAGGGAAGGATATTGTTACACAGGCTGATTTGGAAAATCTTCTCCATCTTCTTGAAAGCAAGGGTGGAGTGATGGAC TGGCAATGTTTTATGGAGAGGTCAACGCCAAACATGCAGTATCAAGCATGGCGTCATGATCCTGAGACAGGTCCTACAGT TTACCGTAGTAGAACTGTCTTTGAAGATGCAACTCCGGAGTTGGTGAGGGATTTCTTCTGGGATGATGACTTTCGTCCTA AATGGGATGCTATGCTTGCATACTGCAAAGTATTGGAGGAATGCCCTCAGAATGGGACAATGATTTCTCACTGGATTAAA AAGTTCCCTTTTTTCTGCAGTGATCGAGAATATATCATTGCTCGAAGAATATGGCAGGCTGGAAACACATACTATTGTGT CACAAAGGGAGTGCCCTATCCAAGTTTGCCAAAACGTGATAAGCCAAGACGTGTAGATCAATACTTTTCTAGCTGGGTAA TCAAACCTGTGGAATCTCGCAAAGGAGATGGTCAGTTGACTGCATGTGAGGTTACGCTTTTGCATTATGAAGACATGGGG ATTCCTAAAGATGTTGCAAAGCTAGGAGTCCGCCATGGGATGTGGGGAGCTGTCAAGAAACTGCACTCTGGTATGAGAGC ATACCAGAATGCTAGGAAAGCAGACGCTTCTTTGTCAAGATGTGCACTGATGGCAAGTGAAACAACCAAGATGCCTTCTG ATAGAATCATGCATTCCTCAGAGCCTGCATCTTGTGAGGAAGAGAATGTGCGGACCGTCAGTAATACCGCACATAAGGGT AATGGCATCGACTGGAAGTGGGTAGCTGTAGGTGGTACTTTTGCCCTAGTTTTGGGTGTTCATGGTGGTGCAGTAGGGCG AGCATTGGTTTTGGGAGCAGGGCACAGATTTGCTCGGAGGTGA
Protein sequence (LotjaGi2g1v0452200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDSFFDVVEFLKKPSIAETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLVFLGFRSKLRFLWTAPPGFGARRLWFAF TALSAFSICRTFWSNFKGKKNKADPSPSQSDDAADSNSGNASKQTTRSGDKAEERGKDIVTQADLENLLHLLESKGGVMD WQCFMERSTPNMQYQAWRHDPETGPTVYRSRTVFEDATPELVRDFFWDDDFRPKWDAMLAYCKVLEECPQNGTMISHWIK KFPFFCSDREYIIARRIWQAGNTYYCVTKGVPYPSLPKRDKPRRVDQYFSSWVIKPVESRKGDGQLTACEVTLLHYEDMG IPKDVAKLGVRHGMWGAVKKLHSGMRAYQNARKADASLSRCALMASETTKMPSDRIMHSSEPASCEEENVRTVSNTAHKG NGIDWKWVAVGGTFALVLGVHGGAVGRALVLGAGHRFARR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 437 | 437 | 4.6E-229 | – | |
| PANTHER | 1 | 437 | 437 | 4.6E-229 | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 21 | 45 | 25 | - | – | |
| Phobius | 46 | 75 | 30 | - | – | |
| TMHMM | 71 | 93 | 23 | - | – | |
| Phobius | 76 | 93 | 18 | - | – | |
| Phobius | 94 | 440 | 347 | - | – | |
| MobiDBLite | 99 | 137 | 39 | - | – | |
| MobiDBLite | 101 | 126 | 26 | - | – | |
| CDD | 140 | 348 | 209 | 3.86236E-104 | – | |
| Gene3D | 141 | 351 | 211 | 3.4E-50 | ||
| SUPERFAMILY | 142 | 349 | 208 | 2.53E-40 | – | |
| ProSiteProfiles | 161 | 350 | 190 | 25.633 | ||
| Pfam | 187 | 314 | 128 | 2.0E-8 | ||
| TMHMM | 407 | 429 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi2g1v0452200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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