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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0001100 |
| Transcript ID | LotjaGi3g1v0001100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT3G21190.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|V7BY32|V7BY32_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0001100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:206926..211630) extracted from Lotus japonicus Gifu genome v1.2.
AATAGTAGTTTTTTACTTACATTACACCGACACTTGTCTGGTCTTGTCTCTCTCCATCATCTTCTTATTGTTGGTTTGTT CATGTGTTGGTGTTGAAATTGAACAAGATGTTGAAGTTGAAGTTGAATTCAAACCTTCAATTCAATTTAAGACAATTGTG AACCAGAGACAGGGAACACAGAAGATCCAACTTTGAAGAAGAAATGGGAGTAGATTTGAGGCAAGTGGTGGCTGGTGTGC TCACCCTCACAATGTTCGTCATGCTTGGAAATATGATCAAAACAGACCACTTTGATTCACTCCAAGTAAACACACTCCCC TCTCTTGCTTTTTAATTTTTTAGTTGATTTGAATTGATCAAATGAAAACCCTTTTTCTCTATATTGATCTCAAAGCTTGT AGATAAATTAGAAGATCCTTAGTTACAATACAATTACAAACTAGAACAACATTAATAAAACATGTAGACTAGTCACTTCA ATTGGTGTTCCTGATCTTCAAAATCAAGACTTTACAATTAGTTTATATGGTTTGTCCTTTTTACATTACAAGGAAAAGCT TCCAGGAACAATGGAGGATTCCAACTTTGAGACTGCAAAGTTTGATGCTACTCATGTAAGAAAGGATATAGGGCTTTGGA AGGGTGATACTGATTTGGATGACCTAAAACCGTGTTGGGTTAAGCCATCATCTGCTGGTAAGATTTGATTTCAGGACTGA TGACCTTATATCATAATTACAAGTCTTTCTTCTGTCTTTAATAATTCATATTTTGTCATGGCTGGCAGATGATGTAGAGC AGACTGAAGGGTTTGTTACTTTTGCATTAACCAATGGCCCGGAGTACCATATTTCTCAGGTAACTTATTCAATCATTGTG CTTAACTTAGTGAGGAGTTGCTTATGTTTTTCCTTTTGATAATGCCCACCTCTGTTCTAACAAATTTAGTGGTGTGAGAA AAGGAAAGACTATTTTATGACATGTTCTGGTCACCTTCCGCTACTGATGATTGTTATACTAAGATTTATAATATTTTGCT ATTCTGTGATGAGGATGCCTTTGTGGAACAGCAATATCTAAGAAGGAAGGGGACAGTAGATTAGATTTTTATTTTGCTTG TTTACAACTCTTTTTTTTATCCATAATTTGATTCAGATCTTTATCATATCATTCAACATATCTTTCCTAGTAATTACAAT CTTTATATTGGCTATTAATATTCAAGAAAAAATCTATCAATTGTTTTCTCTTAATTTCGTTAATTTTAGAAGGAGCTCAG TCAAGAGCCAGTCTGCCAGATTCACTATAGGTAATAAAATGGATTCTTCTGTGTCTAGGTCCTACTCTAAGACGTATAAG TGTATAACATTCTGTTCTTGTTATTTCTTTCCTTCATTATTTTGAGGTTATTGCCTCTTTCATTCATTATTCCCATTCCT TTCTTCCTTTCTCTATTCTTCTTAATAGATCTCATCTTATCACTAAATGCCCTGTTAAATGACTAAATTTTTATGTATTT ACCCAACCAAGAAATCTTTTCATGAGTTAGTAGATCATGCTGCATGTTATTATTTCATTTCCTTGTGCTTTTAATATATC AATCTAATTATCATCTAGAACTTAGCCTTTATGTCTAGTGTTGAGTTTGTTGCTTTCCAAGAGTGGTGAAGAATTGCTTT GCTTTGCCTGTTTTTCCCCGTCGTAGAGGCCTACTGCTACTAGTTGCTAACATCTATAATTGTTAGTTCTATATTCGTTA CCTCATAGCTTTAAATACTGTGAGACCCTGATAGAGACACCCACCTCAACATATGTAATTTCAATTATTATTTCCTATAT TGTCTAATAATCTGGCCATGCGTTGATCAGATAGAAAATGCGGTGATTGTTGCTAGAAATCTTGGGGCAACACTTGTAAT ACCTGAGATCAGAGGAAGCCAGCCTGGTGACAAGAGGTTAGCACTGAAATTCACTCCATGACCTCTACCTAGCCTAGTCT TAATTTTTTTTTTATGGTAATATAACTTTTTTTCCTTTCAAAATGAGTAGCTATAACATTATTGTTGTTTTTCTTTCTGT GTTAAATGTTCTTCTTCTTTTTGTGTCAGCAACCAAGATATATAAGCTAGTGATGTAAACAATGAGCTGAAATTGAGTTA GCTTTATTAATTTCTCAAGTGCTAAAGAAATATATATATATATATATATATATATTTTACTGCCTCTTTTTATTTCCAAT TAGTAGGGTCTAGAATTACTTTTAGAAACCAATCTTAGGATTTCACCTAACAACTTAAGCGTTTTGATTAGTTGGTCCTT CACATAAGTAATGCCAGTCTTTTTCAATTCATCTTTTCTCTGGATATCTGGCATTTTTTGTGTTGCCACTGTTGCTCTTA TGAAACATTATACTAGTCATGAAAGTAGCTATCACAGGGAAGAGAGAAGGTAGGTGGTTTGTTTTTGTGGTTTTTATCTG TCACGATTGCAATACCTGGCAAAAAAACTTTCTATTTGTTCTGTATTATTATACGCTTAGTAGCCGTGCTTCATTTTTCT GTCACACTTAGATAAACATTCGAACACAAGTGAGGCCAGAAGCCAGGGCGAGGCCAGGCCAAAATCCTTGGCCAAGTTGT AGATTAACAACTTTAAAACTGACTCAAGGCCTCCCATTAAACAAGGATCAATTTTCAACTTTGTTTTTTCAGGTCCCATT TTTTTGAAGCTTGCTTTGGATGTGTAGCTCAATTTGAGCATGCTTAAATGTAGATGGTACTGATGAATATATCAGGGTTG AACTCAATTTTGAATTCATTCTAATTTACTTTTGAGTGTAAAGCAGTACTAGTTTATAACAAATATAATTGGCATCCCAG GAACTTTGAGGATATTTATGATGTCGAGGTGTTCATGAAAAGCATGGAAGGAGTGGTCAGAGTGGTAAAGGATCTTCCTG GTCATAGATCAACACAGAATATTGCTGCTGTGAAAGTCCCTAATCGGGTTACAGAAGACTACATAGCTAAACATGTTGAG CCAATATATAGAACGAAGGGAAGCATAAGGCTTGCAACTTTCTTCCCTTCAATAAACATGAGAAAGGCAGGGAAAAAAGG TGACACTGATTCTGTTGCGTGCTTAGCAATGTTTGAAAGTTTAGAATTGCAGCCAGAAATGCATGAAGTGGTTGACTCAA TGGTTGAAAGACTAAGAACTTTAAGCAGAAATTCAAATGGCCAATTTATAGCTGTGGACTTGAGGGTTGAGATGTTGGAT AAGAAAGGCTGCCAAGGTAGTGATAATGATGCAGAGAAAAGCTGCTACAATGCACAAGATATTGCAGTATTTTTGAGGAA GATTGGTTTTGAGAAGGATACCACAGTTTATGTGACTGAATCAAGGTGGGATAGCAGCCTTGATGCTCTGAAGGATTTGT TCCCTAAAACTTATACAAAGGTGAGTTGTGTTTTTTCTTGATATACCTGTCTCAACTCTCTCTCTCTCTCTCTCTCTCTC TCTCACACACACACACACACACACACACACACTTGTTAAGTTGAGAACTGTTATCAACACTCCCATTTATTGGTTAAGAA AAGAGATTATTCAAGTTCTGCGTGTTTGGATCAGAGTTGGCACAATTGATTCTAGATAAAATTGATCTTGGCAAAATTGA CTATAGTAAGAGTGAGTTGAAAGTGCTTATCAAAAAAAAAAAAGAGTGAGTTGAAAGTGAAGTGATTTATGTTCAGATAC ATTTAAGAAAAAAGTGGTTTTGTAAGGTAATATTGTGGAGTCTAAATGTAAAATCTCATAATTGATTATGTTCAATGCAA AAACTACTTTCTCTAGCTTGTCTTAATTGACTTTGGGAATGAAATCAATTCTTCAAAATGACTCCCAAACATCTATATTG TCATCAAAATTGATTTTACTCTATTAGAGTCAATTATGAGGTTCCCCCGGGGAACCAAACACAGTGTTAAAGTGAGAGCT GTTAGCCGTTTTTTTTCAAGTTCTTACATTGAAATAGCCACAGAAAATTCTATAACATTTAAGCATTGTTTGCACTAGAC TTATAAAATCCTGGTTGCCTCTGGTGCAGGAAGCCATCATGCCTGCAGATAAGAAGACAAAGTTCTTAGATTCGAAAGAT TCTGAAATTGAGAAAGTGATTGACTTCTACTTAAGTTTCCAGAGTGACGTTTTCGTACCAGCAATTTCAGGTCTGTTCTA TGCGAATGTAGTTGGAAAGAGAATCGGTTCTGGAAAGACACAGATACTGGTTCCAGCTCATATTTCAGGTTCATCTGCTT CTGCCTCCAATTTCGTGTCCTCCTATGTTTCCAAGAAAAACCACTTTGCTTATTCTTGTTACTGTTAAGAATCTTGTACC AAAAGGTCATCCTTCCCCTGTTAGTTTATTTGTTCAACTTGATATGGTCTCGGGGTGTTCATTTTTTCATTAAGGGGTGT TCATTGGATTAGCGCGTATATAGGATTTTTTGTATAAATTTTTTTATTTGAGAATGATTCAAAATTTATGTGTAATTCAT TTTTATGTAAATGACTAATTTATTTTTAACATGATAGCTACTTATTAGCATACTCCTTATTTTTGTTTTCTTAAATAGTG TCTCAATGATGTTTGTGAAGTCAGGTTTCAAAATAACTTTTATGATCCTTAACTTAGATGATCAG
CDS sequence (LotjaGi3g1v0001100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTAGATTTGAGGCAAGTGGTGGCTGGTGTGCTCACCCTCACAATGTTCGTCATGCTTGGAAATATGATCAAAAC AGACCACTTTGATTCACTCCAAGAAAAGCTTCCAGGAACAATGGAGGATTCCAACTTTGAGACTGCAAAGTTTGATGCTA CTCATGTAAGAAAGGATATAGGGCTTTGGAAGGGTGATACTGATTTGGATGACCTAAAACCGTGTTGGGTTAAGCCATCA TCTGCTGATGATGTAGAGCAGACTGAAGGGTTTGTTACTTTTGCATTAACCAATGGCCCGGAGTACCATATTTCTCAGAT AGAAAATGCGGTGATTGTTGCTAGAAATCTTGGGGCAACACTTGTAATACCTGAGATCAGAGGAAGCCAGCCTGGTGACA AGAGGAACTTTGAGGATATTTATGATGTCGAGGTGTTCATGAAAAGCATGGAAGGAGTGGTCAGAGTGGTAAAGGATCTT CCTGGTCATAGATCAACACAGAATATTGCTGCTGTGAAAGTCCCTAATCGGGTTACAGAAGACTACATAGCTAAACATGT TGAGCCAATATATAGAACGAAGGGAAGCATAAGGCTTGCAACTTTCTTCCCTTCAATAAACATGAGAAAGGCAGGGAAAA AAGGTGACACTGATTCTGTTGCGTGCTTAGCAATGTTTGAAAGTTTAGAATTGCAGCCAGAAATGCATGAAGTGGTTGAC TCAATGGTTGAAAGACTAAGAACTTTAAGCAGAAATTCAAATGGCCAATTTATAGCTGTGGACTTGAGGGTTGAGATGTT GGATAAGAAAGGCTGCCAAGGTAGTGATAATGATGCAGAGAAAAGCTGCTACAATGCACAAGATATTGCAGTATTTTTGA GGAAGATTGGTTTTGAGAAGGATACCACAGTTTATGTGACTGAATCAAGGTGGGATAGCAGCCTTGATGCTCTGAAGGAT TTGTTCCCTAAAACTTATACAAAGGAAGCCATCATGCCTGCAGATAAGAAGACAAAGTTCTTAGATTCGAAAGATTCTGA AATTGAGAAAGTGATTGACTTCTACTTAAGTTTCCAGAGTGACGTTTTCGTACCAGCAATTTCAGGTCTGTTCTATGCGA ATGTAGTTGGAAAGAGAATCGGTTCTGGAAAGACACAGATACTGGTTCCAGCTCATATTTCAGGTTCATCTGCTTCTGCC TCCAATTTCGTGTCCTCCTATGTTTCCAAGAAAAACCACTTTGCTTATTCTTGTTACTGTTAA
Protein sequence (LotjaGi3g1v0001100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVDLRQVVAGVLTLTMFVMLGNMIKTDHFDSLQEKLPGTMEDSNFETAKFDATHVRKDIGLWKGDTDLDDLKPCWVKPS SADDVEQTEGFVTFALTNGPEYHISQIENAVIVARNLGATLVIPEIRGSQPGDKRNFEDIYDVEVFMKSMEGVVRVVKDL PGHRSTQNIAAVKVPNRVTEDYIAKHVEPIYRTKGSIRLATFFPSINMRKAGKKGDTDSVACLAMFESLELQPEMHEVVD SMVERLRTLSRNSNGQFIAVDLRVEMLDKKGCQGSDNDAEKSCYNAQDIAVFLRKIGFEKDTTVYVTESRWDSSLDALKD LFPKTYTKEAIMPADKKTKFLDSKDSEIEKVIDFYLSFQSDVFVPAISGLFYANVVGKRIGSGKTQILVPAHISGSSASA SNFVSSYVSKKNHFAYSCYC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 420 | 420 | 2.8E-181 | – | |
| PANTHER | 1 | 420 | 420 | 2.8E-181 | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| PIRSF | 1 | 287 | 287 | 3.7E-53 | ||
| Phobius | 7 | 25 | 19 | - | – | |
| Phobius | 26 | 420 | 395 | - | – | |
| CDD | 91 | 387 | 297 | 5.25148E-111 | ||
| Pfam | 105 | 379 | 275 | 2.7E-26 | ||
| PIRSF | 284 | 394 | 111 | 1.3E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0001100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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