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LotjaGi3g1v0017300.2

Overview

Field Value
Gene ID LotjaGi3g1v0017300
Transcript ID LotjaGi3g1v0017300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinesin-like protein; TAIR: AT3G16060.1 ATP binding microtubule motor family protein; Swiss-Prot: sp|Q940Y8|KN13B_ARATH Kinesin-like protein KIN-13B; TrEMBL-Plants: tr|I1MCP5|I1MCP5_SOYBN Kinesin-like protein; Found in the gene: LotjaGi3g1v0017300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:1832765..1837535) extracted from Lotus japonicus Gifu genome v1.2.

TTCCTCGACGGCGGCTCATCCACCGGCACCGCCAACAGGTGGCTCCAATCTGCTGGCCTTCAACATCTTCATTCCTCCTC CGCCAATCCCCTTCCTCCTCTTCAGGTAATCAGTCCCTCATCATCTTCACTATTTTCAATCTGATGGATCTTGACTTGAT TTTGATTTGATTTGAAATGCGAGTAGGATTATAGCATGTACGGCGGCGGAGTGCATAGGAATGCGCAGAGGAGCTTCAAT GGAGGAGGAACTGAGTATTACATGGAGCCGGCTACGCCTCCAGGTGCTCACCGTGCTTTGACGCAGAAGAAGAACGGCGA TGATTCTTCCGGTGATTTCAGCCCTGGCTTGTTGGATCTGCATTCGTTTGACACTGAGCTTCTTCCTGAGGTAGTTGGCC TTTTCGATTTTGTGCTTCTTCGTAGTTTGCATTGCATCTTTTGAAATGTGTAGGCTATAGATTATAGAAATGTTCTGTTA TATTGACTGTCCTTACAATGAATGTATAGCCCTAGGGAGTGTTCAATCTATGCGAAATTGTAGTTCATTCGATGGAAAAT TGTTGCATCTGCCTCGAACTTTTACATTCACCGGGATATTGTGTATTTAATTTATTCATTCCTTTTCACATTATGTGAGG AGTAAAAGCATTTCCTCAATCTAGATGTGCTAGTTGATTTTGTTACAAATAAGCTGTAAGAGTTGCACTCTTAGCTTGAT TATGTAGGGTGTATAAAAGTTAGGTTAATCTGTTTTCAACTAGGATGTATGATAGATGAACAATTGAACATGAATAGGTA GATTGAATTTGCATATAACTTGTCTATCTTGCTAGATTCCAGCTTCCAATGCACATGATGCCAGTTTCTTGTATCAACCT AGCCGGGGTAGGAGCTTTGATGACGCAGAAACTTACATGATGAGCAAGCAGACAGCCAAAGCTCGTGCTACTGAAAATGT ACTGAAAGTTTTTCCTGCAGACAAAGAGAAATCTAGTTCTGTGGCAAAGATTAAAGTTGTGGTATGTTCTCTCACATATC TCAATTTGCCATTCATGTTTCAATTCTAATTGTTGCTTTTTCTTTCAAAATGTTTCTGCTGACCTATGCCATAGAGATTG CATTGGCACAGTAACCAGCTTAGTACTCATTGTACTACATTTGAAATTCATTGAGTTGTCTGTAAATGAAAGTTAAATCT TGCCCTATTATGAATAACATCACTTTTTAAGTTTGTTCTCATATTTGTATGTGGCTATTCTAATGCAGGTTCGTAAAAGA CCAATGAACAAGAAAGAATTAGCAAAGAATGAGGAAGACATTATAGAAACATATTCCAATTCTTTAACAGTGCATGAAAC TAAACTGAAGGTGAGTTTTATAACTTACAAGCAATAGGGATAAATGGTTGCAATATCTTTAGGTTTAGAAATATCATATT AAGTTACTGAAAATGACTTATGTACTAAGAAATCAAGTTTGGTGCTGCCTATGTATCTGTTATTTCCAAATTTTTGTCTT GGTGAATCTGAAATCTGACTTGAAAATGATACAGATAATCTGTACATGATAGTAACTGAAAAACACAATCAAATGTGATT TTACAAATATGCAGAGTGTATGTATTTATCAGTCTGCTTATTTTGAAAATGAAATACCATTTCTAGGGACAGTATTGTAC TATGATGATAATTATTTCCCCAATAATTTCATCACTTGTCAGTTCTTATGAAAAGTTTTTGGCATGATAATCTAATAGAT ATTTTATATTTGATTCTAAAACATGATTTACAGGTTGACCTTACCCAGTATGTGGAAAAGCATGAATTTGTTTTTGATGC TGTCTTGGATGAAGAGGTTACGAATGATGAGGTAACTATAATGTAATTAAGTGTATAGTTCAAAAGAATGATAATATAGG TGATATATTCCTACATTTATAACCTTTTTACTTTTGTAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTT TGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGTGATGACAGCTCTCAAATTACAGCCTGCCTGAGGATAA ATTTTGTTTTCATGTCTATTGATGAAGTGATACCTTTCCCCTTTACAAAATTTAAGTTTTGGCCATGACCATTTAGAATA TAAAGCTTGTAGGACATTATACAGTTATTTGATTTATCATCAATGTTACAAATTCTACCTGATGTGAAAAGGCCATGATT ATTGTTGTGGATGTTCAATGCTTTAATTACATTTGTTCAAGTTATCTTCTTTGATTATTTATTGTTTGTCATTTAGTTTG GGGTATTGTGAATAAGTGATAGATGTTCCCAAATGTTTTCATTTCAATCTATGAGTCAAAGTAATTCTTGAGTTCTGTAA AAGGTAAATCGAGATTCTAAGGTGCCGATATTTCATGTGAATTTGACTTTCATGATTTGCGCTATGAGGGTACTTTTAAT AGATACCATTTTCTGCTTTTCTAGGAAGTGGAAAAACTTTCACAATGAAGCCGCTGCCACTTAAAGCATCAAGGGACATC CTAAGATTGATGCATCATACTTACAGGAACCAGGGATTTCAATTGTTTGTGAGTTTCTTTGAAATATACGGCGGGAAGCT TTTTGATCTCCTTAATGACCGAAAGTACGTCAAACACTCAAATCCCTTCTTTGCCACTTGCATCTTTGATCTCTCTGTTT TTGATGTTTAAAGTTGTACTTCTGCAGAAAACTTTTCATCAGGGAGGATGGGAAGCAGCAAGTTTGTATTGTGGGTTTGC AAGAGTACTGTGTATCTGATGTGGAAAGCATCAAAGAACTGATTGAGAGAGGAAATGCCACAAGAAGTACAGGCACCACT GGTGCAAATGAGGAGTCATCAAGGTCTCATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAA ACCTCCCCGTCCTGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACAACAGATAATGACA AACAGACAAGGTATAGTTGAGCTTGAATTAGATAAGATGGACCCATGTTGTTACTTATCTAAATTAAATGAGTGTTTATG AAGGAAAACTCCTTATGCGTTTATTAGATTGGATTTGACTCCAAATTCTGCCATATACTTTATTATTGAAGATATCTCAG AATTGGAATGCTATAGTATCACGAATTTTAAACATCCCTCGGGCATTCCGTTACCAGTCTAATGATTTTTTTTTGTCGTT TGTTTCCAATTAAATGAAACAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCTTAAAGGAATGCATAAGAGCT CTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAGTTGACTGAAGTTTTGAGGGATTCATTTGTCGGCAATTC CCGCACTGTTATGATATCGTGCATATCCCCAAGCTCTGGTTCATGTGAACATACTCTGAATACACTAAGATATGCTGACA GGTAATGATGAATTTTCTGTTAAATGTAGTTCTGTATCACTTACTCCTTCAAACCATCCACACTGCACCTCACATGCAGA CACAGCATAACCACCAATTTGATAAAAGGGTAAAGAAAATTCATGGTTTCACTGTTCCACACTGTTTCAAAATTCAGGGT AAAAAGTCTATCTAAAGGTAACAATTCGAAGAAGGATGTCTTATCTTCGACTTTCAACCTTAAAGAATCAACTACGGTTC CCTTATCTTCTGTTACTGCATCGGCCTATGAGGATTGCACAGCTGATGCATGGTCTGACGAAAATGAAGGGGGTGATTTT AGCCCCTCTGAAGAGTACTACGAGCAGGTGAAACCATCATTGAAGAAAAATGGAAAGATGGAATCATATGCTACAACTGA GGTCAAGTTGAAGAAACCCAGTGGTCAGATAAAATGGAAGGACCTCCCAAAAGCTGAACCAAAAGCAGCTAGTCCAGAGG ATGATTTAAATGACCTCTTACAGGTAAAATACTGGGTACTGAGACAATGATTATTATAGAAAAAACCTAGAACTCATTGT TCCCTAAAGCATATGTCATTATTTCAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAAACCATGAA TATTGTTAGAGAGGTATTGATATTATCTTTATTATTATTCTCTCATTTCATTTATTCTTTTCGGGAACAGAGCCATGTGT CATGTAGTGGCTTCAATTTACAATTAAACTTCATTCACACCCCAAACCCCCACACCTAGAGAGATAGGAAGAGAAGATAG AGAAATGAGAGATATGATGGATGATGTGTTAGGAAAAAAACAGACAGATGAGTGGAAAAAGTTGGTGGAAATGTGATGGA AGTGAAAGTGAGGTGAGTAAATCAAAACCCGTATTTCAAAGATTTTTTTGGGAAATAGCATAAACAGGGATTTTGTGCAT GTTGGCATTGATTAAAAAGAATAGATCCTGGGACTTGCTACTGCATACTTCCAAGGAATGATGCGAAGTCCACAATTCTC ATTCATATTTTTATCTGCTCTTGACATACAGGAGATGAATCTCTTGGTTGAAGCAGATCAACCAGGAAATCAGCTGGATG GTTATGTAACAAGACTAAATGCCATTCTTTCTCAGAAGGCGGCTGGCATCTTGCAGTTGCAAACCCGTTTAGCTCATTTT CAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCCAATGGTTACTGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0017300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTACGGCGGCGGAGTGCATAGGAATGCGCAGAGGAGCTTCAATGGAGGAGGAACTGAGTATTACATGGAGCCGGCTAC GCCTCCAGGTGCTCACCGTGCTTTGACGCAGAAGAAGAACGGCGATGATTCTTCCGGTGATTTCAGCCCTGGCTTGTTGG ATCTGCATTCGTTTGACACTGAGCTTCTTCCTGAGATTCCAGCTTCCAATGCACATGATGCCAGTTTCTTGTATCAACCT AGCCGGGGTAGGAGCTTTGATGACGCAGAAACTTACATGATGAGCAAGCAGACAGCCAAAGCTCGTGCTACTGAAAATGT ACTGAAAGTTTTTCCTGCAGACAAAGAGAAATCTAGTTCTGTGGCAAAGATTAAAGTTGTGGTTCGTAAAAGACCAATGA ACAAGAAAGAATTAGCAAAGAATGAGGAAGACATTATAGAAACATATTCCAATTCTTTAACAGTGCATGAAACTAAACTG AAGGTTGACCTTACCCAGTATGTGGAAAAGCATGAATTTGTTTTTGATGCTGTCTTGGATGAAGAGGTTACGAATGATGA GGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTTGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAA CAGGAAGTGGAAAAACTTTCACAATGAAGCCGCTGCCACTTAAAGCATCAAGGGACATCCTAAGATTGATGCATCATACT TACAGGAACCAGGGATTTCAATTGTTTGTGAGTTTCTTTGAAATATACGGCGGGAAGCTTTTTGATCTCCTTAATGACCG AAAAAAACTTTTCATCAGGGAGGATGGGAAGCAGCAAGTTTGTATTGTGGGTTTGCAAGAGTACTGTGTATCTGATGTGG AAAGCATCAAAGAACTGATTGAGAGAGGAAATGCCACAAGAAGTACAGGCACCACTGGTGCAAATGAGGAGTCATCAAGG TCTCATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCTCCCCGTCCTGTTGGGAAGCT CTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACAACAGATAATGACAAACAGACAAGAATAGAAGGTGCTG AAATCAATAAGAGCTTACTTGCCTTAAAGGAATGCATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGAGGC AGTAAGTTGACTGAAGTTTTGAGGGATTCATTTGTCGGCAATTCCCGCACTGTTATGATATCGTGCATATCCCCAAGCTC TGGTTCATGTGAACATACTCTGAATACACTAAGATATGCTGACAGGGTAAAAAGTCTATCTAAAGGTAACAATTCGAAGA AGGATGTCTTATCTTCGACTTTCAACCTTAAAGAATCAACTACGGTTCCCTTATCTTCTGTTACTGCATCGGCCTATGAG GATTGCACAGCTGATGCATGGTCTGACGAAAATGAAGGGGGTGATTTTAGCCCCTCTGAAGAGTACTACGAGCAGGTGAA ACCATCATTGAAGAAAAATGGAAAGATGGAATCATATGCTACAACTGAGGTCAAGTTGAAGAAACCCAGTGGTCAGGAGA TGAATCTCTTGGTTGAAGCAGATCAACCAGGAAATCAGCTGGATGGTTATGTAACAAGACTAAATGCCATTCTTTCTCAG AAGGCGGCTGGCATCTTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTC ATCCAATGGTTACTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0017300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MYGGGVHRNAQRSFNGGGTEYYMEPATPPGAHRALTQKKNGDDSSGDFSPGLLDLHSFDTELLPEIPASNAHDASFLYQP SRGRSFDDAETYMMSKQTAKARATENVLKVFPADKEKSSSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKL KVDLTQYVEKHEFVFDAVLDEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTFTMKPLPLKASRDILRLMHHT YRNQGFQLFVSFFEIYGGKLFDLLNDRKKLFIREDGKQQVCIVGLQEYCVSDVESIKELIERGNATRSTGTTGANEESSR SHAILQLAIKRSVDGNESKPPRPVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRG SKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSTFNLKESTTVPLSSVTASAYE DCTADAWSDENEGGDFSPSEEYYEQVKPSLKKNGKMESYATTEVKLKKPSGQEMNLLVEADQPGNQLDGYVTRLNAILSQ KAAGILQLQTRLAHFQKRLKEHNVLVSSNGY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 50 50 - –
PANTHER
PTHR24115:SF871
84 531 448 1.4E-258 –
PANTHER
PTHR24115
84 531 448 1.4E-258
IPR027640
Gene3D
G3DSA:3.40.850.10
94 449 356 9.8E-119
IPR036961
SUPERFAMILY
SSF52540
118 446 329 5.32E-103
IPR027417
SMART
SM00129
121 452 332 4.8E-113
IPR001752
ProSiteProfiles
PS50067
123 446 324 95.164
IPR001752
CDD
cd01367
123 444 322 0.0 –
Pfam
PF00225
129 445 317 4.9E-95
IPR001752
PRINTS
PR00380
203 224 22 2.3E-30
IPR001752
PRINTS
PR00380
312 329 18 2.3E-30
IPR001752
ProSitePatterns
PS00411
345 356 12 -
IPR019821
PRINTS
PR00380
346 364 19 2.3E-30
IPR001752
PRINTS
PR00380
396 417 22 2.3E-30
IPR001752
PANTHER
PTHR24115
532 591 60 1.4E-258
IPR027640
PANTHER
PTHR24115:SF871
532 591 60 1.4E-258 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0017300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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