Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0009000 |
| Transcript ID | LotjaGi3g1v0009000.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF4050 family protein; TAIR: AT5G25360.3 hypothetical protein; Swiss-Prot: sp|Q6FT96|MDV1_CANGA Mitochondrial division protein 1; TrEMBL-Plants: tr|I3SSQ5|I3SSQ5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0009000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1036568..1041425) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAGAATAATTGTTTTGTTTAACAAAGGGACCAAAAAGATAATTAACCTTATTGTTGAAGACAGAGTAATTAAATTA AATTAATAAAGAAATAGTCAATCCACCGTCAACATATATATTATTTGCCGGAAAAGAAGAAAGAAACAGAATCCAAAACA AACACCACCCTTCTCAGAAGTGATGCTCTCGATTTCAACTTAGGTAAAAAGAGACAGAACAGGTTCCTTCTCATCCATGT TATTTCCATTTCTAATCAACTCTATCTGTTCTTCACTTCGATATATTTTTCTAATTTATTCTCTGTTTATTTTATTTTAT TTTGAATTTTCAGGATTGGTCTCTGAATTTTTCTTCCAGGAATCGCAGTTTGGCTTCTTCAATTGCCCATAAATTCATTG TAACAGATCTGAATAAGGTTTTTGCGGTATTTCAGTCACTGCATGCATATGGGGTATGTGTTCTGAATCCAGCTGAAACT AAATCAAAATAGTCCCTTTTTCAGTTTTACTTGCAATTTTCACTTTTATCTTTTGTGGGTATCAATGATTTTCTTCCAAT TCACCGACAAAGAGAAATCATGTAGTGGTATGTGTATGACTCCAATGATTGATCATTCTAGGTTGGAAGCTGGGGATAAT TTTTGTTTTCTTTTTTGTTTATATGGTTGTTTCGAAAAAATTATCAAAAGGGACTATCACTAATTGGTGAGTTGGAGAAC TTGTACTTTTTCCTCTCTTAATAATGAAATCAGAAACAGAATCAAAATCAGGAAGCTGCGAATTTATAGTTGTTTATGTG CTTCGATTTCTCATTTATCTTATTGAAGTGGTGCTGTGGTTCGAACACTCGTGGTAAAGGCAAGGAGCAAGGTGTTTCTC TGTTTTCTTTTGGTCCTAGTGAGCTTATATTTTCTGATCACCATCGTAAAGGCGTCGAAGTGCATATCCGTTTTATGGAA GTTGTCTGTCATAACTCAACTACTATTTGTTAAAAAACATCACTGATTAGATTATAGTTTTACGGATGTGAACCCGATGA TCTAATTCTGTGCTTAAGGATCAAAATAGGCAATATACCTACACTTGAAGGAGAACACGTCGGTGTTTATGATTTTCTTT TAACTGGTTACTAGAAAATGCCGTCTTAGAATCATTAGATGGTTGCTACTTGCTATTCCTCCATTTGACCTTAATGTAGA TAGCTGTGAAAACGCTGGTATTGTGACACTTTTAAACTATGTTATCCGATTTATCATTTATGTAGACTCAGATGTAAGAA CTTTAATCTGGAATGCAGAATAGGGCCTTGAATAATTAGTTTGCTTGTCTTTACATACTAATATAATCATACTGATAGGA AACCTAGTTGTTTGATACTTTGATATTTTTTTGGATATACTCGTAATTTGCGTTTTCTATTACTTTATCATGAGAGTAAT TCTGCTGGAACCATTTCTTTTGTTAAAAAAGTATAATTATAGGGACTGAACCAAGTTGCCACTATTAAACTGTGGTATTT GAATTTGTGGAGGCTCTTCTAGACAATCATATAATTGTATTGTGATGTATAACAGAATCTAATGTGATTGTAACAGAGCA GTGGTTGTCTTGGACTCCATAAAAAGCCCACGCTAATTGCTACAGCAGATGTGCCATCAAAACGATTGACACAACACAAT AAGGCGGTGAAGAAAGCTAGCACATCAGAGGATTTCTGGACCACCAGCACACATGATATGGACAACAGCGCTGTTCAGTC ACAGGGAAGCATCTCATCAACCAGTGTAACCAACCTACCTGCTGATCCTCATGCTGGTTCTTCCAACCCAACTGAATTTG TAAACCATGGTACCATATGTCGTTGCTTTTAGCTTCCAGATATTTTACTGTATAGACATGATAATTGAATATGTATTTTA GTCAAGAAATGTTTGAAAGAAAAAAGGAATATTATGGGTTTGCATGATGAAAACTGAAAGCACCTATTGCCATTGGTTGG ATTTATTTTTACTTGCTCGTTAACCCGTGGGTTTCATTTATGGGCTGTTGGCTGACTATTGTGGGTGCCCAGTGCAAGAT GTATCTTGTTGCAAGTTGCTTGTTGAATGCTGAAGCAATATATGAAATGTGGTTTGAGTGTAACTTTCATCTACTCTTCC CTACTTCATCAAGATGCCTTGGTTGGTAACTTCTTGGGATACTGGATTGGATTCTTACATGATAGACTGTTATATTTAAT TTTCCAATAATATTTTTTTAGGTTTGAAGACAACAGTTCATATACCTTTCTTTTGATTCGTGCAGTGTTCATTTGTGCAA CTTTGTTAATTGTCACTTATTATTTTCTTTTGCTATATGCTTTTCTCAAGTTGTCTTTCTGAGCTGATCTGATATGGATA AGTTACCTTTCATATCACTGAATTGGCTTCATGGAAATTTAGTCAGTTTTTCATTTGTCTCCCTATTTATATGTTGTTGT CTTTCTGCCTGTATTAAATTGTAGTAAATGAGATTTTGGAAGATGTGGAATCGTTGGTCATTTTACTTGAAAGTTTTCTC ACAGAAATTGGCAAAGATAGGAAGGGAAAAGTTATCAACAAAGGTTTTTTTTTTGGCAGGTCTAACTCTTTGGAATCAGA CACGGCAACGTTGGATAGGAAATAATAAAAGGCCTGAGAAACAAACAGAACAATCGCGTGAACCAAAATTGAGGTACACT ACATTGTTAGATTAGTTTTACTAGCAGTATGTTTTTAGTAAGCTAAATTTAATCAATGGCAAAAGAAGCTGAGGACAACT CCCCCATATGAGAACCAGAAAAAGCAAGCCCAACCAACAGCCGTAGCAAGGCCCCCAACACCAACAAAAGAACAGACCAA AAAACACCTTACAAAACCTAAAAAAAGAAACATGAAAACAACCAAGACAAAAAACCCAAAAGCCTCCAACAACGCACACA CCACCACTAACCCCACAAACAAAAAAGAAAAGACCAAGATCAATCTCAAGAAGACCAAGCCTCCCTCATCTCCTCAAGTC CCTGAATAGCTTCCTCATCGGTACTGTCATATTCTAGGCCCAAAAGGTCTTACTAGCAGTATTGATTTATCAATTTTGTT ATTCTACTTTTATTCATTGGGTGAGTGTGGTGATGCTGTATAGCACCCTTTTGGTTTCATTCCTTCTTAGATCCACCATG CCTTCAAATTTTGAGAATGCATGAAGTCTTCACAGATGTTTTCTTGGAATCTGATAACGTGTTAACTTTGTAAAAACTTC AGTCAGTTGGAACCTTTATGAAAATTCTCGAATTTCTACTGTTTACATATGTTGAAGTTGTGTTAGGATCACTAGAAAAT TGCTAATTCGTCATAGTAGCCCTGTATTCTTGTCTTTAATTTTTAATACTTATACAAGTTGACAAGGTCAATTCCAAATT TGTCTTTTGCTGATGAAAATATGTAATGATTCGGCAGTTGGAACGCAACGTATGATAGTTTACTGGCGAGCAACAAGCCA TTCCCTCAGCCTATTCCCCTTGCGGTAAGCATCTACTTCTGAGCCACCTTGCAGTTTAAGTGCAATAACGGGTTTATCTG ACATGGCTTGTATGTATCAATATTGTTAGGAAATGGTAGATTTTCTAGTGGATATCTGGGAACAAGAGGGCTTGTATGAC TGAACCATAAAGATTGAACGAGTGTTGTATCTATGAAATAATTTTAGTTCTTTATTCTGAAGAGGAAATTGGGCATTCTA CAGTTTGTGTATCTATTGTAACATTTAAGATGAGGAGGAATTTTCTCCACAGGCCTTTGGCATAATTGTATTATAATTTC ATTTAATTAATGGCACTGGCTCTGAAGAGGCTAGGTTTACAGAAACATTATCCTTTTTTTGCATCAATAGCCACAACATG TATTTGCTTCTCCTTTCCTTAATGTTTGAACTTCGAATTGACCTGTCTCCTGTGTCGAATCTTTGTATGAATTACTTTAA GAAGAATAATCATGAATTTTTTTTAATGGAAAATAGCCATTTACCATTGATATCATATTCCTGGCTTTCTGTTTTTACAA TCAAATGATGCAGTTAGAAGTCAAATTGCAAAAATCTGTGATAGGATCATATTTTGGCTGCGTGCGTGTTGCAATCGTAG TAATCATCAAGTGAGATAAAGATTGAGAGCTCCTTATTACTGTTTTCCACTTCAGATAATTGTGCAATCTAAAGAATTCA GAGTCAAGCTCCTTATTACTTAAGTTGTATGAATTCCTTGTATAATCATCAATATCAGCTAAGCCAGCCAATCCTCTCAC TCATGGGAGGTTTTCATTTTAATTAGAAGACACTTGATCTTCAAGGTCAGCAAAAGGGTTTGGTTTTGAAAAGATTGCAG CAAAGAGTTTTTGGTTTCAGTTCCATAATGGGTCAGAGCCTTTTAATTGCGGTTAAGCTGCATTTTGTAGTCGTGATACC GATACCGATGTGGGGACTATAAATAATACTCCCTTTGTTTTTGCCTTGTGGTGCTAAGCAATGTTAAAGGATATTGTACT TAAAGGATGTTGAACTTAATGTAACCATTTCTAGGATTCAGAAGCCCACAATGAAAAGGATGTGAAGCAACCGTACATTG ATCAAGTACTTTTGTTAAGGTTGTGAGTTTTAGATTGGAGAACTAGCGGTGGATTTCTGAACTAGTGTTGGAGCTTGTAA CACTTTCTTTTCTAAGTCATGGTTGCGTTGAACTTTTCAATGTTCGACTTTGGTTTACTTCTTAGACTAGCCCCTTCGCA TGATATAATCATATAAATTATTTTTTCAAAGTTTGATCTAGTGTTTGAAAACTCAGAC
CDS sequence (LotjaGi3g1v0009000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAACAGCGCTGTTCAGTCACAGGGAAGCATCTCATCAACCAGTGTAACCAACCTACCTGCTGATCCTCATGCTGG TTCTTCCAACCCAACTGAATTTGTAAACCATGGTCTAACTCTTTGGAATCAGACACGGCAACGTTGGATAGGAAATAATA AAAGGCCTGAGAAACAAACAGAACAATCGCGTGAACCAAAATTGAGTTGGAACGCAACGTATGATAGTTTACTGGCGAGC AACAAGCCATTCCCTCAGCCTATTCCCCTTGCGGAAATGGTAGATTTTCTAGTGGATATCTGGGAACAAGAGGGCTTGTA TGACTGA
Protein sequence (LotjaGi3g1v0009000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNSAVQSQGSISSTSVTNLPADPHAGSSNPTEFVNHGLTLWNQTRQRWIGNNKRPEKQTEQSREPKLSWNATYDSLLAS NKPFPQPIPLAEMVDFLVDIWEQEGLYD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 50 | 50 | - | – | |
| MobiDBLite | 1 | 70 | 70 | - | – | |
| PANTHER | 1 | 108 | 108 | 1.9E-60 | – | |
| PANTHER | 1 | 108 | 108 | 1.9E-60 | – | |
| Pfam | 6 | 64 | 59 | 5.8E-10 | ||
| Pfam | 67 | 108 | 42 | 4.9E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0009000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…