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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0460200 |
| Transcript ID | LotjaGi2g1v0460200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT2G14760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84; TrEMBL-Plants: tr|G7K0X1|G7K0X1_MEDTR Transcription factor; Found in the gene: LotjaGi2g1v0460200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95367559..95372096) extracted from Lotus japonicus Gifu genome v1.2.
ATAAGATGTTACTAGTAGTTATAAAAAATAACATTGTACAAAATCACCTATCTTATGCTAAAATTTACTTCTTATGGTAA ATAAATTGAGTAACAAGAGTATAAACCACTTGATCATAAAAGACATATATATCAACACCATTTTATAAATAAAATATCTC CAATGTTTAAAGGTAGTTGGTTCATGACAAGTAGCCCCTTAAAAGTATTTATACTATTAGATAACACAGAATCTATTAAT AGCCATATTCAAAATAACTGTAAACCAAACGTAATTGAATAATTAGGAAAATTTTGTACTTAACTTTATGCTTCGCATGG CTTGTATAATACTCCCAATTTATATATTCCCTAATTGTAATTTGCTTATTCAAAATAACATAAACTATTATGTAATTTGT GCTCCAATTGACACCTTACAGAAGATAATAAATCACTAGTCAGTACTCACTACCCATAAGCCACATATATATCATAATAG TAACGAGATTAAATTTGTTTATCAAGTAGTGCCCAGTGCATATCTTTAGACTTTAGGCCACACACGGATCAAGTTTGTCA TGAATTGCCTGATTTTTTACCATGTCAACTAGCGACAACAGAATGTGCTATGCTAATCTCGGAAACTGATGAACTAGCTA GGCAAAAGAACAATGTATCATATCCATCCATAATGTAATAGTATCAAATTATATGTTTGGATCAACTTATTTTTTCTCAT AATCAAGTCTAGCACAGAAAAACTGATCAGAGAAGCTTATCCGCAAAATTGATTTAAGCTTTAGAATTAAGTATGGAGAA GGAATTCCAAACATTCTAAAGCTCTACTATTGAAACCTGGGTTGAAGTTTGAAGAGAATATGGTTGGCAGGAGACAAAAA TCCAGTTACAGATAATGGTGTTTGGTTCAATAACAATATTAGTCACCACGATCTCAGGCCGTCTTTCTGATTCTGCCTAC GTCATTTTCATTTTCAACGCACAATCCCGCGTCTCACAATGAATTAACAGGTGTCATTCTCTTTCTTTATCTCCTCTCTC ATTCAGCAAAACTTGTACTATTTTTTCTCTCTCACATGCGGGTGGATTTTTTATAATGGTAATCCGTGTGGGAGAATAAT GTTTCTATTCTAATTTCTAAACCAGTCCTCTTCTTTGAGGCTTCAGTGGTCCCATAAAGAACCACATTTGAAGGCATTGA GACTTTGTCAGATGCTAATTATTGGCAATTATGGATTCAGATATTTTCATATTACATTATTCCCATTTCCATTTGGTAGA GAGTATAAAACTATAAATAGAACTGATCAGACTTTTCCATTCAAGCATTCAAACAACTGGAGCTTCTTCTACAGTAACTA ACTAACACTCTCTAATACTAATAGGTGTCCAAAGAAAGAAAATGGAGTCTGCTGTGCATATTTCTGAAGAATGGAGTTCT CTTAGTGGGGCTTACACGGCTGAGGAAGCTGACTTTATGCACCAGTTGCTTGGTAACTGTGCAGTCCCACAGCAGTTCTA TGAACCTGCAAATACTAATTATATGTGTTTTTTGCAAGGGAGTAGTAGCTCAAGTGCTGATAATAATAATATCTTTCCCA CTACAAGTGGTGTCAACTGCACCAATAGTTCAGTTACAAATTTTGGCTATATGCCAATGTGTTTTTCAGCCGGCGATTCC AAATTCAGCCCACATAGAGTACAAGGGAATGACAGCAAACATCTAAATGAAAACATTGATGACGAGTTAGGCCAAGACAC AGGGACAGTGGTTCTTGCTGACAAGAATTTGCAAACACACAAGAAACGTGAAATACTAGTTTCTGAACCAGAAGAGGATA AAATCAGAAGCCGGCCAAAATCAGGAAAAAGATGTAGGAGCTCAAATGAGGTAAAATCATTCTAAATATTTCACTTGCTC CTTTCTTCCACATGTTATGGCATGTGTTTCATGTTGTGAAATTCTCCTCATGATTTGATTTAACAGGTCCCAAAGAACAA TAGGAATGTTAAATCTAAGAAGAATACAAGGTCTGCTTCTATAAGTACTGAAGAGGATATAAGTCCTGGTCCTCAGGATC AGACTTGCTGCTCAGATGATGACTCCAATGCTTCTCTGGAGCAACGCGGAGGGTCATCTTCAAGTTTGAGTCTGAATGAT TCTTCAGCTATGAAGTTAAGTAGCAAATCAACATCTAGTAGAGGTCCTGCTACTGATCCACAGAGCGTCTATGCAAGAGT AAGTCCTTTGTGAAGGGTATATGATTTAGTTATTGTTGCTAGTTTCTAGTAATTTGTGATATTGTGTTGTTGTTCATGTA GCCATGTGAGGGGTTAACTCTAACGAGGTTTTCCTTTTGCATTGTACAGAGAAGAAGAGAAAGAATAAATGAAAGGCTAA GAATCCTACAAAGCCTTGTCCCCAATGGAACTAAGGTAATTTTCTCTACCCAATGTCAATAGTCACACTGTTGTTAGACA ACTGGTTAGGATGCTAAAATTCTGAAGTCTGCTTCCTTGGTGAACTGCAGGTAGATATCAGCACCATGCTTGAGGAAGCT GTCCAATACGTGAAGTTTTTACAGCTTCAAATTAAAGTAACAACATGACTTACTCTGCTAAATTTTAGCTCAGTGCAACT AATTTCTTACATATTTGGAAAGACAATGGCTGATCAATTTTTTCTCCTATACCAATTTGACAGCTTCTAAGCTCTGACGA TATGTGGATGTACGCTCCCATTGCTTACAATGGAATGAACATTGGACTGGAACTTAACCTCCCCCTAATCAAAGAATCAA AGGATATGCATATCATTGCAGCAAACAAGTCTCCAGCAGTTTAAGAGATTGGGATGCCATTTTGTGATGATTTTTGTTGT GTTAAGTGTTAACTATATATATCTAAACAATGTTGAATAGTGAAGGAGTGTGCTAAAAAGGAAAACTATAAGAGCATGTT TGTTTTACAGTGTTAAATTTAATTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGATTTTAAATGTCTACTCTTTTA ATTTCCATTTATATATTTTACTTAGTAAAAATGTATTTACCACTTAGTAAAATATAACCATATCTTAAAATAAGAACAAG GGCAATCCTCCTTTGAACTAGTAATTATTACGGAGTAGAGTATAAAGCCTGTTACATAAACCAGGAAGACACTATTGGGT TGCTCTGATGGATTTAATGCTTAATTATCGTTAGTGTCACAAATGTTGAGGCTGCAAGGTTGTGAATCTGATGTAAGACA GCATCATAATTCATCACTAATGCTTAACATTGACATCTTGAACGCAATTTCACACACCCCTCACGAAGTAAGTGGCAGAA ATGGAAGAACATACCACAGAGCAATGGAATAACATCGAGATGTTAGCTCGCTTGTACTACAGCACCGTAAGTAACAATAG TGTGCCCCTTCTAAGCATAATGTTACATTTCCAACAACCCCCCAAAGAAAAAGGAAAAAAAAAACAAGATATCATTCACA CTATCAATCTTTTATTGTCCATATGATACATCAGACTAAATTCAATGGTCAGAATTCTAAATGGCTGAAAAAGGACACAT GAAAAGCCACACCCATGCAGTAAGCCATGAAATCCCAAGAGACTGACCTGTTTTTCCTTTCATGCCCTTTGATTATTGAC GTGATTTGGAACTTCTGCTTGGCTGTCCAAGGGCATATATTGTGCCATGATTGCTCTGATTTCGGAATCCATGTATTGCT GCAAAACCATCAACGGAAGTACTGTTAAATTTTTATGCTATCAGACACAATGAAGTAAATTATCCTGAAACATCACTTGC GTCTTTATTTGAGTAATCTCTCGGTTATACAGGTCTGGAATGTTGGGCAACTCAGCATGCTATAATGCTAAAGAAATTTA GCATTTTGCATCCAATAACATCATCAAAATGAGAGAATGCAGCAGAGCTTACCCTTATTCTATACTTGTACACAAGGAAT GCCCCACCAGCAATCATTACTGAGCCAATTAAAATGACCCAAAAAGCAGCCAAAGAAGATCTTCCCCGACTCCCAGATTT ACCTGTAGATTATCCAGCAGGGGACATGAAAACAAGTGTTTTAACAAGAGTATTCAAATACAGGTGAAAGTAAAAAAGTA ACTCACTTATGCAAGTATCATAGTCCTTAATATAAAGAAGATCTCCAGTACAACTGCAGTTATAGCTGCCCCAAGTATCC TTGCAGCTACATTGGGGGCACTGACAAGCTTTCTTCTCTTTGCATTCATCAATGTCTGTAAAGATGAAACACAAGTAGTT CAATTTCCAATATTCTGTGTTTTTTTTCCAGTTACGTGGAAAACATTCACTTGGTATCATCAAGCTTCCAATGTTTGTTC AAACTCAAGGACTAAGAAGACATTGCAGCGCTGATGGTGGCAGGAAATTAAACAACAGGTAATACAAGTATAAAAGCCAA CATTTCCCTCACTGATACTGAGACTGCAATAAGTCTCTCCAATCAAACAAAATGAGAG
CDS sequence (LotjaGi2g1v0460200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTGCTGTGCATATTTCTGAAGAATGGAGTTCTCTTAGTGGGGCTTACACGGCTGAGGAAGCTGACTTTATGCA CCAGTTGCTTGGTAACTGTGCAGTCCCACAGCAGTTCTATGAACCTGCAAATACTAATTATATGTGTTTTTTGCAAGGGA GTAGTAGCTCAAGTGCTGATAATAATAATATCTTTCCCACTACAAGTGGTGTCAACTGCACCAATAGTTCAGTTACAAAT TTTGGCTATATGCCAATGTGTTTTTCAGCCGGCGATTCCAAATTCAGCCCACATAGAGTACAAGGGAATGACAGCAAACA TCTAAATGAAAACATTGATGACGAGTTAGGCCAAGACACAGGGACAGTGGTTCTTGCTGACAAGAATTTGCAAACACACA AGAAACGTGAAATACTAGTTTCTGAACCAGAAGAGGATAAAATCAGAAGCCGGCCAAAATCAGGAAAAAGATGTAGGAGC TCAAATGAGGTCCCAAAGAACAATAGGAATGTTAAATCTAAGAAGAATACAAGGTCTGCTTCTATAAGTACTGAAGAGGA TATAAGTCCTGGTCCTCAGGATCAGACTTGCTGCTCAGATGATGACTCCAATGCTTCTCTGGAGCAACGCGGAGGGTCAT CTTCAAGTTTGAGTCTGAATGATTCTTCAGCTATGAAGTTAAGTAGCAAATCAACATCTAGTAGAGGTCCTGCTACTGAT CCACAGAGCGTCTATGCAAGAAGAAGAAGAGAAAGAATAAATGAAAGGCTAAGAATCCTACAAAGCCTTGTCCCCAATGG AACTAAGGTAGATATCAGCACCATGCTTGAGGAAGCTGTCCAATACGTGAAGTTTTTACAGCTTCAAATTAAACTTCTAA GCTCTGACGATATGTGGATGTACGCTCCCATTGCTTACAATGGAATGAACATTGGACTGGAACTTAACCTCCCCCTAATC AAAGAATCAAAGGATATGCATATCATTGCAGCAAACAAGTCTCCAGCAGTTTAA
Protein sequence (LotjaGi2g1v0460200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESAVHISEEWSSLSGAYTAEEADFMHQLLGNCAVPQQFYEPANTNYMCFLQGSSSSSADNNNIFPTTSGVNCTNSSVTN FGYMPMCFSAGDSKFSPHRVQGNDSKHLNENIDDELGQDTGTVVLADKNLQTHKKREILVSEPEEDKIRSRPKSGKRCRS SNEVPKNNRNVKSKKNTRSASISTEEDISPGPQDQTCCSDDDSNASLEQRGGSSSSLSLNDSSAMKLSSKSTSSRGPATD PQSVYARRRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDMWMYAPIAYNGMNIGLELNLPLI KESKDMHIIAANKSPAV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 318 | 316 | 7.0E-97 | – | |
| PANTHER | 3 | 318 | 316 | 7.0E-97 | – | |
| MobiDBLite | 141 | 247 | 107 | - | – | |
| MobiDBLite | 141 | 163 | 23 | - | – | |
| MobiDBLite | 174 | 240 | 67 | - | – | |
| ProSiteProfiles | 237 | 286 | 50 | 15.421 | ||
| SUPERFAMILY | 237 | 303 | 67 | 1.83E-14 | ||
| Gene3D | 242 | 295 | 54 | 1.4E-11 | ||
| SMART | 243 | 292 | 50 | 1.9E-11 | ||
| Pfam | 247 | 287 | 41 | 2.5E-9 | ||
| CDD | 260 | 291 | 32 | 5.45737E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0460200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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