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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0456100 |
| Transcript ID | LotjaGi2g1v0456100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT5G26340.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q94AZ2|STP13_ARATH Sugar transport protein 13; TrEMBL-Plants: tr|V7CJU4|V7CJU4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0456100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94922581..94928330) extracted from Lotus japonicus Gifu genome v1.2.
GGGGCTTATTCACTCCCAAGTCTACATTGCAACTTCATCTACTTCTACTTTTCTACTTTCTCTCTCTCTCTCTCTGGCTT TCACTCTCTCTTGTTCCTTCTCATATTTTCATTCATTCATTCCTCCCAATCTTCCGATTCAGCAATTCGCATAACATTCG ATTGGTACTTGCTAGATCGCATCCATGGCAGGCGGAGGTTTCGCCACCAGTGGTGGCGGCGATTTTGAGGCAAAGATCAC TCCCATCGTCATTATTTCCTGTATACTGGCGGCCACCGGTGGTCTCATGTTTGGTTACGACGTCGGCGTTTCAGGTAACC TCTCTCTCTCTCTCTCTCTCTCTCACTCTCTGTTTCCTTCATTATTGTTTGCTCGTTCGTCAACCTCAACCCTGCACATG TTAATCAATTTCTCTTTGCATAAATCAAATAGAAAACGCTCCTTTCAACGCTTTTACGACACTTTCTGTGTTAATTGATT TTTTTTATTTGATGGTTGAGTGGCCCTTGTTTGGCTGTTTTGGCTAATCGATTTTGAGCACGAAAAGTGAAATTAACATG GTAGTAGCTGTCAAGAACCAATTATTATGGGATAATCTTAGGTGGATATATAATGGAACTTTGTTTTTGTTTAATTTTTG TACCCAAAAAAACGGTTCGCTCGTTTGTTATTTGTTCGATAAGGATCACAACGATGCATGACTCATATCTTACGGGAATT AATCCAAACTATGCATGTGATGTGAGTCCCCATCCTAAAATCACCGTCAACCACTTCTTTATTAAGTAATCAACCTCAAA GGGGTATTTTCAACATTTCACTAGTGGCTAGCATTCATCAATAGTTTGTTATATGTATGATGAGATATTAGGATCACACT TAATTAAAAAAAACTAATTAATTATAATTATTAATTAATACAAGCTTATATTGATGTAATGTTTCTTGTGTGTGTCAGGT GGTGTTACGTCCATGCCACACTTTCTGCATAAGTTCTTTCCAGATGTATACAAAAAGACAGTGTTAGAGAAAGAACTGGA CAGTAATTACTGTAAATATGATAATCAAGGGCTGCAACTGTTCACATCGTCCTTGTATCTGGCTGGTTTGGTTTCTACTT TCTTCGCCTCATACACAACTCGTACATTGGGGAGAAGGATGACCATGTTGATTGCTGGCGTCTTCTTTATTGCTGGGGTT GTCTTCAATGTTACTGCTCAGAATCTTGCCATGCTCATTGTTGGCAGGATTTTACTTGGTTGTGGTGTTGGTTTTGCCAA TCAGGTAACTATTTTTTCTTTTCACGTTATATTATTAATATTTTTTTTTAATATAAGTAGTTATATTGGAGTAAAATTAC AATTTTGAATTCAGTTCCATTTAGAAAAAAGTTTGAAAGGTACACTTTTGTTTGGTTAAGAAAAGTTAATGTGACATGTG CTTAGATATTTTTCAATTAGTTACAATTATATATTGGAGTGAACCAAACTTAATTATTGAATGCTTATTGTGTCTGTTTT TGCTTGTGTGCCAAATAACAATACTCTTGTTAAATAAAAGTATTTGCATATGTACATATCTTTCATTGATTAGTGAATTG TTTTTTTTTTTACATCAAAAGTGAATATTATTAATAATAAATGAGCCATCAAAAGTGAATTGTTTATATTTGTTCAACAA ACTCAAGGATTTAATAATTTGCTCATTTAGACCAAAGTTTTTTTTTTAATACGAAGGTTCAAACAAGATGTTCAGGGAAT CTCAAACTACTCTTTATCAATGTGATTACAATTTTGAAGTACCATTTGTCTTTTTTTTATATCTCGAAACTTATTCTGTA AAGATTCTGGTATCTTTTTCGTCTGAATTATGCCATTTTTTTACTTGATGTGTATTGCGTATCTCTATAACATGGCCCCA CGCATGGATATTTAGAAAGTATTTGATATATAAAAATCTTAAAAGCATTATCGAGTTGATGAATGCCCCACCATAATATT GTGGATTGTCAAAGCTGCAATGAGAAACAAGATTATAGTTTGAACCTAGGCTTTTATGTGACACTTGTCCACAATTTTTC CTAGTCACTCTCAAAGTCACAATCACTCCCAAAGTCACAATCACCCGTTACCCCAACTATTATTTTCATTTGACGTTTAT TACACATGAATGTGATAGGCACTTTTTTATTATACATACATATATATATATATATATTATTTATGTTGAAATGAGTTTCC ACATTTGAGTTGAAAAGTCTTTTAGCTAGGTTCTGCAGCCTAATATGTTTGTAGTTTACAAATTGTATTTTTCTGCCATT TTTTTAGTCATTACTTGGACTTTAATTGTGATTCATCACTTATAGAAGCAATACAACTAATCTGCTTGTGGTCCAGATCA ATTATAATACTAATGTAATTAGAAGTAAACTCTGATTGAGAAATAATGGTACCAAAAGCAAATTAACATTACTGGTAGCA TTTGCATTAATTGGTAATCTCACTCACTTCACTTTGTTATTCAATTTGATGACAGGCGGTGCCGTTGTTCCTCTCTGAAA TCGCACCTTCAAGAATTCGTGGAGCATTGAATATTCTGTTCCAGCTCAATATCACCATTGGAATTCTCTTCGCCAATCTC ATCAACTATGGCACCAACAAGTAAGTAATTAACTTGTGTGTTATCACTGCTTACTTGTATTTAATTGAGTAGTACTTCAT GGAAAATGAAAGTGAATCACATGATGTGTTAGGAAAGAACAAAATCAAAGTCACAAATTTTCTCTGTGCTGACAACAACA TGCTCAGTTTTTCATTACCAGTAGTAATTAACAAATCAAATTAAAGCATAGTATGGTGGTAACGGTCAAAATTGTCATGT TGATGGGCCTAACGGATAGAGACTGTTGAATAGAAAATATCAGCCAGTTCTATGTATGACTTTTATTCCTTAGTAGTGTG TAATATAATCTCCAGCTAATCCGGTATACAGGGACAAGTGTCTTTTATTTTTGTTGAATGGGAAATAACGGGACAAGTGT CTAATTATTTATTGTAACCAATCTTTTTGTTGTTGTCAACATTGTTCAGCCACAGGTGTTAGTTTTGGACCAAAAAGTTA GTGAATACTCCAAAGAAATGTCGATTACAATCTTCTAAAAATTTTAACCACAAAGAATTGGACCCAAAAATAACCACTAA TATCAGACATTGAATTTGTTTTTTGTGAAATATTAAAAGCAAGTATAGTAACTACTCCAACTAATATCAACTTGAACTAC ACTTCTCATGTAAATAATACTTATTCGTTTCGTTTTTTTATGTCATTTATTCTTTTTCTATTAAAAGAAACAAAACACAC ATTGTTTACATAATGGTGATAATAAAATTATGTGATGTTTCCTTTTCTTTATGGGTCTAATTGTGAGGTAGAATAAGAAC ATTATGTCTTAACAATTGCTACATTAGTTTGTCTTGGGATAGAATGATTACTAGCTAGTATGTAGTATCTTTTGACAAAA TAATGGTGTACTATGAGTTTGTTGTGCTTTGTTTTTTTCTTTTTCTGATTCAGCATCATTGACTGTTATTGATGTTGTGT TCTGTGCTGACAGAATCAAAGGTGGATGGGGCTGGAGGCTATCTCTGGGTTTGGCCGGTATCCCTGCAGTTCTTCTTACC GTTGGGGCCTTGTTGGTGGTAGACACTCCCAACAGTCTCATTGAGCGCGGTCGGACCGAAGAAGGAAAAGCTGTGCTAAA GAAGATTCGAGGCACTGACAACGTTGAACCCGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTGTTGCTAAAGAAGTTAAGG ACCCGTTCAGGAACCTTCTCAAACGCAGAAATCGACCCCAAATCATCATCTCCATAGCCCTGCAGGTAAGAGCATGTTTA CAAAAGAATTTCATAACATTACTCTACAAAACCGACTTTTTTTTTTTCTTGAAAGAATTCAAATATAAATCACATAATTC AACTCACTTTCACCTTTACTATACGCAATTTTAGTAGATCAATTCTGCTATTGCTAATACAAAGATACACCAAGTATTAA GCTACATACTTAAATTCTGCTACCAAAGACACACTAAGTGTTAAGTTATATACATACATAGCAGTTCTCTCCTTGCAAAG TTCAATTGCTGATTCATGTTTTGATGTTCAAAAACAGATCTTCCAACAATTCACAGGCATCAACGCGATCATGTTTTATG CACCAGTGCTGTTCAACACATTGGGATTCAAGAATGATGCTTCCCTCTACTCTGCTGTGATCACAGGGGCTGTTAATGTC ATCTCCACAGTTGTCTCCATTTACTTTGTTGACAAACTTGGACGCCGTGTTCTCTTGCTGGAGGCTGGTGTGCAGATGTT CGTATCTCAAGTGGCGATAGCAATCATCCTGGGACTAAAAGTGACGGACCATTCTGATGATCTTTCAAAGGGTTTCGCGA TTCTGGTGGTGGTTTTGGTCTGCACTTTTGTGTCCTCCTTTGCTTGGTCTTGGGGTCCTCTTGGGTGGTTGATTCCAAGT GAGACATTCCCTCTGGAGACTCGCTCGGCCGGGCAGAGTGTTACTGTCTGCGTCAACTTGCTCTTCACCTTCGTCATTGC GCAGGCCTTCCTCTCCATGCTGTGCCACTTCAAGTATGGCATTTTCTTGTTCTTCTCTGGCTGGGTCTTGATCATGTCTT TGTTTGTGTATTTCCTTGTGCCCGAGACGAAGAATGTGCCCATTGAAGAAATGACTGAGAGAGTGTGGAAGCAGCATTGG TTCTGGAAAAGGTATATGGAAGATGATTATGTTGCTAATGAGAAAGTTGCTAATGTCAATGGGACAACTAAAGGATTTGA TCCTGTTTCCCAGTTGTAAATTGCTCTAGTTCCGGCAAAATACCAAATTAGTAGTATTTTTAGGTTCTAGATTATGCTGT GAAGGGTTTTAAAGTTAAGTAAGGTACTAGTTTTATGTCTCAACTTAATAATCAGCACATTATAAATTTTCCCATTTTTT AAGCCATATAAGATGGTATTTTCTTTTTCTTTTTTCTTGTTTTTGAATGCATATTCCGTACACATTGTTTATCTTTGGAA GAAATGATGTAGATTGATTTCCAACCCACACAAAGCCATAATATCTGCGAATGAAATCAATGAATGAATATACACCTTTG ATTTTGAAGTATAATACTTGCATTGTCATAGTTCATTCACTTTCAATGATTACTTTTATTCCTGCTAGCAACAATGCATA AATCTTGAGCTATTATTCTCATTCAATAGCTTCTGAGTATCAGTAAAAATAAAATGAATCCAATATCAATGTCTCCATAT CTAAAATTCTAAATATATACAGAAATAATTATGTAGTGCTATGATTGGTGGCGATAACAACCTTGCTGAGAAGAATAACC ACCATCACCGGAAATAGACTTTCTTATGCTTTCACTAATCAACTGCTTTGCTGACTCAATTTGCTCTGGAGCCCCAACAA TTTTCAATGTCATTCCTGTTGGCATGCCATGAATAAGGGATCTAAAGGTATCCCCTGAATTCTTGCTCCACTCAAGTCTT GCATATATTTGTTAGTCTCTCCTCTGTCTCCAATGATAAGGCCAACCATGCTATTTGGGATATTAGTTGGGAATAAATGA GTAGCATGTTCAGCAAGAACTTGGTTGATGAGTTCCTCAGCAGAGGCAACAGCCTGAGGAGTAGTGCCCT
CDS sequence (LotjaGi2g1v0456100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGCGGAGGTTTCGCCACCAGTGGTGGCGGCGATTTTGAGGCAAAGATCACTCCCATCGTCATTATTTCCTGTAT ACTGGCGGCCACCGGTGGTCTCATGTTTGGTTACGACGTCGGCGTTTCAGGTGGTGTTACGTCCATGCCACACTTTCTGC ATAAGTTCTTTCCAGATGTATACAAAAAGACAGTGTTAGAGAAAGAACTGGACAGTAATTACTGTAAATATGATAATCAA GGGCTGCAACTGTTCACATCGTCCTTGTATCTGGCTGGTTTGGTTTCTACTTTCTTCGCCTCATACACAACTCGTACATT GGGGAGAAGGATGACCATGTTGATTGCTGGCGTCTTCTTTATTGCTGGGGTTGTCTTCAATGTTACTGCTCAGAATCTTG CCATGCTCATTGTTGGCAGGATTTTACTTGGTTGTGGTGTTGGTTTTGCCAATCAGGCGGTGCCGTTGTTCCTCTCTGAA ATCGCACCTTCAAGAATTCGTGGAGCATTGAATATTCTGTTCCAGCTCAATATCACCATTGGAATTCTCTTCGCCAATCT CATCAACTATGGCACCAACAAAATCAAAGGTGGATGGGGCTGGAGGCTATCTCTGGGTTTGGCCGGTATCCCTGCAGTTC TTCTTACCGTTGGGGCCTTGTTGGTGGTAGACACTCCCAACAGTCTCATTGAGCGCGGTCGGACCGAAGAAGGAAAAGCT GTGCTAAAGAAGATTCGAGGCACTGACAACGTTGAACCCGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTGTTGCTAAAGA AGTTAAGGACCCGTTCAGGAACCTTCTCAAACGCAGAAATCGACCCCAAATCATCATCTCCATAGCCCTGCAGATCTTCC AACAATTCACAGGCATCAACGCGATCATGTTTTATGCACCAGTGCTGTTCAACACATTGGGATTCAAGAATGATGCTTCC CTCTACTCTGCTGTGATCACAGGGGCTGTTAATGTCATCTCCACAGTTGTCTCCATTTACTTTGTTGACAAACTTGGACG CCGTGTTCTCTTGCTGGAGGCTGGTGTGCAGATGTTCGTATCTCAAGTGGCGATAGCAATCATCCTGGGACTAAAAGTGA CGGACCATTCTGATGATCTTTCAAAGGGTTTCGCGATTCTGGTGGTGGTTTTGGTCTGCACTTTTGTGTCCTCCTTTGCT TGGTCTTGGGGTCCTCTTGGGTGGTTGATTCCAAGTGAGACATTCCCTCTGGAGACTCGCTCGGCCGGGCAGAGTGTTAC TGTCTGCGTCAACTTGCTCTTCACCTTCGTCATTGCGCAGGCCTTCCTCTCCATGCTGTGCCACTTCAAGTATGGCATTT TCTTGTTCTTCTCTGGCTGGGTCTTGATCATGTCTTTGTTTGTGTATTTCCTTGTGCCCGAGACGAAGAATGTGCCCATT GAAGAAATGACTGAGAGAGTGTGGAAGCAGCATTGGTTCTGGAAAAGGTATATGGAAGATGATTATGTTGCTAATGAGAA AGTTGCTAATGTCAATGGGACAACTAAAGGATTTGATCCTGTTTCCCAGTTGTAA
Protein sequence (LotjaGi2g1v0456100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGFATSGGGDFEAKITPIVIISCILAATGGLMFGYDVGVSGGVTSMPHFLHKFFPDVYKKTVLEKELDSNYCKYDNQ GLQLFTSSLYLAGLVSTFFASYTTRTLGRRMTMLIAGVFFIAGVVFNVTAQNLAMLIVGRILLGCGVGFANQAVPLFLSE IAPSRIRGALNILFQLNITIGILFANLINYGTNKIKGGWGWRLSLGLAGIPAVLLTVGALLVVDTPNSLIERGRTEEGKA VLKKIRGTDNVEPEFLELVEASRVAKEVKDPFRNLLKRRNRPQIIISIALQIFQQFTGINAIMFYAPVLFNTLGFKNDAS LYSAVITGAVNVISTVVSIYFVDKLGRRVLLLEAGVQMFVSQVAIAIILGLKVTDHSDDLSKGFAILVVVLVCTFVSSFA WSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLSMLCHFKYGIFLFFSGWVLIMSLFVYFLVPETKNVPI EEMTERVWKQHWFWKRYMEDDYVANEKVANVNGTTKGFDPVSQL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 11 | 501 | 491 | 4.0E-261 | – | |
| PANTHER | 11 | 501 | 491 | 4.0E-261 | – | |
| Gene3D | 14 | 489 | 476 | 7.7E-125 | – | |
| TIGRFAM | 19 | 483 | 465 | 9.7E-123 | ||
| Phobius | 21 | 38 | 18 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| ProSiteProfiles | 25 | 476 | 452 | 46.236 | ||
| Pfam | 26 | 485 | 460 | 1.1E-124 | ||
| SUPERFAMILY | 27 | 485 | 459 | 1.16E-58 | ||
| CDD | 28 | 474 | 447 | 0.0 | – | |
| PRINTS | 33 | 43 | 11 | 9.0E-32 | ||
| Phobius | 39 | 81 | 43 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 82 | 100 | 19 | - | – | |
| Phobius | 101 | 111 | 11 | - | – | |
| Phobius | 112 | 130 | 19 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| Phobius | 131 | 135 | 5 | - | – | |
| Phobius | 136 | 158 | 23 | - | – | |
| PRINTS | 137 | 156 | 20 | 9.0E-32 | ||
| TMHMM | 140 | 162 | 23 | - | – | |
| Phobius | 159 | 169 | 11 | - | – | |
| TMHMM | 169 | 191 | 23 | - | – | |
| Phobius | 170 | 191 | 22 | - | – | |
| Phobius | 192 | 202 | 11 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 203 | 223 | 21 | - | – | |
| Phobius | 224 | 283 | 60 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 284 | 308 | 25 | - | – | |
| PRINTS | 294 | 304 | 11 | 9.0E-32 | ||
| Phobius | 309 | 319 | 11 | - | – | |
| TMHMM | 320 | 342 | 23 | - | – | |
| Phobius | 320 | 342 | 23 | - | – | |
| ProSitePatterns | 338 | 355 | 18 | - | ||
| Phobius | 343 | 348 | 6 | - | – | |
| TMHMM | 349 | 371 | 23 | - | – | |
| Phobius | 349 | 371 | 23 | - | – | |
| Phobius | 372 | 382 | 11 | - | – | |
| Phobius | 383 | 404 | 22 | - | – | |
| TMHMM | 386 | 408 | 23 | - | – | |
| PRINTS | 389 | 410 | 22 | 9.0E-32 | ||
| Phobius | 405 | 424 | 20 | - | – | |
| PRINTS | 412 | 424 | 13 | 9.0E-32 | ||
| TMHMM | 421 | 443 | 23 | - | – | |
| Phobius | 425 | 445 | 21 | - | – | |
| Phobius | 446 | 450 | 5 | - | – | |
| Phobius | 451 | 472 | 22 | - | – | |
| TMHMM | 453 | 472 | 20 | - | – | |
| Phobius | 473 | 524 | 52 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0456100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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