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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0017300 |
| Transcript ID | LotjaGi3g1v0017300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinesin-like protein; TAIR: AT3G16060.1 ATP binding microtubule motor family protein; Swiss-Prot: sp|Q940Y8|KN13B_ARATH Kinesin-like protein KIN-13B; TrEMBL-Plants: tr|I1MCP5|I1MCP5_SOYBN Kinesin-like protein; Found in the gene: LotjaGi3g1v0017300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1832365..1837998) extracted from Lotus japonicus Gifu genome v1.2.
TGTGAGCCGGAGCATTTTCAAAAACACAACGGGACCTACGTTCCTTCACACACCCTTACGACGTCGTTTCCACTTTCTAC TACGCTTCAGTTCGCACGTGCCACTCAACCAGTGAGAACTATAGAACACTCTCTCTCACTCACTCTTTCTCTCTCTCTCT ACAATTTTTCAATTTCAAAGGCTTTCATTCATTTTTCAATTTTCATAAATATAAATATAAATATTATTATTACAACCAAC AACGAACACTGCAGTTAGTTGCAGTAGTCGTATTTATATTCTATAATCTATCTTTCTCCGATCTGATCGCCGGTGGAAGA TGAACGGCGGTGCAGGGAGACAGGGGCTGAGATCTGGTTCAACCGCCGTGCACCACCAGCGTCAGCACTCCGATAACAAC TTCCTCGACGGCGGCTCATCCACCGGCACCGCCAACAGGTGGCTCCAATCTGCTGGCCTTCAACATCTTCATTCCTCCTC CGCCAATCCCCTTCCTCCTCTTCAGGTAATCAGTCCCTCATCATCTTCACTATTTTCAATCTGATGGATCTTGACTTGAT TTTGATTTGATTTGAAATGCGAGTAGGATTATAGCATGTACGGCGGCGGAGTGCATAGGAATGCGCAGAGGAGCTTCAAT GGAGGAGGAACTGAGTATTACATGGAGCCGGCTACGCCTCCAGGTGCTCACCGTGCTTTGACGCAGAAGAAGAACGGCGA TGATTCTTCCGGTGATTTCAGCCCTGGCTTGTTGGATCTGCATTCGTTTGACACTGAGCTTCTTCCTGAGGTAGTTGGCC TTTTCGATTTTGTGCTTCTTCGTAGTTTGCATTGCATCTTTTGAAATGTGTAGGCTATAGATTATAGAAATGTTCTGTTA TATTGACTGTCCTTACAATGAATGTATAGCCCTAGGGAGTGTTCAATCTATGCGAAATTGTAGTTCATTCGATGGAAAAT TGTTGCATCTGCCTCGAACTTTTACATTCACCGGGATATTGTGTATTTAATTTATTCATTCCTTTTCACATTATGTGAGG AGTAAAAGCATTTCCTCAATCTAGATGTGCTAGTTGATTTTGTTACAAATAAGCTGTAAGAGTTGCACTCTTAGCTTGAT TATGTAGGGTGTATAAAAGTTAGGTTAATCTGTTTTCAACTAGGATGTATGATAGATGAACAATTGAACATGAATAGGTA GATTGAATTTGCATATAACTTGTCTATCTTGCTAGATTCCAGCTTCCAATGCACATGATGCCAGTTTCTTGTATCAACCT AGCCGGGGTAGGAGCTTTGATGACGCAGAAACTTACATGATGAGCAAGCAGACAGCCAAAGCTCGTGCTACTGAAAATGT ACTGAAAGTTTTTCCTGCAGACAAAGAGAAATCTAGTTCTGTGGCAAAGATTAAAGTTGTGGTATGTTCTCTCACATATC TCAATTTGCCATTCATGTTTCAATTCTAATTGTTGCTTTTTCTTTCAAAATGTTTCTGCTGACCTATGCCATAGAGATTG CATTGGCACAGTAACCAGCTTAGTACTCATTGTACTACATTTGAAATTCATTGAGTTGTCTGTAAATGAAAGTTAAATCT TGCCCTATTATGAATAACATCACTTTTTAAGTTTGTTCTCATATTTGTATGTGGCTATTCTAATGCAGGTTCGTAAAAGA CCAATGAACAAGAAAGAATTAGCAAAGAATGAGGAAGACATTATAGAAACATATTCCAATTCTTTAACAGTGCATGAAAC TAAACTGAAGGTGAGTTTTATAACTTACAAGCAATAGGGATAAATGGTTGCAATATCTTTAGGTTTAGAAATATCATATT AAGTTACTGAAAATGACTTATGTACTAAGAAATCAAGTTTGGTGCTGCCTATGTATCTGTTATTTCCAAATTTTTGTCTT GGTGAATCTGAAATCTGACTTGAAAATGATACAGATAATCTGTACATGATAGTAACTGAAAAACACAATCAAATGTGATT TTACAAATATGCAGAGTGTATGTATTTATCAGTCTGCTTATTTTGAAAATGAAATACCATTTCTAGGGACAGTATTGTAC TATGATGATAATTATTTCCCCAATAATTTCATCACTTGTCAGTTCTTATGAAAAGTTTTTGGCATGATAATCTAATAGAT ATTTTATATTTGATTCTAAAACATGATTTACAGGTTGACCTTACCCAGTATGTGGAAAAGCATGAATTTGTTTTTGATGC TGTCTTGGATGAAGAGGTTACGAATGATGAGGTAACTATAATGTAATTAAGTGTATAGTTCAAAAGAATGATAATATAGG TGATATATTCCTACATTTATAACCTTTTTACTTTTGTAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTT TGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGTGATGACAGCTCTCAAATTACAGCCTGCCTGAGGATAA ATTTTGTTTTCATGTCTATTGATGAAGTGATACCTTTCCCCTTTACAAAATTTAAGTTTTGGCCATGACCATTTAGAATA TAAAGCTTGTAGGACATTATACAGTTATTTGATTTATCATCAATGTTACAAATTCTACCTGATGTGAAAAGGCCATGATT ATTGTTGTGGATGTTCAATGCTTTAATTACATTTGTTCAAGTTATCTTCTTTGATTATTTATTGTTTGTCATTTAGTTTG GGGTATTGTGAATAAGTGATAGATGTTCCCAAATGTTTTCATTTCAATCTATGAGTCAAAGTAATTCTTGAGTTCTGTAA AAGGTAAATCGAGATTCTAAGGTGCCGATATTTCATGTGAATTTGACTTTCATGATTTGCGCTATGAGGGTACTTTTAAT AGATACCATTTTCTGCTTTTCTAGGAAGTGGAAAAACTTTCACAATGAAGCCGCTGCCACTTAAAGCATCAAGGGACATC CTAAGATTGATGCATCATACTTACAGGAACCAGGGATTTCAATTGTTTGTGAGTTTCTTTGAAATATACGGCGGGAAGCT TTTTGATCTCCTTAATGACCGAAAGTACGTCAAACACTCAAATCCCTTCTTTGCCACTTGCATCTTTGATCTCTCTGTTT TTGATGTTTAAAGTTGTACTTCTGCAGAAAACTTTTCATCAGGGAGGATGGGAAGCAGCAAGTTTGTATTGTGGGTTTGC AAGAGTACTGTGTATCTGATGTGGAAAGCATCAAAGAACTGATTGAGAGAGGAAATGCCACAAGAAGTACAGGCACCACT GGTGCAAATGAGGAGTCATCAAGGTCTCATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAA ACCTCCCCGTCCTGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACAACAGATAATGACA AACAGACAAGGTATAGTTGAGCTTGAATTAGATAAGATGGACCCATGTTGTTACTTATCTAAATTAAATGAGTGTTTATG AAGGAAAACTCCTTATGCGTTTATTAGATTGGATTTGACTCCAAATTCTGCCATATACTTTATTATTGAAGATATCTCAG AATTGGAATGCTATAGTATCACGAATTTTAAACATCCCTCGGGCATTCCGTTACCAGTCTAATGATTTTTTTTTGTCGTT TGTTTCCAATTAAATGAAACAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCTTAAAGGAATGCATAAGAGCT CTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAGTTGACTGAAGTTTTGAGGGATTCATTTGTCGGCAATTC CCGCACTGTTATGATATCGTGCATATCCCCAAGCTCTGGTTCATGTGAACATACTCTGAATACACTAAGATATGCTGACA GGTAATGATGAATTTTCTGTTAAATGTAGTTCTGTATCACTTACTCCTTCAAACCATCCACACTGCACCTCACATGCAGA CACAGCATAACCACCAATTTGATAAAAGGGTAAAGAAAATTCATGGTTTCACTGTTCCACACTGTTTCAAAATTCAGGGT AAAAAGTCTATCTAAAGGTAACAATTCGAAGAAGGATGTCTTATCTTCGACTTTCAACCTTAAAGAATCAACTACGGTTC CCTTATCTTCTGTTACTGCATCGGCCTATGAGGATTGCACAGCTGATGCATGGTCTGACGAAAATGAAGGGGGTGATTTT AGCCCCTCTGAAGAGTACTACGAGCAGGTGAAACCATCATTGAAGAAAAATGGAAAGATGGAATCATATGCTACAACTGA GGTCAAGTTGAAGAAACCCAGTGGTCAGATAAAATGGAAGGACCTCCCAAAAGCTGAACCAAAAGCAGCTAGTCCAGAGG ATGATTTAAATGACCTCTTACAGGTAAAATACTGGGTACTGAGACAATGATTATTATAGAAAAAACCTAGAACTCATTGT TCCCTAAAGCATATGTCATTATTTCAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAAACCATGAA TATTGTTAGAGAGGTATTGATATTATCTTTATTATTATTCTCTCATTTCATTTATTCTTTTCGGGAACAGAGCCATGTGT CATGTAGTGGCTTCAATTTACAATTAAACTTCATTCACACCCCAAACCCCCACACCTAGAGAGATAGGAAGAGAAGATAG AGAAATGAGAGATATGATGGATGATGTGTTAGGAAAAAAACAGACAGATGAGTGGAAAAAGTTGGTGGAAATGTGATGGA AGTGAAAGTGAGGTGAGTAAATCAAAACCCGTATTTCAAAGATTTTTTTGGGAAATAGCATAAACAGGGATTTTGTGCAT GTTGGCATTGATTAAAAAGAATAGATCCTGGGACTTGCTACTGCATACTTCCAAGGAATGATGCGAAGTCCACAATTCTC ATTCATATTTTTATCTGCTCTTGACATACAGGAGATGAATCTCTTGGTTGAAGCAGATCAACCAGGAAATCAGCTGGATG GTTATGTAACAAGACTAAATGCCATTCTTTCTCAGAAGGCGGCTGGCATCTTGCAGTTGCAAACCCGTTTAGCTCATTTT CAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCCAATGGTTACTGATATCATTTAAAACGGACTCATAGTGAGAA GGTTTTATTTCTGTGGTCAGAATGATTCATTCCTGCGATTCAGTGGAAGATTATGATAGATCTGAGATATGAAGTGGTAC TGTTACTTGTTGATTCATCATGATTTTGTACCTTGGTTACTCTCCTTGAGAAGGGTTTCACTTTTTTCTCTGTACCTTAC TAAGAATGTAGCCATGTATTGGTTTTACTTGCTGCTGTCAAGGCAATGTATCAATGTTGACAATGTATAAAAGCTCTGTT GATGTTTGATTGATCAATTGAATATTTATATTTTTCAAATTAAGTATTCTACCAATTTCATGTTTGATATACGAATAGCT GTGGCTCGTCATTTGATGTAAGTCCATGTGGCCAAACCCCATCCTGTTATGATTTGCGAGTGTGTTAGACTGTTAGGATT TGCGACAGCATCAATTCCATTGTCCCAAATGCAA
CDS sequence (LotjaGi3g1v0017300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACGGCGGTGCAGGGAGACAGGGGCTGAGATCTGGTTCAACCGCCGTGCACCACCAGCGTCAGCACTCCGATAACAA CTTCCTCGACGGCGGCTCATCCACCGGCACCGCCAACAGGTGGCTCCAATCTGCTGGCCTTCAACATCTTCATTCCTCCT CCGCCAATCCCCTTCCTCCTCTTCAGGATTATAGCATGTACGGCGGCGGAGTGCATAGGAATGCGCAGAGGAGCTTCAAT GGAGGAGGAACTGAGTATTACATGGAGCCGGCTACGCCTCCAGGTGCTCACCGTGCTTTGACGCAGAAGAAGAACGGCGA TGATTCTTCCGGTGATTTCAGCCCTGGCTTGTTGGATCTGCATTCGTTTGACACTGAGCTTCTTCCTGAGATTCCAGCTT CCAATGCACATGATGCCAGTTTCTTGTATCAACCTAGCCGGGGTAGGAGCTTTGATGACGCAGAAACTTACATGATGAGC AAGCAGACAGCCAAAGCTCGTGCTACTGAAAATGTACTGAAAGTTTTTCCTGCAGACAAAGAGAAATCTAGTTCTGTGGC AAAGATTAAAGTTGTGGTTCGTAAAAGACCAATGAACAAGAAAGAATTAGCAAAGAATGAGGAAGACATTATAGAAACAT ATTCCAATTCTTTAACAGTGCATGAAACTAAACTGAAGGTTGACCTTACCCAGTATGTGGAAAAGCATGAATTTGTTTTT GATGCTGTCTTGGATGAAGAGGTTACGAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTTGA ACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGAAGTGGAAAAACTTTCACAATGAAGCCGCTGCCACTTAAAG CATCAAGGGACATCCTAAGATTGATGCATCATACTTACAGGAACCAGGGATTTCAATTGTTTGTGAGTTTCTTTGAAATA TACGGCGGGAAGCTTTTTGATCTCCTTAATGACCGAAAAAAACTTTTCATCAGGGAGGATGGGAAGCAGCAAGTTTGTAT TGTGGGTTTGCAAGAGTACTGTGTATCTGATGTGGAAAGCATCAAAGAACTGATTGAGAGAGGAAATGCCACAAGAAGTA CAGGCACCACTGGTGCAAATGAGGAGTCATCAAGGTCTCATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGC AATGAATCCAAACCTCCCCGTCCTGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACAAC AGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCTTAAAGGAATGCATAAGAGCTC TTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAGTTGACTGAAGTTTTGAGGGATTCATTTGTCGGCAATTCC CGCACTGTTATGATATCGTGCATATCCCCAAGCTCTGGTTCATGTGAACATACTCTGAATACACTAAGATATGCTGACAG GGTAAAAAGTCTATCTAAAGGTAACAATTCGAAGAAGGATGTCTTATCTTCGACTTTCAACCTTAAAGAATCAACTACGG TTCCCTTATCTTCTGTTACTGCATCGGCCTATGAGGATTGCACAGCTGATGCATGGTCTGACGAAAATGAAGGGGGTGAT TTTAGCCCCTCTGAAGAGTACTACGAGCAGGTGAAACCATCATTGAAGAAAAATGGAAAGATGGAATCATATGCTACAAC TGAGGTCAAGTTGAAGAAACCCAGTGGTCAGATAAAATGGAAGGACCTCCCAAAAGCTGAACCAAAAGCAGCTAGTCCAG AGGATGATTTAAATGACCTCTTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAAACCATGAAT ATTGTTAGAGAGGAGATGAATCTCTTGGTTGAAGCAGATCAACCAGGAAATCAGCTGGATGGTTATGTAACAAGACTAAA TGCCATTCTTTCTCAGAAGGCGGCTGGCATCTTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGC ATAATGTTTTGGTTTCATCCAATGGTTACTGA
Protein sequence (LotjaGi3g1v0017300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGGAGRQGLRSGSTAVHHQRQHSDNNFLDGGSSTGTANRWLQSAGLQHLHSSSANPLPPLQDYSMYGGGVHRNAQRSFN GGGTEYYMEPATPPGAHRALTQKKNGDDSSGDFSPGLLDLHSFDTELLPEIPASNAHDASFLYQPSRGRSFDDAETYMMS KQTAKARATENVLKVFPADKEKSSSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVF DAVLDEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTFTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEI YGGKLFDLLNDRKKLFIREDGKQQVCIVGLQEYCVSDVESIKELIERGNATRSTGTTGANEESSRSHAILQLAIKRSVDG NESKPPRPVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNS RTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSTFNLKESTTVPLSSVTASAYEDCTADAWSDENEGGD FSPSEEYYEQVKPSLKKNGKMESYATTEVKLKKPSGQIKWKDLPKAEPKAASPEDDLNDLLQEEEDLVNAHRTQVEETMN IVREEMNLLVEADQPGNQLDGYVTRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSNGY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 35 | 35 | - | – | |
| MobiDBLite | 7 | 35 | 29 | - | – | |
| MobiDBLite | 75 | 115 | 41 | - | – | |
| PANTHER | 137 | 703 | 567 | 3.9E-296 | – | |
| PANTHER | 137 | 703 | 567 | 3.9E-296 | ||
| Gene3D | 159 | 514 | 356 | 1.5E-118 | ||
| SUPERFAMILY | 183 | 511 | 329 | 9.15E-103 | ||
| SMART | 186 | 517 | 332 | 4.8E-113 | ||
| CDD | 188 | 509 | 322 | 0.0 | – | |
| ProSiteProfiles | 188 | 511 | 324 | 95.164 | ||
| Pfam | 194 | 510 | 317 | 7.6E-95 | ||
| PRINTS | 268 | 289 | 22 | 4.3E-30 | ||
| PRINTS | 377 | 394 | 18 | 4.3E-30 | ||
| ProSitePatterns | 410 | 421 | 12 | - | ||
| PRINTS | 411 | 429 | 19 | 4.3E-30 | ||
| PRINTS | 461 | 482 | 22 | 4.3E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Microtubule motor activity | Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Microtubule-based movement | A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi3g1v0017300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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