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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0018300 |
| Transcript ID | LotjaGi3g1v0018300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine zipper protein; TAIR: AT1G79840.1 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein; Swiss-Prot: sp|P46607|HGL2_ARATH Homeobox-leucine zipper protein GLABRA 2; TrEMBL-Plants: tr|A0A151QT10|A0A151QT10_CAJCA Homeobox-leucine zipper protein GLABRA 2; Found in the gene: LotjaGi3g1v0018300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1915736..1921501) extracted from Lotus japonicus Gifu genome v1.2.
ATTACCTGTGAAGACTTTAATTCTTTAAAGCATAGGCTGCATATAAAGATGATGATTAAAAGCTAAAGATTAAAATATTG AACAGCTTTTGCTTTATTATATGCCCTGTGTAAAGCATCCCCACTTGATTATTAGTTTGTGGTATATATAGTACTTATTT AAAATGTGCACATATCATGTTTGCATAATTAAACTCAACTTGTTGGACCACACTGCATTACAAAATTGGAAGCTTGTTGT TTTGTTAAAATACAAAATCAACAGAAAAAGGTGACATGAATGTCATCATGTTTGTAGGCTTTTCAAAGAGTCACCACATC CTGATGAAAAGCAGAGACAACAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTCTGGTTCCAAAATCGT CGAACCCAGATCAAGGTAATTCAATTGAATCAATTTTAATGCAAATTTCCACTGTTTTTCTTCTGTGAAATGTGAATTTA ACAATGACATTCATTGATTGGGTTTTGCAGGCAATACAAGAGCGTCATGAAAACTCATTGTTGAAGACAGAAATTGATAA ACTAAAGGAGAAAAATAAGAGCTTGAGAGAGATCATAAACAAAGCTTGCTGCCCCAATTGTGGGGTGCCCACTACAAGCA GAGATGGTGCCATGCCAACTGAAGAACAACAACTACGCATTGAAAATGCCAAACTCAAAGCTGAGGTTTTTTTATAAAAC TATCTCCAACTACATTTCTGATTTTTTTTCTTACTACATGGTTATGGACATGTAATTCTATTAATACACTGCAACATAAA ATTTCTGGATCGGTCACTGTGTGCAGGTTGAGAAACTTCGAGGAGCTTTAGAAAAATACGCACCAGGGACAACTTCCCCT TCATGTTCTTCTGGCCATCATGACCAAGAGAACAGAAGCTCTTTGGATTTTTACACTGGAATTTTTGGACTTGATAAGTC AAGGATAATGGACATTGTAAACCAAGCAATGGAGGAGCTCATAAAGATGGCCACAGCAGGGGAACCGTTATGGCTGCGTA GCTTTGAGACCGGTCGCGAAATACTTAACTATGATGAGTATGTGAAGGAGTTTGCAGCTGAAAATTCCGAGAGTACTGGG CCAAAGAGATCCATCGAAGCCTCAAGAGAGACAGGGGCTGTTTTTGTTGATCTCCCAAGGCTTGTCCAAAGTTTTCTAGA TGCTGTAAGACAACTTTTCCTACAAAAGCTACTCTTAATGTGTGTTTGGAAACTCTGATATATTTTCACCTTTAGGAGAG AAGTGAATATGATAGAAGCTTATGGAAGTAAAATTGATTTTGATAGTATCAAAAGTTAATCCAAACATCTTGACAGCATG TTTGGATCAGGCGTAGGAGACTCAAAATCAATTCTTTTCCTCCAGAAGCTTCACTTATAGCATGTTTGGATGAACTTTTT CTCTCTAAATCAATTATAACATCTAGAAGTTTGTCACATAAGATTTTTCACATAACATTAATGCACTTAGTAGTTTTTGC TCCAATGTGATTTTGAGGTAATGTGGAAACTCACTGCCAATCCAAACTGTAGCTCTTTTTTTTTGTCTTTGACCCGGTGT CCTCAGCAGAAAATTGTAGTTGTTCATCCCAATAAATAATTTTTCCGATATTCATACTTGTGTCCTCGCTCTCATATGAG CCTAGCTTGCTTACCACTAGATCGACCGTATCCAAATATTTACTGAATCACTTTTTCTCAAACGTGAAAATAAGTAACTC TATTCTGTATTAAAGGCCTCTTAAATTCAATTCATAATGTGGGTTGGAATGGATATATTTGAATGCATTTATTATGCTTG TTGCAGAATCAATGGAAGGAAATGTTTCCGTGTTTGATATCCAAAGCAGCAACAGTTGACATCATATGCAATGGAGAAGG ATCTAACAGGAACGGTGCAGTGCAACTGGTAAGGGGAATTACCACTGTGCTAGGTTTCTTTCATATTAAGTTTTCACTGG GCCTACTCAATGGACGGTTAGATTAAAGTTTAGGCGGTCCCACTATATCATTTAGTGCACGTTTGGTTACACTGTTGAAA ACTACAGTGAAACTAAAATCACGATAGAAACAAGTTTTTGTAACTGTCCACTGTGATTTTCCATTGTATATCTAAACATG CACAGCGTAGTAACTCTTGGCATTTACCTCTGCTACATATCTTGTCCAAAAGGTACCCAAGTGGAATCTCTCTTTCCTAG TATTTTTGTTGTATATAAAAAAAATTTCCTCTGAAAGGAAAATACCCACTATCCATGAAAAATAGGCCTATGTTTTATAC TTTAATAGCTTTTTATCCCATATACAATACTTGAAGATAACAAGACAAACCAACATGAATTGGTTGAAGTTCTTAGATGT GGACCTTGAAAGTTTCATCAAGGGAGTAGTTACTAAAGATAATGGTTAAATTGATCTCTTAAAGTGTTGGAGGTTGATAA GTACGTTTCTAAAAGCAAGAAATAGTCCCGCGGTCTTTGATTGTGTAAAATGTCGGCCGGTTACTAATTTGGCCGATGTT TTATGTGATCACATGGACTAACTTGATCGATGTTTTACACAATTAGGGACCACAAAGGTATTTTCTAAGTCGAGAGATGA ACTTGTCGACACCTAATACTTTAAGAATCATTAGTGTCCAACACTTTCGATAACTATTTTGGCAATTCACTCACTCGTAT ATAATTTGACACGATGAGGAGAACACTATATTAACTTTAATTTTGTTTTTGTACTTTTGGTGGATAACAACAACCTTAAT TGAATTTTGTTTTGGGTGATGGATACAGATGTTTGCTGAACTACAAATGCTCACACCAATGGTGCCCACAAGAGAGGTGT ATTTTGTCAGGTACTGCAAACAATTGAGTGGTGAACAATGGGCAATCGTTGATGTATCCATAGACAAAGTAGAAGACAAC ATCGACGCTTCCCTCGTCAAATGCAGAAAACGCCCATCCGGTTGCATTATTGAGGACAAGTCAAATGGCCATTGCAAAGT ATGTACAAATTTCATTAATTCTAAATTGCTCTTCATTTTTGTCACATCATTTTCAGCTTTATTTTCTAAAAAAAAACTTG GTTATTATAGTCTGTGCAAACGCTCCCAAACACATAGAAAAAACAATGTTTAAAAAATCGGATCAATCACTAAACCGTTC GAGGCAACATTTCAATGTTCGAATTGTGGTCGAAGTGTCGAACTGTGGTTGTGACAAAAGCAATTAAATACTTTTTTAAT ATTATATACTATAATAGGTAATATAGTCACACAAGATATTAAGAAATTTATACTATTTAAATTTCAAATTATCATAGAGT TTCATCTTATATAATTTAAATGATAAAAATTAAAAATGACTAATAAATAGTTACAAATATTTTTTAATATAAAAAAGCCC AAAAAATACTTGACCGCTTGAATCCGGTTTTTCAATACCAATTCTGGATCAGCTTTTACCTTTTTTTGGACTTGTTCGAC CGGGTCTGACCGATTCTAAAATCAACCAGTTTTGACCGAATTGATCAAGAAACCAGTTCTCAATTGGATCAGCCGATCCG GTCTAGATTTCCAAACACTAAGAAAAACTAATTTATAAGAAGTTAACTTTTTTTCATTTCTTATATTTAGTTTTGAATTT AATTTATATGCATTGCGTAAAACATCTTAGTCACATTTCACAATGTTTCTCTTTTACTATTTTTAATTTTAATCTATTTA TGATATGAGAAAATCAGAAAACAGTGAATCATAAATGTTTGTGTAAAACTTTTTACACTATTATGAGAGCAAAGTTATTA AACTTAATTTTAATTATGAAAATATATTATTTTCACTTTACGTACTATATTTATTTCCTATACAAAGTTCCGAAACGAAA CAAAGGGGCATTTTTGTTTTTTTTTATAGGTAATGTTAGTTGTTAGAAATGTCAATAAATTAATCCCTCATCCGGGACCC CTCACCCTTTACCTCACCCAACCCTTATTTTTCTAGCTCTTACCACTTCTATCCTTCAGGGACAAGGGGCATTTTTGTAA AAATAAAAAACATGAAATGAAAATAGAAGTGAACATGCCAAAAAAATACCTAAAAATGAGTACAGCAGCAACAGCTAGAT AATCACCCATTGCAGCTGATTTTGTCGGTAGTAGAACTATGTATAATTGTATATTGTGCTATCATTTTCATGGGCACCAT TAGCCATACCATTACTTGGGAGAAGCCATGCAATAAAATTCCAGTTTCACATAGTGAGATGATGGCCCTCATTGAAGTGT GATTAATTGGAGTTGAACATAATGAGGAAATGGTGAAATAATTAAAAACTTCACTTGTGTTTGGTTATATTTTCTTCAAA CATCTTCTAATAACACACCTAATACTTGGTTATGCTATTGATGTTTGTTAATTTTGGGTTTAGGTAATCTGGGTGGAGCA CTTGGAATGCCAGAAGGGAGCAGTCCACACAATGTATCGCGCCATTGTGAACAGTGGCCTGGCCTTCGGGGCAAGGCACT GGATTGCGACATTGCAACTTCAATGCGAACGTCTTGTTTTCTTCATGGCAACTAATGTCCCCATGAAGGATTCCACTGGT GAGTATGAGTAATCAATTCAATTCTACCATATCTCATTGTTGCAACTTGCAACCATTAATTTCTCTTTGTTCATTCAATA CTTGAATAAAGAGGTAAGTATAAACTAATCAGACTAATGGTGATGATAAAATGTTAGGTGTTGCCACGTTGGCTGGGAGA AAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGGGCTTCTGCCATGCAGTCGGGGCATCAAGCTTCCACACATGGAC TAAGGTTACCAGCGAAAATGGGGAAGACATAAGGATTAGTTCTAGAAAGAACTTGAACGATCCTAGTGAGCCTCTTGGGC TGATACTGTGTGCAGTTTCTTCTGTGTGGCTGCCTGTCTCTCATAATGTTCTGTTTGATTTCTTGAGGGATGAAACTCGC AGGACTGAGGTAATTGATTTTCCTTCCAAATGTTTCTGTTTATTTGGTGAGTGATTTTGAAGGGTGATTGTGTTGATAAT TGTCATTGTTGTCACAGTGGGATATCATGTGCAGTAGCGCTTCAGTGCAGTCCATTGCAAATCTAGCCAAAGGGCAAGAC CGAGGCAATGCAGTAACCATTCAAGTAAGTTATTTCGGTTCAATACACTACACACTCACCTTAAGCAACGTCTCGGATTG AGTCTTATAAATTCATGTACTTGTCACTATTGATAATATGTGAAATCAAAATAAGCAATTATGTTCCTATATTAACCAAA ATATGGGATTCTTCTCATTTTGTAGACAATAAAATCCAAAGAAAACAGCATGTGGATACTGCAAGATAGCTGCACAAATT CTTATGAGTCAATGGTGGTGTATGCTCCAGTGGACATTACTGGCATGCAGTCTGTGATGACAGGATGTGATTCAAGCAAC CTTGCCATACTGCCCTCAGGATTCTCAATTGTTCCTGATGGCCTAGAGTCAAGGCCATTGGTGATTACTACAAGGAAGGA AGAAAAGAACACAGAGGGAGGATCTTTGTTTACAATAGCATTCCAGATCCTTACCAATGCTTCTCCTACAGCAAAGTTAA CATTGGAATCTGTGGACTCGGTCAACACTCTTGTATCATGTACATTGAGAAATATCAGAACAAGTTTACAGTGTGAAGAT GGATAG
CDS sequence (LotjaGi3g1v0018300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAACTGAAGAACAACAACTACGCATTGAAAATGCCAAACTCAAAGCTGAGGTTGAGAAACTTCGAGGAGCTTTAGA AAAATACGCACCAGGGACAACTTCCCCTTCATGTTCTTCTGGCCATCATGACCAAGAGAACAGAAGCTCTTTGGATTTTT ACACTGGAATTTTTGGACTTGATAAGTCAAGGATAATGGACATTGTAAACCAAGCAATGGAGGAGCTCATAAAGATGGCC ACAGCAGGGGAACCGTTATGGCTGCGTAGCTTTGAGACCGGTCGCGAAATACTTAACTATGATGAGTATGTGAAGGAGTT TGCAGCTGAAAATTCCGAGAGTACTGGGCCAAAGAGATCCATCGAAGCCTCAAGAGAGACAGGGGCTGTTTTTGTTGATC TCCCAAGGCTTGTCCAAAGTTTTCTAGATGCTAATCAATGGAAGGAAATGTTTCCGTGTTTGATATCCAAAGCAGCAACA GTTGACATCATATGCAATGGAGAAGGATCTAACAGGAACGGTGCAGTGCAACTGATGTTTGCTGAACTACAAATGCTCAC ACCAATGGTGCCCACAAGAGAGGTGTATTTTGTCAGGTACTGCAAACAATTGAGTGGTGAACAATGGGCAATCGTTGATG TATCCATAGACAAAGTAGAAGACAACATCGACGCTTCCCTCGTCAAATGCAGAAAACGCCCATCCGGTTGCATTATTGAG GACAAGTCAAATGGCCATTGCAAAGTAATCTGGGTGGAGCACTTGGAATGCCAGAAGGGAGCAGTCCACACAATGTATCG CGCCATTGTGAACAGTGGCCTGGCCTTCGGGGCAAGGCACTGGATTGCGACATTGCAACTTCAATGCGAACGTCTTGTTT TCTTCATGGCAACTAATGTCCCCATGAAGGATTCCACTGGTGTTGCCACGTTGGCTGGGAGAAAAAGCATTTTGAAGTTG GCACAAAGAATGACATGGGGCTTCTGCCATGCAGTCGGGGCATCAAGCTTCCACACATGGACTAAGGTTACCAGCGAAAA TGGGGAAGACATAAGGATTAGTTCTAGAAAGAACTTGAACGATCCTAGTGAGCCTCTTGGGCTGATACTGTGTGCAGTTT CTTCTGTGTGGCTGCCTGTCTCTCATAATGTTCTGTTTGATTTCTTGAGGGATGAAACTCGCAGGACTGAGTGGGATATC ATGTGCAGTAGCGCTTCAGTGCAGTCCATTGCAAATCTAGCCAAAGGGCAAGACCGAGGCAATGCAGTAACCATTCAAAC AATAAAATCCAAAGAAAACAGCATGTGGATACTGCAAGATAGCTGCACAAATTCTTATGAGTCAATGGTGGTGTATGCTC CAGTGGACATTACTGGCATGCAGTCTGTGATGACAGGATGTGATTCAAGCAACCTTGCCATACTGCCCTCAGGATTCTCA ATTGTTCCTGATGGCCTAGAGTCAAGGCCATTGGTGATTACTACAAGGAAGGAAGAAAAGAACACAGAGGGAGGATCTTT GTTTACAATAGCATTCCAGATCCTTACCAATGCTTCTCCTACAGCAAAGTTAACATTGGAATCTGTGGACTCGGTCAACA CTCTTGTATCATGTACATTGAGAAATATCAGAACAAGTTTACAGTGTGAAGATGGATAG
Protein sequence (LotjaGi3g1v0018300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTEEQQLRIENAKLKAEVEKLRGALEKYAPGTTSPSCSSGHHDQENRSSLDFYTGIFGLDKSRIMDIVNQAMEELIKMA TAGEPLWLRSFETGREILNYDEYVKEFAAENSESTGPKRSIEASRETGAVFVDLPRLVQSFLDANQWKEMFPCLISKAAT VDIICNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIE DKSNGHCKVIWVEHLECQKGAVHTMYRAIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKL AQRMTWGFCHAVGASSFHTWTKVTSENGEDIRISSRKNLNDPSEPLGLILCAVSSVWLPVSHNVLFDFLRDETRRTEWDI MCSSASVQSIANLAKGQDRGNAVTIQTIKSKENSMWILQDSCTNSYESMVVYAPVDITGMQSVMTGCDSSNLAILPSGFS IVPDGLESRPLVITTRKEEKNTEGGSLFTIAFQILTNASPTAKLTLESVDSVNTLVSCTLRNIRTSLQCEDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 550 | 548 | 1.9E-255 | – | |
| PANTHER | 3 | 550 | 548 | 1.9E-255 | ||
| Coils | 5 | 25 | 21 | - | – | |
| ProSiteProfiles | 58 | 294 | 237 | 39.183 | ||
| SUPERFAMILY | 60 | 291 | 232 | 6.59E-32 | – | |
| CDD | 62 | 290 | 229 | 9.38783E-114 | – | |
| SMART | 67 | 291 | 225 | 1.1E-70 | ||
| Pfam | 69 | 291 | 223 | 3.9E-56 | ||
| SUPERFAMILY | 313 | 485 | 173 | 1.51E-14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi3g1v0018300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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