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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0011700 |
| Transcript ID | LotjaGi3g1v0011700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT3G15690.2 Single hybrid motif superfamily protein; Swiss-Prot: sp|Q06881|BCCP_NOSS1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TrEMBL-Plants: tr|I3T9E9|I3T9E9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0011700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1281521..1287341) extracted from Lotus japonicus Gifu genome v1.2.
GGAGAGTGGAAGCAACCAATCCAAGTAGAAGTAGAGCCCAGCTGTAACCTTCAACCTTTGTGACACTTTTGTCTTTTTGT GACACTTTTGTCCTTTTCCAGAATCTACTCTTCTTCTTCTTGTTTCTTTTCTTCACTCTTCACACTTTCGTTTCAACTGT CAACACCTCACACTCACTCTCTCATCATCTCATGGGATTCTCTCTGATTCCATCTTCTAGCTTCTTCACTGCTTCTTGAC CACTGAATCATTTACCCTTTTGCGAGATTTTTTTGTCCTAATGGCTTCATGTGAGTTTTTTTTTTTTTTTTGCTTACCCC TTTTCTGCTAATGGCAAAGCTTATGACTTTATTGGATTGCATTGACTTTGAAAAGAAAAAAGAGATTTTTCTTTTACCCC TTTTGCTTTTGGTGTCCTTCATTTTTCTGTTTTGAATGTGCTCTGTAATATTAGACTGTGGGGTTGAGATATGGAATGTG GAATGGAATTTGATCCCACAATATTATCTTTGCATGTCTGAAACAGGATAAAAAAATGGATTTCAGGATTAAATTTTGGT TATCTAATATGGTGATTGCTGTTTAGTGATATGAATTGAAGTTGTATTATAATTTTGGATTAACAAAATGTGACTTAAAA CTTAAAAGAGGCAGAGCCACATAAGCAATTGTGAGTAAACAAACTTGATTGTCACATAATGGTAGGAAGCTTTTCATTTC AAATGAAATGGTAGATAAAGGACAGAGTAATATCCTAGCACTAACCCCTTGGTATGGGACTACAAGGTATCCAAGTGTTT GCTAAAATGCCAATAATATCACAAGCTTCACTTAGATAGTTTGATGTTTTCCATTTTTTTTAATTGTAAATAATTGGATC AACAACATTTTGAATTGCGAATTTTTGTTATTTGAATTAGCACTAACCCCTTAGTAATTTTTTGAAGATATTGTATTTTC CTTGAAAAACTTAATTTTTATTTATTTGTATAATCAAATATTTTCTTCTTAGATTTCATTTTCTACAGCTCAGAGCATCA TTTAAAAATATGCATTTGTTAATTTTTTTAACATTTAAAAGCAACTCTTTCTTTATTCTTCCTTCAGGAATCATTATGTT GTCTGTTGACCATGCAATTGATGAATGAGTTTGGAGTTTTACTCAGACCTTGAAATAGTTTTATGTGTACTACTAATAGA TGATTGATTATATGTGTTGTAATTGTATTACAGGCAATGTTAAAGCATTGAACTTGTGCTTTGGTGGAAAGAGAGTCAGT CTTTCGCAACAGTTTGGTACAAGAAATTGGATCATCAGGAAGTCAGTGCAGTACACTAGTTTGGATATGTCACAACATAG AGTTGGATTTTTAAAGTCTTCTAATGGCCCATTGTCACAGATCCAACGTAATTTCTTGTATTCTTTGATATTACGAATTA TTTTCTTGTATCGGCTATAGAAAATGTCACTGCTTTATTACTCAATTTCTTCAAGTCTATTGAAAAATTCCAGCCATTGA TGATTTCTAGGAGACTTAATGCATTAGTTCTGTCCTATTTAAGATTATGAATGTTTTACAGTTTGTTTCCTCTGAATACT TGAAATTATATGAATTATCTACTCTTACATACATTTATTTTAAGAAAATAAATCAGTTGGAGATTATTCAAAAAATTAAC ACTCATTTTGGTTCCCCAAAGATCTAGGCAACATCAATTTGATCCTCCGAACAAAGTTAATACTAATTTAATCCCTCAAT CACATGAAGTTACATCAACTTTGCCTTCCAAAAAAATGAGATCAATTTAGTCACTCAATAACATCAATTTAGTTCCTCAC TCTTGTGATTCCTAATTAACAAACAAAAGGCCAATTTTGATGTGAGTATCCATGATTGAGGGACTCGTCTGATGTTACCT GCATCTTTGGAGGAGAATGTGTTTTCTCAAAAGAATAAAAATTGATCTGAAGTCTAGTTTAAATTGCTAATCTGTATGAC AAATTAACCTATTTGGGCTTCATTCTATTTTTGTGTGTACAACTAGACACTAATATGATCTACATCACTGTACTGTTGAC AGTACTGTGTATAGAAATATAGATTCTAAGCAACTTCCATTTCCATATGCTTCTACTAGTTTGCATTTTCCAGTGTTAAA AAGAATGTAGACATTAGACTGAAGCCTGTCTTAGTTTATGTTGGGTGATTTCCACAATTCTTAGTTTATTAAGGCCTCTG TTGGTTTATTTCAATCTTAGATTCTTTGAGGAATATACTGATATGCTCACGCCTTCCTGCTATAATCTGATTCACAAATT CAAGAGTGTTTAAAGTTTAAAGTGACTTTTTAATTTTTTACTTAAAACTGACTTTAGAATACCATATAAAGTAATTGAAG TTTTGGATATGGCAAAAACTATTAACTTGATATTTGTACCATAGTCTGGCTTACATGATATTCCTTTACTGATGACATGA CAGCTGTTACAAGTTCAGAAAATGGCTCTAAAGAGATCGAATCTTCTGGTTTGACAAGTACGCTGATTCCTAAGCTCAAC GAGGTTAGTACTTAGTAAATGCCATTGCCATTGCCATTGCTCTTCTCTATTTTCACCAGCATTCAGCATCTATAAAACAA ATCCAAATTAATGATGACTTTATTATGCACCCTTCATATATTACCCTATACGTTCATATAATATAATTGTTTTTAAGGTG TTATTCAGTTTCCCGCCGTGCTGTTTGACCTGATTTATTGACCCTGTTTGGTTTATGAGTAAACTGCTTCATAAATATGA AACCTTTTCATGTATATAACTTCAATTGTTATGCATTAGCATGTGCATATGTATATTATCCTTTGTGCCAGTTTATATTT GTGGTCTAAAATTGGTCAATCCCAACTTGAAAACTTGCTGTACTTAGGCTATTAACCTTAAATTCTTTCAGATTAGGCTT ATGAACCTATCAGATGTTTAACTCCCTGAGGCTTGAGCTATGCTACACTGGTCGGTTCAGGCTTGCGCTCTCATAAGAAT GCTGAAACTATCATACTCATGTTCAACCTTAGCTTGAACCTTTCATTACTTGAAGAAAAATCCAAAGAATTCTGCATTCC CAAACTATATGGAATCTGAACAACAAAAATTTGGATGGATCTTTCATGATTTCTTTTACTTGGTTGTGTTAAATAATATT GTAATCTTTAGTTCTGAAGTATTGGCATGCCCACAAAATCTTGGACTTTATGTCTTTTATGACTCTTGCCAGAGAGATAT GCCATGTCATAACTATTTTATACCTTATCCTTGAATGATGAATGGAAAAATTTCTTAAGATCGCCGTGCTAAACCCGGAA GTGCTCATACCATGCCAAAGGCATCTCTTTCTATATGTATGGAAATTCTTGTTCTGAAGTTTAACAAATATTATTTCAAT CTCTTTGCAGGTGGAATTCCTTCTCACAAAGTTATGCGAGACTTCAATTGGGGAGTTAGAATTAAAAGTAAGCTCAATGA AGTTTACTAGCACTTCATTTTCTCTCCCTCATAAGGACATTATATAGTCTACATTTTCATTCTTGCTTTAAATTGTTGTT TTCCTTTTTTCATTGCCATAGCTTGCTGGGTTTCACCTGCATGTATTGAGGGATTCAACTGAAAAAGTTAAAACTCTACC TCGTCAAACGCCTGCTTCTGTAAATATAAATGTTGTCCCTGAAGCACCAAAATCTAATGGCCCAGTTGCTTCATCATCAT TGGCCATTTTGAAGCCAGAGCCTTCTTCAGGGTCCGTCCAGAGATTCCTAGACAAAGCTGCTGATGAAGGCTTTGTAATA ATTTACTCACCTAAGGTAATCATCTGAAACTTAATATACATTACATTCCTCACATAATGCACTCTAAAACCTTGGAGCAG GTGGGTTTCTTTAGGAGATCTCGAACCATAAAGGGGAAACGCGCTCCACCATCATGTAAAGAGGTACAGTTCCATGTTAC CTAACGTTGTGTGGATATGGAGAAATCTACCATTTTTCAAAGATCTAATTTTGATAAAGAGAAATCTACCATTTTTCAAA GATCTAATTTTGATAAATTTCCCTATCTGTATTGACAAGTTAAATGTTAGTTTTAATACAATTCCAAGACTACAATCTTC TGAAAATAAGGCTGGTCAGTGACACAATTTATTGAAATATCAGTTAGTTTGTATCTCTCAGATTTAACATTAATTTAAAA TGAGGTGATGATCAGTGTGGTTCATTGCGTATTGGCAGACTCAAAAAGTTCAGGAGGGGCAAGTGATTTGTTACATTGAA CAGCTTGGTGGTCAACTGCCAATTGAGGTTTGGGTCTTTTACTTCAAACTTTCCCTTCTTAATTCTTCCACATTTCCATA AGTTGTGATCACTTCTGACTATATTAGTACTATCTCTGTTTGTGATCTTTTGTTGTTTAAGGTTATGCACACAGTTTAAG AGTTCCTTAAGTGATATATGACTTGACTAAAATACACTTCTTTAAAAAGTGAGTTGTCAAAGAGAGGGAATGATAGTAAT TATTTGAATAATTGGTGAGAATGATGATAGGTGAGAAATGTAATTATAGCAATTAGGTGAGTAATTCTAAAATTAGATAA ATAGTCTTGAATTTCTTAGAACAATGTTTTGGAAGCAAAAATGGGGAAATTAAAATAACAAAATGTCATGCACGGAGGTA GTAATATAGACATGAGAAACCATGTCAAATTGTTAACACTCACTTTAACACTTTCTTTCAAACATTCTATATTTTATCGG TTGAAATCCACATGGTATCTACTGAATTATATGGCTCGTCCCGATTTGGTGGGGTTGACGTGAATATCAACCAATAAAAC TATAAAAGAGTGTGTTGGAAAAGAAGTTATAAAGTTAGTATTAGGGCCCTTAGTATTATTAGCACTCATCTTCTATACAT TACTGTGACAATCACTCACAATGTTTTCTTCACATTTCTTTCTAGTCTGACGTATCCGGGGAGGTTATCAGGATTCTACG AGAGGATGGCGGTTAGTTACATCTTCTTTTTGGGACTTTCATTGTGTAAACTTGAGTAGTTTTCTGTGCATTTCATTCTT TTTTTTGTTGTTGTTTTTTTGACAGATCCTGTTGGATATGGTGATGCACTGATTGCAATATTGCCATCATTTCCAGGAAT AAAGAAGCTCCAATAGATCTTACAGGATCTTATTTTTCTTAAATATACACATTCCCTGTAATTAACTGATATGATACTTT TAAGAGCAAGTGATATTGTGACCCTTATCATATATGACTTAGTCCAAAGTTTTGCCATGCTGAGTTTCAGTATATTAGTG CTTCTGAATCTGAAGTCTCAACTTTTTGTTCAAATCATCATCACCTTCTATTCCAGACAAGTAAAAGGTGATTTTCTTTT TAAGTTCGCATATGAGGGAACTAGTGATCAAGTTCATGTTGGAACTAGTGAAAAGTTTGGTTAAAAGACATCCCTTTATT TTGGTTTTGCATATACTAGAAAATGAGATGCATACAAATAAATGGAAAGGGAATTAGGAGAAAAAGCATAGAAAATAAGT GAGGTTTTAAATGTTTAGCTTAAGGGGAAATAAAGAGAAATTGGAATGAAATACAAGATGGCTATTCTCTAGATGGAAAT GTGAGTAGAAAGAAAATAAGTACTACATAAAGTACTTTATTATTCTTTAGTAAAAATTTCAATAAAAAAAAATACTAAGC TACGAAAACTGATAAATGAGACCACTACTTTGTTCTCCCTTCAATGTTCATGATGGATCTA
CDS sequence (LotjaGi3g1v0011700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCATGCAATGTTAAAGCATTGAACTTGTGCTTTGGTGGAAAGAGAGTCAGTCTTTCGCAACAGTTTGGTACAAG AAATTGGATCATCAGGAAGTCAGTGCAGTACACTAGTTTGGATATGTCACAACATAGAGTTGGATTTTTAAAGTCTTCTA ATGGCCCATTGTCACAGATCCAACCTGTTACAAGTTCAGAAAATGGCTCTAAAGAGATCGAATCTTCTGGTTTGACAAGT ACGCTGATTCCTAAGCTCAACGAGGTGGAATTCCTTCTCACAAAGTTATGCGAGACTTCAATTGGGGAGTTAGAATTAAA ACTTGCTGGGTTTCACCTGCATGTATTGAGGGATTCAACTGAAAAAGTTAAAACTCTACCTCGTCAAACGCCTGCTTCTG TAAATATAAATGTTGTCCCTGAAGCACCAAAATCTAATGGCCCAGTTGCTTCATCATCATTGGCCATTTTGAAGCCAGAG CCTTCTTCAGGGTCCGTCCAGAGATTCCTAGACAAAGCTGCTGATGAAGGCTTTGTAATAATTTACTCACCTAAGGTGGG TTTCTTTAGGAGATCTCGAACCATAAAGGGGAAACGCGCTCCACCATCATGTAAAGAGACTCAAAAAGTTCAGGAGGGGC AAGTGATTTGTTACATTGAACAGCTTGGTGGTCAACTGCCAATTGAGTCTGACGTATCCGGGGAGGTTATCAGGATTCTA CGAGAGGATGGCGATCCTGTTGGATATGGTGATGCACTGATTGCAATATTGCCATCATTTCCAGGAATAAAGAAGCTCCA ATAG
Protein sequence (LotjaGi3g1v0011700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASCNVKALNLCFGGKRVSLSQQFGTRNWIIRKSVQYTSLDMSQHRVGFLKSSNGPLSQIQPVTSSENGSKEIESSGLTS TLIPKLNEVEFLLTKLCETSIGELELKLAGFHLHVLRDSTEKVKTLPRQTPASVNINVVPEAPKSNGPVASSSLAILKPE PSSGSVQRFLDKAADEGFVIIYSPKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRIL REDGDPVGYGDALIAILPSFPGIKKLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 267 | 265 | 1.5E-108 | – | |
| PANTHER | 3 | 267 | 265 | 1.5E-108 | – | |
| SUPERFAMILY | 169 | 256 | 88 | 6.67E-11 | ||
| Gene3D | 178 | 256 | 79 | 9.2E-17 | – | |
| Pfam | 201 | 256 | 56 | 1.5E-8 | ||
| CDD | 202 | 256 | 55 | 3.54782E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0011700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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