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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000089
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We have found 38 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.226s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0268829.1
n.a. PREDICTED: acetyl-CoA carboxylase 1-like [Glycine max] gi|356508126|ref|XP_003522811.1| chr0 139230600 139243243 +
3 domain predictions
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Lj0g3v0346539.1
n.a. PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic-like [Cicer arietinum] gi|502130085|ref|XP_004500525.1| chr0 181789300 181795688 -
2 domain predictions
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Lj1g3v2838150.1
n.a. PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like [Glycine max] gi|356531878|ref|XP_003534503.1| chr1 32288256 32297348 -
3 domain predictions
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Lj1g3v3008790.1
n.a. biotin carboxyl carrier protein subunit [Glycine max] gi|351721795|ref|NP_001235174.1| chr1 34196828 34202744 +
3 domain predictions
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Lj2g3v1079560.1
n.a. PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic-like [Glycine max] gi|356551156|ref|XP_003543944.1| chr2 17554613 17557342 +
3 domain predictions
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Lj2g3v1155540.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex-like [Glycine max] gi|356498274|ref|XP_003517978.1| chr2 18293212 18296709 -
3 domain predictions
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Lj2g3v3185320.1
n.a. PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Glycine max] gi|356501546|ref|XP_003519585.1| chr2 40914410 40922829 +
3 domain predictions
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Lj3g3v0075810.1
n.a. PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic-like [Glycine max] gi|356550600|ref|XP_003543673.1| chr3 743107 748497 +
2 domain predictions
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Lj3g3v0708190.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex-like [Glycine max] gi|356498274|ref|XP_003517978.1| chr3 7650461 7652185 -
3 domain predictions
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Lj4g3v0654460.1
n.a. PREDICTED: glycine cleavage system H protein, mitochondrial-like [Cicer arietinum] gi|502143341|ref|XP_004505304.1| chr4 10575793 10578426 +
2 domain predictions
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Lj4g3v1152920.1
n.a. PREDICTED: ent-kaurenoic acid oxidase 2-like [Glycine max] gi|356495547|ref|XP_003516638.1| chr4 17227150 17232598 -
2 domain predictions
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Lj4g3v2309290.1
n.a. PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like [Glycine max] gi|356564223|ref|XP_003550355.1| chr4 32119862 32127826 -
3 domain predictions
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Lj5g3v1003320.1
n.a. PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like isoform X2 [Cicer arietinum] gi|502115337|ref|XP_004495179.1| chr5 15781280 15787890 -
3 domain predictions
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Lj5g3v1737080.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like [Glycine max] gi|356576335|ref|XP_003556288.1| chr5 24917872 24926530 +
3 domain predictions
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Lj5g3v1853260.1
n.a. PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like [Glycine max] gi|356576165|ref|XP_003556204.1| chr5 26490955 26494385 +
3 domain predictions
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LotjaGi1g1v0026900.1
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT4G26910.1 Dihydrolipoamide succinyltransferase; Swiss-Prot: sp|Q8H107|ODO2B_ARATH Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial; TrEMBL-Plants: tr|A0A1J7GQS7|A0A1J7GQS7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0026900 LjG1.1_chr1 3243197 3251551 -
3 domain predictions
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LotjaGi1g1v0246300.2
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59093162 59109061 +
3 domain predictions
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LotjaGi1g1v0246300.3
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59093322 59109042 +
3 domain predictions
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LotjaGi1g1v0246300.4
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|I1JVH6|I1JVH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59094710 59108673 +
3 domain predictions
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LotjaGi1g1v0246300.5
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59094710 59108673 +
3 domain predictions
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LotjaGi1g1v0246300.6
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59097181 59108583 +
3 domain predictions
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LotjaGi1g1v0486900.1
n.a. Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT5G16390.1 chloroplastic acetylcoenzyme A carboxylase 1; Swiss-Prot: sp|Q42783|BCCP_SOYBN Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic; TrEMBL-Plants: tr|I3RZK7|I3RZK7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0486900 LjG1.1_chr1 99990485 99999262 -
3 domain predictions
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LotjaGi1g1v0510100.1
n.a. Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT5G15530.1 biotin carboxyl carrier protein 2; Swiss-Prot: sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic; TrEMBL-Plants: tr|I3SZG2|I3SZG2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510100 LjG1.1_chr1 102881143 102884822 +
3 domain predictions
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LotjaGi2g1v0157500.1
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G52200.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q0WQF7|ODP21_ARATH Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|I3SH23|I3SH23_LOTJA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi2g1v0157500 LjG1.1_chr2 55669945 55690710 -
3 domain predictions
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LotjaGi2g1v0265400.1
n.a. Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT5G15530.1 biotin carboxyl carrier protein 2; Swiss-Prot: sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic; TrEMBL-Plants: tr|I3SWG0|I3SWG0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0265400 LjG1.1_chr2 73477975 73480869 +
3 domain predictions
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LotjaGi2g1v0278200.1
n.a. Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G25860.1 2-oxoacid dehydrogenases acyltransferase family protein; Swiss-Prot: sp|Q9SQI8|ODP24_ARATH Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic; TrEMBL-Plants: tr|I1J6K8|I1J6K8_SOYBN Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi2g1v0278200 LjG1.1_chr2 74992983 74996900 -
3 domain predictions
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LotjaGi2g1v0415700.1
n.a. Glycine cleavage system h protein; TAIR: AT1G32470.1 Single hybrid motif superfamily protein; Swiss-Prot: sp|Q39732|GCSH_FLAAN Glycine cleavage system H protein, mitochondrial; TrEMBL-Plants: tr|I3SRF4|I3SRF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415700 LjG1.1_chr2 91343424 91344609 -
2 domain predictions
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LotjaGi3g1v0011700.1
n.a. Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT3G15690.2 Single hybrid motif superfamily protein; Swiss-Prot: sp|Q06881|BCCP_NOSS1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TrEMBL-Plants: tr|I3T9E9|I3T9E9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0011700 LjG1.1_chr3 1281521 1287341 +
2 domain predictions
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LotjaGi3g1v0419400.1
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G13930.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q8RWN9|ODP22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A0B2S5Z1|A0A0B2S5Z1_GLYSO Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82669625 82678634 -
3 domain predictions
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LotjaGi3g1v0419400.3
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G13930.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q8RWN9|ODP22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A0B2S5Z1|A0A0B2S5Z1_GLYSO Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82669625 82678634 -
3 domain predictions
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LotjaGi3g1v0419400.4
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G54220.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q5M729|ODP23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A151T9E3|A0A151T9E3_CAJCA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82670605 82675770 -
3 domain predictions
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LotjaGi3g1v0419400.5
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G54220.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q5M729|ODP23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A151T9E3|A0A151T9E3_CAJCA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82670605 82675918 -
3 domain predictions
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LotjaGi3g1v0419400.6
n.a. Acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G54220.1 Dihydrolipoamide acetyltransferase, long form protein; Swiss-Prot: sp|Q5M729|ODP23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A151T9E3|A0A151T9E3_CAJCA Acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi3g1v0419400 LjG1.1_chr3 82670605 82675920 -
3 domain predictions
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LotjaGi4g1v0083600.2
n.a. Glycine cleavage system H family protein; TAIR: AT2G35120.1 Single hybrid motif superfamily protein; Swiss-Prot: sp|O82179|GCSH2_ARATH Glycine cleavage system H protein 2, mitochondrial; TrEMBL-Plants: tr|I3S7G1|I3S7G1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0083600 LjG1.1_chr4 10945360 10947666 +
2 domain predictions
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LotjaGi4g1v0338800.1
n.a. Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT3G06850.1 2-oxoacid dehydrogenases acyltransferase family protein; Swiss-Prot: sp|Q9M7Z1|ODB2_ARATH Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial; TrEMBL-Plants: tr|A0A072V2G4|A0A072V2G4_MEDTR Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi4g1v0338800 LjG1.1_chr4 71894538 71899043 -
3 domain predictions
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LotjaGi5g1v0170200.1
n.a. Acetyl-CoA carboxylase, putative; TAIR: AT1G03090.2 methylcrotonyl-CoA carboxylase alpha chain; Swiss-Prot: sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; TrEMBL-Plants: tr|A0A151QXF8|A0A151QXF8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0170200 LjG1.1_chr5 43773156 43782290 -
3 domain predictions
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LotjaGi5g1v0279000.1
n.a. Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; TAIR: AT1G34430.1 2-oxoacid dehydrogenases acyltransferase family protein; Swiss-Prot: sp|Q9C8P0|ODP25_ARATH Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic; TrEMBL-Plants: tr|A0A0S3SNP9|A0A0S3SNP9_PHAAN Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Found in the gene: LotjaGi5g1v0279000 LjG1.1_chr5 59434608 59442702 +
3 domain predictions
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LotjaGi6g1v0081500.1
n.a. Biotin carboxyl carrier acetyl-CoA carboxylase; TAIR: AT3G56130.1 biotin/lipoyl attachment domain-containing protein; Swiss-Prot: sp|Q06881|BCCP_NOSS1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TrEMBL-Plants: tr|I3SR75|I3SR75_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0081500 LjG1.1_chr6 15607697 15614544 +
2 domain predictions
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