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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0004500 |
| Transcript ID | LotjaGi3g1v0004500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase-like protein; TAIR: AT1G15950.1 cinnamoyl coa reductase 1; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|A0A0S3SF21|A0A0S3SF21_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0004500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:589120..594838) extracted from Lotus japonicus Gifu genome v1.2.
TGTTTTGTGACGTATGCGTGTGTAATAATAATTTATAATTTGAAATTAAAAATATGTGGGGTTAGGTAAACGTGGTTAGT GAGAGAGAGGTGGCTATAAAAAGTGATTTTCCCACTACCCCACGGACACCACTCTACACCAACTCTATCTCGATTATTCG TAGCCATACAACCATAACTAACGACAACATGCCAGCTGCTGCCGGCGAAACCATCTGTGTCACCGGCGCCGGCGGCTTCA TCGCCTCATGGATGGTCAAACTCCTCTTGCAGAAAGGCTACACTGTGCGAGGAACTGTCCGAAACCCCGATGATCCCAAA AATGGTCACCTGAGAGAGTTGGAAGGAGCATCTGACAGGCTTACTCTGATCAAGGTTGACCTCCTTGAACTCAACTCTGT CAGAGCTGCTGTTCACGGCTCTCATGGCGTCTTTCACACTGCCTCTCCCGTCACTGATAACCCCGTGAGTTGCTCCTTTG ATTTGTTCCGTTTCTAATTTGTTTGGTAACATAGAAAAATCAACCATTATTATTGGATTTTCATTGAAACAGAATTTAAT ATAGCAAAATCTTAATTCTCTAACATTGAAGCAGTGCAAACCACAACGAGACATCATAAAGTGTACTGAGACTAAAAAAC CATCACAAAAGTGAGGTGTTCAATAATGGTTTGCTTTGTTTTTGTATTTGTGTATTATTGCTGGAAGGAGAAGTATGTTC TTGTTGGTAGCTTGAATACGGTCATGCCGCATCATCGCCATTTGTTTATTTTGACGTTAAAACTAACATAAATGTGATTT TTACATACCTATCAATCAGAAACGTAAAACTTACCCTTTGTGTTTAACATGGATTTTGGATAAGCTAAATTTTGATACAT TAATTTTAATGCGGATCCATATTAAATTCAATAGAAATCATAGCATGTTTGAATTTCCATCAAAATTAATTAAATCCAAG TTAATCTGTTAAAATTATATTTCCCTGGTCCATATTAAAAAGCAGAGTAAATGATTTTCGTTTTGAAATCACTTTCACTT TTGTGTTTGGTCCTGAGGCCAAAACAAAGTGGGTCCTGCCACCAAACTTTACTTTTCTGAAAGATGTGATGTGGTCTGTT TACTTTGCCCCCACTACTACACCAGAAAAAGTTATCTTCTTTTGTTACTTTTTTGTGAATTAAGCGGTTTGTTGGAAAAT TTTGCAGGAAGAGATGGTGGAGCCGGCGGTGAATGGAGCCAAGAATGTGATCATAGCAGCTGCAGAAGCTAAGGTGCGGC GCGTGGTTTTCACCTCCTCAATTGGCGCCGTCTACATGGACCCTAAAAGGAGTGTAGATTCAGTGGTTGATGAGTCTTGT TGGAGTGATTTAGAGTTTTGCAAAGACACCAAGGCAAGTATTTTTATTTGCACCAACTCAATACACTACTACAAGTCTAC AACACTAATGCCAATTAATTTTAATGATGTCTTATTTAATTGCAAATGGTTGGTCTTTATACCCAAATTAACATGATAAT GAGGTGGATGTTATTATTGGTGTTTAAAAATGCGTGAATACTGAATAGTGGTTCTTGAAATTATTGAACGCCGACAAATT TGTCTCTGAAAGAAACAATTGTACGTGTGAAGTGGTGCTTAAATTGAACGTTTTATCCTACTACAAGGATTAACTTGACT AACAGTTTACATAATTAAAATATATTCTATGTCTCAGGCATGAATTTGCTATCCTCAAACACTGTCGCGACTAATTTAAT TATTTACTCGTTTAAATATTAGAATTGTTAAGTAAGTACTAAAATGTACGAGGAGATCCAAATATTAATTTCTTAAGGGT GCAATCTATCTTTCTTATGTACCAAAAAAAATTAAATAATAAAAAGTGAATTAGATCTTTTTTATGAATTATAATAAATG TGTTTTCATGTCTGAACACAATGTTTGGTGCAGAATTGGTATTGCTATGGGAAGGCTGTGGCTGAGCAAGCAGCATGGGA CACAGCAAAAGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCGGTTCTGGTTCTTGGACCATTACTCCAACCAACCATCA ATGCGAGCACGGTTCACATACTCAAGTACCTAACCGGTTCGGCTAAGACCTATGCAAATGCCACACAGGCTTATGCGGAT GTTAGGGATGTGGCGTTGGCACACATACTTGTTTATGAGAGGCCAGAAGCTTCTGGTCGATACATATGTTCTGAGTCTTC ACTGCACCGTGGAGAGCTTGTTGAGATTTTGGCCAAGCATTTCCCTGAGTACCCAATGCCTACCAAGTAAGTGACGGAAA TGCTAGCAATACCATTTTTCAACTCATTTTAAGTGGTTGGTTTATTTTTTTAAAAGAAAATCAACATAGTTTTAAAAAGG TGGTCAATTTATGAGTGAATATGTACAAACAATTGTTTTAGTCCACTTATAATAGGCGAAGTTTGAATATCGTTCCTCGT CAGGGTAAAGTTTGAATATAATCTCTAATGTACCTTAGTTTTGATCTTCACCGCAAAAATAGGACCTTAATTACCAGATG TACGGTGGTTCTGACATATCATACCATCTGCTTTAATGAGGAACCAAAATCAAACATCACATATTAATGGTCATAAGCGC TTATGGTCATAAGCGCTTATGACCATATTAATGGCCCCGTTTGGAAAAACAGCTTAATTAAGCACTTATGGTCATAAGCG CTTATGACATAAGCGCTTATTCATAAGCTATTTTTGAAAATTTATTGAAATAAATTAAAAATAAGTTGTATATAAGCATA AGCTGTTTTTCATAAGCTATCCTGAGTAGCTTATGAAAATAAGCTGAAAATAACTTATGGCAGGTCATAAGCTGTTTGCA TAAGCTCTCCCAAACACTGACATAAGAGCTTATGCTATCAGATAAGCTCAAATAAGCTCTTCCAAACTGGGCCTAAAGCT TAGTCAATTATAAGCTTGGTGTGAAATGAAAGAGTCTTCTTTTGTTCCTATGATAGGTTCATGAGCAATTAAGATAAGCC ACGAGTCGTTGAAAAATATGGTGGAATCTAGTTGGTGGACCACAACTTTAGAAATGGGTAAAGGGTTTTTGTGGTCAGAC AAGACTTGATGCCCACCTAAGATGTGATTATTAGCATTAGCAACTATCTATGATTTTCTTTAGCTAATTACATTCATTGA ATTTATTGGTTTTATTCTCTTCTGGCACATCATGCATGGCCACATTATGCAACAAATGTTTCTTTTATTTCTTTTTCTCT TTAAATGATCTGTTAACCGTCCATGATCAATAGTGAGAGTCAAACTACATTTGCAAATTTTGTAACCTACAAAGGTTGTT GGAGAATGACATGTGTATTTGTTGGTTAGACTTAGTCCCAGTTTGGGACATGATCTCTTGCACTCCTGTGCTGCCACTGT AAGTTTGGTAAAGAGTCATGGAATTTTGTTTACAAATCACAATTGTATTCAATATTATGGATTTTATTGAAGTTGGAAAA CTAATGGCATTTTAATACCTGGAATATACACATACTCCTGATTTTAGTTGTAGAATAAAAATGTGTGAATGTCAAACATT TTAATGAGGGTGTGAATAGAAAGGTTTGGGTAGCAGGTATACCAAATTTGACTTGTTTATGTGATCCATAGTCCACCTAA AAGATTGAAAGTGAAATTATACATGCCATGATTTTATATTGCAAAAATCAAGTGGAGCTTATGAATTATGAGTCCTTACC AAACTCAATATCCTTGTCAGGCTATGACCCATTCTGGTCTTTACCTACTACCTCTTCCACTAATATATGGGCCCGCTAAA TCTTTTTTATAGATATATCAACTTTTTTTATTGTAGAATATGTAACCCAACCACTACTTTCCGTACTCCTTTGACAAAAA AAAACCACTACTTTCCTTAATAAGATTTATATTAATGCATTTTTACTCGGAGAACTTGATTAGAACAAGGTTGCTCAATT ATTTTAATAATGAATTGGTCAAAGGTTCTTGTTTTTTCTGATGTTCTGTTTTAGTAATTAAAAAGCATTATCTTTATTAA AAAAAATGTATAAAATAATAAATATTGTTTTAACTGTTTTCCATACAAATCTTCCAAAAACATGAAATAAATTAGGTAAT ATTTTTATACTTCTAGTAAAAATGTAAATAATACAACTGCATTACCAAACTAATCAGATGCTAAAATATATTTAAAAAGA AGAGCTCAAATAAAAATGATATGACATTTTTTATAACCATTAAGTGAACATAAAAAAATTCTTAATTTTTCAATTGGTCT AAAATAGAAGTTAATCATACAAAACAAATAGACAACTAGCTCAGGCCATAAGAATGATACTTTGATGAGTAATTATTCAT TCATATCAACTTTTTTTCATTTCATTTCCACCTATTTTTTCTTTCTATCCTCTGCATTTTCTATTGCATGGTCTATCATA TCACTTATTTATCTTTCTTCTCTTCTTGTCTCACACTCTTAGTGTGAGTGGAATTAAAATGCAAAAACATTATTCTTACA TTTGATTTGACTTGAAGCTGACTTCATATTTTACACATGCAGGTGTAAAGATGAAAAGAATCCAAGAGCAAAACCGTACA TATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCACAGTTTATATGAGACCGTTAAGAGT CTGCAAGAGAAAGGTCACCTTACGATTCCTAAGCAAGAAGATTCTATTGCAGTGAAATCCTAAACAAGTTTGATTCAGAA CAAGAAAAAGCATTTTATAGCAATCTGGGATCTGGGGTCATGTTAAATTATGGGGAATGTTGCAGTTAGATGACAGTATT TGGATGTTGTAAGGACATCATGTGAGTTGTTGCAGTGTCTGTCCGTATTTAATACTAAAGGATTTCATTCCCCTCTATGA AATTTTCTTTTCCACAAATTGTTTCATTTTTTTTCCAATACACTCTTTCATATTTCAAATATCATATGCATAATGCAATA AACATCATCCTCTCTTGAACCCAATTTGTGGAGAAAAGGATATATTGGTAGAACTCCACAGTTAATGCTAAAAGTGTAAT GATGGAATATGAGAGATTAGCTGATTTTTCAACATGAGTGGGCGTTTCTCAAATAGATTTGGGTAGAGAGATTCTTTAAT TTGACTTGTGTGTGTAATGTGGAGTTTGTTGATTGCTATCATGTGAGATTAGTGTTCAACTTTTTGAAACTTATTCAAGG CTGCAATAAGCTCTGACAATTACTTGAAAGACAAGAAAGTTTCAATTTTGAGAAGTGCTTCCTAGTAGTACTACTAGGCT GAAGTAAGTGCTAGCCGCAAGTGCTGAATATAAAAGCCACTGTTTTGTGGACTTTTGAAGCATTTGTGGGTGGAGCTCAA CCAAACAGCCATGGAGTTAATTTCAAGAGTTCTAAACCTTCCCAATAAATATCCTTCCGTTTCCATGTTATATACTTGTG TTGTGATTGAGGTACTGTTTATATTTTTCTTATGGCGGTTTCCTTTCCTAACGTAAGTTCTCACAACTACATGAGCACTT GTATCGACCTTCAAGTTGACCAAAAGAACATTCACTTTAATGACACAAAGTGACAAAAATTGGCCCAAAGTACATTCAAA CTATTATGGAATGCACACCGACAAAAGTATAAACACACC
CDS sequence (LotjaGi3g1v0004500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGCTGCTGCCGGCGAAACCATCTGTGTCACCGGCGCCGGCGGCTTCATCGCCTCATGGATGGTCAAACTCCTCTT GCAGAAAGGCTACACTGTGCGAGGAACTGTCCGAAACCCCGATGATCCCAAAAATGGTCACCTGAGAGAGTTGGAAGGAG CATCTGACAGGCTTACTCTGATCAAGGTTGACCTCCTTGAACTCAACTCTGTCAGAGCTGCTGTTCACGGCTCTCATGGC GTCTTTCACACTGCCTCTCCCGTCACTGATAACCCCGAAGAGATGGTGGAGCCGGCGGTGAATGGAGCCAAGAATGTGAT CATAGCAGCTGCAGAAGCTAAGGTGCGGCGCGTGGTTTTCACCTCCTCAATTGGCGCCGTCTACATGGACCCTAAAAGGA GTGTAGATTCAGTGGTTGATGAGTCTTGTTGGAGTGATTTAGAGTTTTGCAAAGACACCAAGGCAAGTATTTTTATTTGC ACCAACTCAATACACTACTACAAGTCTACAACACTAATGCCAATTAATTTTAATGATGTCTTATTTAATTGCAAATGGTT GGTCTTTATACCCAAATTAACATGA
Protein sequence (LotjaGi3g1v0004500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPAAAGETICVTGAGGFIASWMVKLLLQKGYTVRGTVRNPDDPKNGHLRELEGASDRLTLIKVDLLELNSVRAAVHGSHG VFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPKRSVDSVVDESCWSDLEFCKDTKASIFIC TNSIHYYKSTTLMPINFNDVLFNCKWLVFIPKLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 173 | 173 | 2.3E-68 | – | |
| PANTHER | 4 | 155 | 152 | 1.6E-84 | – | |
| PANTHER | 4 | 155 | 152 | 1.6E-84 | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| SUPERFAMILY | 5 | 167 | 163 | 9.75E-40 | ||
| Pfam | 9 | 133 | 125 | 1.1E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0004500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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