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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0004500 |
| Transcript ID | LotjaGi3g1v0004500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase; TAIR: AT1G15950.1 cinnamoyl coa reductase 1; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|A0A0R0HCJ1|A0A0R0HCJ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0004500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:589362..594750) extracted from Lotus japonicus Gifu genome v1.2.
GGTGGCTATAAAAAGTGATTTTCCCACTACCCCACGGACACCACTCTACACCAACTCTATCTCGATTATTCGTAGCCATA CAACCATAACTAACGACAACATGCCAGCTGCTGCCGGCGAAACCATCTGTGTCACCGGCGCCGGCGGCTTCATCGCCTCA TGGATGGTCAAACTCCTCTTGCAGAAAGGCTACACTGTGCGAGGAACTGTCCGAAACCCCGATGATCCCAAAAATGGTCA CCTGAGAGAGTTGGAAGGAGCATCTGACAGGCTTACTCTGATCAAGGTTGACCTCCTTGAACTCAACTCTGTCAGAGCTG CTGTTCACGGCTCTCATGGCGTCTTTCACACTGCCTCTCCCGTCACTGATAACCCCGTGAGTTGCTCCTTTGATTTGTTC CGTTTCTAATTTGTTTGGTAACATAGAAAAATCAACCATTATTATTGGATTTTCATTGAAACAGAATTTAATATAGCAAA ATCTTAATTCTCTAACATTGAAGCAGTGCAAACCACAACGAGACATCATAAAGTGTACTGAGACTAAAAAACCATCACAA AAGTGAGGTGTTCAATAATGGTTTGCTTTGTTTTTGTATTTGTGTATTATTGCTGGAAGGAGAAGTATGTTCTTGTTGGT AGCTTGAATACGGTCATGCCGCATCATCGCCATTTGTTTATTTTGACGTTAAAACTAACATAAATGTGATTTTTACATAC CTATCAATCAGAAACGTAAAACTTACCCTTTGTGTTTAACATGGATTTTGGATAAGCTAAATTTTGATACATTAATTTTA ATGCGGATCCATATTAAATTCAATAGAAATCATAGCATGTTTGAATTTCCATCAAAATTAATTAAATCCAAGTTAATCTG TTAAAATTATATTTCCCTGGTCCATATTAAAAAGCAGAGTAAATGATTTTCGTTTTGAAATCACTTTCACTTTTGTGTTT GGTCCTGAGGCCAAAACAAAGTGGGTCCTGCCACCAAACTTTACTTTTCTGAAAGATGTGATGTGGTCTGTTTACTTTGC CCCCACTACTACACCAGAAAAAGTTATCTTCTTTTGTTACTTTTTTGTGAATTAAGCGGTTTGTTGGAAAATTTTGCAGG AAGAGATGGTGGAGCCGGCGGTGAATGGAGCCAAGAATGTGATCATAGCAGCTGCAGAAGCTAAGGTGCGGCGCGTGGTT TTCACCTCCTCAATTGGCGCCGTCTACATGGACCCTAAAAGGAGTGTAGATTCAGTGGTTGATGAGTCTTGTTGGAGTGA TTTAGAGTTTTGCAAAGACACCAAGGCAAGTATTTTTATTTGCACCAACTCAATACACTACTACAAGTCTACAACACTAA TGCCAATTAATTTTAATGATGTCTTATTTAATTGCAAATGGTTGGTCTTTATACCCAAATTAACATGATAATGAGGTGGA TGTTATTATTGGTGTTTAAAAATGCGTGAATACTGAATAGTGGTTCTTGAAATTATTGAACGCCGACAAATTTGTCTCTG AAAGAAACAATTGTACGTGTGAAGTGGTGCTTAAATTGAACGTTTTATCCTACTACAAGGATTAACTTGACTAACAGTTT ACATAATTAAAATATATTCTATGTCTCAGGCATGAATTTGCTATCCTCAAACACTGTCGCGACTAATTTAATTATTTACT CGTTTAAATATTAGAATTGTTAAGTAAGTACTAAAATGTACGAGGAGATCCAAATATTAATTTCTTAAGGGTGCAATCTA TCTTTCTTATGTACCAAAAAAAATTAAATAATAAAAAGTGAATTAGATCTTTTTTATGAATTATAATAAATGTGTTTTCA TGTCTGAACACAATGTTTGGTGCAGAATTGGTATTGCTATGGGAAGGCTGTGGCTGAGCAAGCAGCATGGGACACAGCAA AAGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCGGTTCTGGTTCTTGGACCATTACTCCAACCAACCATCAATGCGAGC ACGGTTCACATACTCAAGTACCTAACCGGTTCGGCTAAGACCTATGCAAATGCCACACAGGCTTATGCGGATGTTAGGGA TGTGGCGTTGGCACACATACTTGTTTATGAGAGGCCAGAAGCTTCTGGTCGATACATATGTTCTGAGTCTTCACTGCACC GTGGAGAGCTTGTTGAGATTTTGGCCAAGCATTTCCCTGAGTACCCAATGCCTACCAAGTAAGTGACGGAAATGCTAGCA ATACCATTTTTCAACTCATTTTAAGTGGTTGGTTTATTTTTTTAAAAGAAAATCAACATAGTTTTAAAAAGGTGGTCAAT TTATGAGTGAATATGTACAAACAATTGTTTTAGTCCACTTATAATAGGCGAAGTTTGAATATCGTTCCTCGTCAGGGTAA AGTTTGAATATAATCTCTAATGTACCTTAGTTTTGATCTTCACCGCAAAAATAGGACCTTAATTACCAGATGTACGGTGG TTCTGACATATCATACCATCTGCTTTAATGAGGAACCAAAATCAAACATCACATATTAATGGTCATAAGCGCTTATGGTC ATAAGCGCTTATGACCATATTAATGGCCCCGTTTGGAAAAACAGCTTAATTAAGCACTTATGGTCATAAGCGCTTATGAC ATAAGCGCTTATTCATAAGCTATTTTTGAAAATTTATTGAAATAAATTAAAAATAAGTTGTATATAAGCATAAGCTGTTT TTCATAAGCTATCCTGAGTAGCTTATGAAAATAAGCTGAAAATAACTTATGGCAGGTCATAAGCTGTTTGCATAAGCTCT CCCAAACACTGACATAAGAGCTTATGCTATCAGATAAGCTCAAATAAGCTCTTCCAAACTGGGCCTAAAGCTTAGTCAAT TATAAGCTTGGTGTGAAATGAAAGAGTCTTCTTTTGTTCCTATGATAGGTTCATGAGCAATTAAGATAAGCCACGAGTCG TTGAAAAATATGGTGGAATCTAGTTGGTGGACCACAACTTTAGAAATGGGTAAAGGGTTTTTGTGGTCAGACAAGACTTG ATGCCCACCTAAGATGTGATTATTAGCATTAGCAACTATCTATGATTTTCTTTAGCTAATTACATTCATTGAATTTATTG GTTTTATTCTCTTCTGGCACATCATGCATGGCCACATTATGCAACAAATGTTTCTTTTATTTCTTTTTCTCTTTAAATGA TCTGTTAACCGTCCATGATCAATAGTGAGAGTCAAACTACATTTGCAAATTTTGTAACCTACAAAGGTTGTTGGAGAATG ACATGTGTATTTGTTGGTTAGACTTAGTCCCAGTTTGGGACATGATCTCTTGCACTCCTGTGCTGCCACTGTAAGTTTGG TAAAGAGTCATGGAATTTTGTTTACAAATCACAATTGTATTCAATATTATGGATTTTATTGAAGTTGGAAAACTAATGGC ATTTTAATACCTGGAATATACACATACTCCTGATTTTAGTTGTAGAATAAAAATGTGTGAATGTCAAACATTTTAATGAG GGTGTGAATAGAAAGGTTTGGGTAGCAGGTATACCAAATTTGACTTGTTTATGTGATCCATAGTCCACCTAAAAGATTGA AAGTGAAATTATACATGCCATGATTTTATATTGCAAAAATCAAGTGGAGCTTATGAATTATGAGTCCTTACCAAACTCAA TATCCTTGTCAGGCTATGACCCATTCTGGTCTTTACCTACTACCTCTTCCACTAATATATGGGCCCGCTAAATCTTTTTT ATAGATATATCAACTTTTTTTATTGTAGAATATGTAACCCAACCACTACTTTCCGTACTCCTTTGACAAAAAAAAACCAC TACTTTCCTTAATAAGATTTATATTAATGCATTTTTACTCGGAGAACTTGATTAGAACAAGGTTGCTCAATTATTTTAAT AATGAATTGGTCAAAGGTTCTTGTTTTTTCTGATGTTCTGTTTTAGTAATTAAAAAGCATTATCTTTATTAAAAAAAATG TATAAAATAATAAATATTGTTTTAACTGTTTTCCATACAAATCTTCCAAAAACATGAAATAAATTAGGTAATATTTTTAT ACTTCTAGTAAAAATGTAAATAATACAACTGCATTACCAAACTAATCAGATGCTAAAATATATTTAAAAAGAAGAGCTCA AATAAAAATGATATGACATTTTTTATAACCATTAAGTGAACATAAAAAAATTCTTAATTTTTCAATTGGTCTAAAATAGA AGTTAATCATACAAAACAAATAGACAACTAGCTCAGGCCATAAGAATGATACTTTGATGAGTAATTATTCATTCATATCA ACTTTTTTTCATTTCATTTCCACCTATTTTTTCTTTCTATCCTCTGCATTTTCTATTGCATGGTCTATCATATCACTTAT TTATCTTTCTTCTCTTCTTGTCTCACACTCTTAGTGTGAGTGGAATTAAAATGCAAAAACATTATTCTTACATTTGATTT GACTTGAAGCTGACTTCATATTTTACACATGCAGGTGTAAAGATGAAAAGAATCCAAGAGCAAAACCGTACATATTTTCA AATCAAAAGCTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCACAGTTTATATGAGACCGTTAAGAGTCTGCAAGA GAAAGGTCACCTTACGATTCCTAAGCAAGAAGATTCTATTGCAGTGAAATCCTAAACAAGTTTGATTCAGAACAAGAAAA AGCATTTTATAGCAATCTGGGATCTGGGGTCATGTTAAATTATGGGGAATGTTGCAGTTAGATGACAGTATTTGGATGTT GTAAGGACATCATGTGAGTTGTTGCAGTGTCTGTCCGTATTTAATACTAAAGGATTTCATTCCCCTCTATGAAATTTTCT TTTCCACAAATTGTTTCATTTTTTTTCCAATACACTCTTTCATATTTCAAATATCATATGCATAATGCAATAAACATCAT CCTCTCTTGAACCCAATTTGTGGAGAAAAGGATATATTGGTAGAACTCCACAGTTAATGCTAAAAGTGTAATGATGGAAT ATGAGAGATTAGCTGATTTTTCAACATGAGTGGGCGTTTCTCAAATAGATTTGGGTAGAGAGATTCTTTAATTTGACTTG TGTGTGTAATGTGGAGTTTGTTGATTGCTATCATGTGAGATTAGTGTTCAACTTTTTGAAACTTATTCAAGGCTGCAATA AGCTCTGACAATTACTTGAAAGACAAGAAAGTTTCAATTTTGAGAAGTGCTTCCTAGTAGTACTACTAGGCTGAAGTAAG TGCTAGCCGCAAGTGCTGAATATAAAAGCCACTGTTTTGTGGACTTTTGAAGCATTTGTGGGTGGAGCTCAACCAAACAG CCATGGAGTTAATTTCAAGAGTTCTAAAC
CDS sequence (LotjaGi3g1v0004500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGCTGCTGCCGGCGAAACCATCTGTGTCACCGGCGCCGGCGGCTTCATCGCCTCATGGATGGTCAAACTCCTCTT GCAGAAAGGCTACACTGTGCGAGGAACTGTCCGAAACCCCGATGATCCCAAAAATGGTCACCTGAGAGAGTTGGAAGGAG CATCTGACAGGCTTACTCTGATCAAGGTTGACCTCCTTGAACTCAACTCTGTCAGAGCTGCTGTTCACGGCTCTCATGGC GTCTTTCACACTGCCTCTCCCGTCACTGATAACCCCGAAGAGATGGTGGAGCCGGCGGTGAATGGAGCCAAGAATGTGAT CATAGCAGCTGCAGAAGCTAAGGTGCGGCGCGTGGTTTTCACCTCCTCAATTGGCGCCGTCTACATGGACCCTAAAAGGA GTGTAGATTCAGTGGTTGATGAGTCTTGTTGGAGTGATTTAGAGTTTTGCAAAGACACCAAGAATTGGTATTGCTATGGG AAGGCTGTGGCTGAGCAAGCAGCATGGGACACAGCAAAAGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCGGTTCTGGT TCTTGGACCATTACTCCAACCAACCATCAATGCGAGCACGGTTCACATACTCAAGTACCTAACCGGTTCGGCTAAGACCT ATGCAAATGCCACACAGGCTTATGCGGATGTTAGGGATGTGGCGTTGGCACACATACTTGTTTATGAGAGGCCAGAAGCT TCTGGTCGATACATATGTTCTGAGTCTTCACTGCACCGTGGAGAGCTTGTTGAGATTTTGGCCAAGCATTTCCCTGAGTA CCCAATGCCTACCAAGTGTAAAGATGAAAAGAATCCAAGAGCAAAACCGTACATATTTTCAAATCAAAAGCTGAAAGATT TGGGATTGGAATTCACTCCAGTGAGTCACAGTTTATATGAGACCGTTAAGAGTCTGCAAGAGAAAGGTCACCTTACGATT CCTAAGCAAGAAGATTCTATTGCAGTGAAATCCTAA
Protein sequence (LotjaGi3g1v0004500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPAAAGETICVTGAGGFIASWMVKLLLQKGYTVRGTVRNPDDPKNGHLRELEGASDRLTLIKVDLLELNSVRAAVHGSHG VFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPKRSVDSVVDESCWSDLEFCKDTKNWYCYG KAVAEQAAWDTAKEKGVDLVVVNPVLVLGPLLQPTINASTVHILKYLTGSAKTYANATQAYADVRDVALAHILVYERPEA SGRYICSESSLHRGELVEILAKHFPEYPMPTKCKDEKNPRAKPYIFSNQKLKDLGLEFTPVSHSLYETVKSLQEKGHLTI PKQEDSIAVKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 331 | 331 | 5.9E-142 | – | |
| PANTHER | 5 | 322 | 318 | 8.6E-190 | – | |
| PANTHER | 5 | 322 | 318 | 8.6E-190 | – | |
| SUPERFAMILY | 5 | 313 | 309 | 9.09E-67 | ||
| Pfam | 9 | 241 | 233 | 1.2E-24 | ||
| CDD | 10 | 296 | 287 | 1.99563E-153 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0004500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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