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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0039100 |
| Transcript ID | LotjaGi3g1v0039100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bidirectional sugar transporter SWEET; TAIR: AT3G14770.1 Nodulin MtN3 family protein; Swiss-Prot: sp|Q9LH79|SWET2_ARATH Bidirectional sugar transporter SWEET2; TrEMBL-Plants: tr|I1MI63|I1MI63_SOYBN Bidirectional sugar transporter SWEET; Found in the gene: LotjaGi3g1v0039100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4191700..4196950) extracted from Lotus japonicus Gifu genome v1.2.
AAGAAGAAGAAACAAACTAAACCACTAATATATTTTGAAGCATGCGTCCACGGATACGAGTTTGAGGCGCACAGCACGCT GACATGGATAATTCATAATTGTGACTTGGAAGAGAAAGAGGGAGACAAAACAGACAAGCATATCCCGAATTTTATAACTC AGGATTCTGTATATTTTTGGACTCCAATTGTTGTTTCAACTTTGAAGATTCATGTCTCTGTTCAATGCTTCTTCCATCCC TATAGTTGGCAAGGATGCAGCTGGAATTGCTGGTACTTCATCTATCTCTCAGTTTCTGGATTTTTTGTTTTTCTTTTGGT TACTAGAAAGAACTTTAGTTTACCTATATTTGTTTACTCTAACAATCTGTGCCTAGACTATCTTTAATTCTTTATGTTGA TCAGTATATATGCTTGTTAATTTGTAGGGAACATCTTTGCTTTTGGGTTGTTTGTATCCCCCATGTAAGTTTTTTTAAAT GAATTTTTTTAAAGTGCTAGTTGGAACAGAAGAATTTGTTGTTGCTTGTATTAGTTACAAAGATTAAATTTGTTAACTTT TGTTCTGTTATGAATTGTAGACCCACATTTAGGAGAATTATCAGAAATGGGTCAACAGAAATGTTCTCAGGGCTGCCATA TATTTATTCCCTCATGAATTGTTTGATCTGCTTGTGGTATGGAACGCCTCTGATATCGCCTGATAATCTGTTGGTTACCA CTGTTAATTCAATTGGAGCTGCCTTTCAGCTTGTGTACATAGTCCTCTTCTTGATGTATGCTGAGAAAAGAAGAAAGGTT ATTCTTGTGATAGTGTTTGAAAACGAGTTGTCTAACTTATCTCACAGGGTTAAATAACCTCATCGTAGGTGGACCAATAA CATTTAAGATAAGCAGGCAGTGAACAACTGAATATTAATAACATCCATTTTTAACTTCAACTTTTTAAAAATAGTTATTG GTCCATCTCCGGTCGGGATTATAGCCCGATAGGGTAAGTCAGACGACCCAGTTGGAAAATTATGGTAAATATCGAAAACA AATTGGTTCCTTTCTAAATTGTGTCCCCACTCTAAACTGTCATTTGTTAGGTGAGAACTCTTGGACTACTGCTGGCAGTT TTGGGCGTTTTCGTGATCATACTAGTTGGGAGCTTGCAAATAGCTGATAGTACAGTGCGCCGAATGTTTGTTGGATTCTT GAGTTGTGCTTCTCTCATATCAATGTTTGCTTCTCCATTGTTTATAATTGTAAGCTTGTCATTTCTATATCCATTGAATG TTCAGCTAGTTTTTGGATCAATTAGCTTGATGAGCTGGTTTACATATTTATCCATATGATTTCCCAGAAATTGGTCATTC GGACAAGGAGTGTTGAGTTTATGCCGTTTTATCTTTCGCTTTCCACCTTCCTAATGAGTGTTTCCTTCTTTCTTTATGGA TTGCTCAGTGAAGATCCCTTCATTTATGTAAGAATCCTTTCAGCTCAGTTCAGTTCAGTTCAGTTCTTTCCTTCCTATTT CTTCTTGAGATACTCGTTTTAGTTTCAGATGCTTATTTTGTTGGCTTATATTTGTGTATGTTCATTTGTGTTTGATTTTT TAGGTGCCAAATGGGATAGGAACTATTTTGGGAATGGTACAATTGCTATTATACTTCTATTACAAGAGATCATCTGATCA AGACTCTACAGAACCGTTGATAGCTTCATATGGATGATCCGTGGCTCTGTGCTGCTGAGTTATGATGAGGGTAAAGGCAA GTACACTATTTGTGGTTAAGATTTATTGTTCTTCACAGTCAGTGTGAGGTAGTTATCAGAAATTGGTCCAAGGCATTTTT TGTGAGTTGAGTGAATGAATGAATGGTTTCGTTATATGAAGTATTTCGATTCAATTTATGGGAATATTTGAGTTTGCCCT TTCATCATATGTTGTTCTGTTTTTGGCATTGCCTTTTGTCAACTTTGCTATTTTTCTATGTGAGAATGGAAGGTTTTGTT GGATTAAATCTTTGCGATGAGCGTATGATGTTAAGTTCTACCTTCATATCTTAAAGCCAAATAGTGCCAGTCAAAAGTCT TAAACTCCTTACTTTAGGTATTCAATCTCTTCTGTACCAGTGTAGTGAAAATCATGTCTGTATTGCAATACCACTAGTTT CGAACCTGGATCCTCTCCTGCAGCACACTCTCTCCAACCCCTCCAGCACATTTCATCCACCGATTCAATCATCTAAAAGC TGAAATTAGTTTCACCAAAAAGCAAGTGTTAAATTACATAAACCCCTCACATTTATGTTGGTTGCACCAGGCAACCGCGG GAGAGAATCCAATTCCTAGTTTTCTGAACAAAAATCATTTAATCACAATCTTAATTTTATATAGGTTCAGATCAACTTAT TTGGTGCTGTCATTACTTCTTAATGTGTTCTTTTGAAGTACTGACTAGGAGAGCTGTCTTTTAATTTCCTTAATTGAACT ACCTAAGATATCCCATTTAGCTAACATTTTCTCATTGCATGTATATGTTGGCTTGGGATTGGTATTTGCCATTTGGTGAT CTATCAAGCAACGCCTTGTTGGCTGAAGATTATCCTGGAACTGTGCCGTATCGTAATGCAATGTTAATGTAGGATCTATA GCTAAATTGCATGTGATCATGAATTATGAAGTTACAGTATTGTTAAAATAAGGTTAGGCGGCGACTAAAGGAAGCACCAT CAGAAAATAGTGTTACGATTTGACTATCTTCACTAAAATAGGAGGATATTCCTATAAATCAAGTATTAAATTGACATAAA AATTATCTATGTTCTCCTACCTGGTAATGTTAGTTGAATTGCATTGTGTTTGTTTCAGTACAGATGGCCCTAAACTCGAT CTATTTACTTTCTCACATTTTTCTGCTGCCTGTAAGCTGTATTTATCAAGAATTTGGATCCTTTGCAGCAAACTGTTCTC TGCATCCCTTAACTAATACATGCTTTTAACTATCTGTCAAAATAAATTTATTAATCATGAAATAATCTTGGCCATTAAAG ATAAATGAAGGGTTATTGCAGAAGAGAGTTGCACAGCAGGAGAGGATCCAAATTCATTTATCAACGAGTCATTAACAATG ACAGAAAATGAAAACAAAGTGTGTCGACCACTTTGGTAACTCCTACCATTGAAATGGAAAATGTATGACTCAATGGAAGG GGAAAAGGGAAATCTTGTGAAATGAAAATTGCATATTAAAACTAGATCACATTATGTCATTGATCTCTGTCTGATACAAC TTACAAGAGAAAGAAAGACCAGTGACAGTACTATAGTAAATCTCTTAAAGTAGTTCTCACTGTAATCTCTCCATTTTCCT GCACAGAACAGAACCAAAGTTAGAAATAAACAAATGCAGCAAATGTGATGAACAAACTATCTCAAAAGCTGAGTAAAAAT GTTGTCTGAAACTGCAGGTTGCAACATTTCGTTGCTACAAAATCTTGGAGCGTTAAAGAAGTTGGAATCATGAATAAGGT TCAAATATTTTTGTTATGTATTTATGCATTCATTTTGGAGTTGCACTGTGCTTCAAATTAAGGCCAAGTTATGCAACATG CAGCTACATGGTACTATTGAATTGCACTGTGCATCCTAGAGTGCTTCATTCTGGCACTATTATCGCCTCCAATCAGGATT ACATTATCTGAATTGAGACCAAGTTATGTAACATGCAGCTACAAACATTATTTCAGAGGTTTTTATATTTAATCAAAGTT TGATTTTATCTATTGATCTCCACTTTGACTTCCTGCAGGCCACACGTGAATAAAGATCCAGAAATGATTCTCAGTTCACA ATTTCCTTAACTGAAATGGATATTAATATCATGCATAAACTTTACTTGTTACTGGGTTGGGAACCATATAACTGGTATCA TTGTTTTCCAATTTCATCATTGTTAGAATGCATGTTTGAAAATTCTTATATAATTGATTCTAAGTCCATAATCAATTCTA GGGAGAAGCTACAATTGGTATCTTCTGGGTATTAGAATTGATTCCGACAAAAGAGAAGCTGATCCAAACTCTTAACAGAA ATTGTGCCTAAAGGAAGAGTCCCCTGTATAAAAGAATGAATTTCACTTTTGTATATAATGCGCCAACTGAGGAAGTGGTT ATTGATTACCTGTGTTGAAATTGAAATTTCCTTGCAGTGTGTCTCATTCTCTAAATCATGAAGCAGCCTTCCTTTATCAT CATAGAGAATGAGGCCACTAAAACTTGGTAGCTCACACCTCTCCCCTCTCAGTATTGGTCTTTGCCACACTGCTGATGTT GAGTTATGACTTTGCCATCCACTTTCAAGACCATGTAGCCTTTGTAAGCCAAGCAATGGGGATCCCCTCTCCCTCTGCCA TCCAATGTTCTCTTCCAATTTGCGTGCCTTGCTCCACACCATTGACCCCGTCAGCACCCTCTTCACTGAAATCCACCCAC AACTCGGTTCCGACCATTCTGTAGACGTAGTAGTAGCAGTAGCAATAGCAGTAGCAGTAGCAGTAGCATTATTTGTGCTA TGAGTCTCATTCTCTTCTATAGCACCCTCTTGGTGCACAATCTTATTATTACAGGCCTTCCTTTTAAGTGCAATTACACT GCAAAGGCAAACAAGTGCAATGCATGCACAAGCTAGTAGAAGAATAGCACCTAGTGTTGAGAACTTCAATTTGTCTTCCA AATCCCACAAAGCTTCCATGAGTTCCTTGCTTTTTTCTATTTTTGGGTAACAAAGTGATATATCTGAATGATTCTAAGTG AGGAGCATAGTTTGTTGTTGGTTGAATATATTTGGTGATGTGGAATAATTAATAAAAAATAAAATACTAGTATTAATATG CAATGCATGATCATGTTGCCATGTGGGGTTGGCATGTTTCATATGAGGTCCACCGCTGGTTGAATTGTTGAAACTTGGAC CTCAAATTTACGTTTGTGGGGTATTTTATTGAAATTGTAGCCGTTTGTGATGAATTGTAAGAAGATGGCTCACCGTTCAA AGTTAATTAAAGGCTTCTCACGGGGACTCTGCAATCGCCATCATGTTATTGGAAAGCCTTCATTAAAATTTTGGAGAGTA GAAGCTGTTTTTACTACTCTTGCAGTGCGTTAAGTAAAGTGAAACTAAAGCAAAAGCACCTTGTGGATTAGTGAATGGAT GTGAAAATGAGTGTCAAGATCAGAGTAAAAAGCTCTCCATACCGAACGTGA
CDS sequence (LotjaGi3g1v0039100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCTGTTCAATGCTTCTTCCATCCCTATAGTTGGCAAGGATGCAGCTGGAATTGCTGGGAACATCTTTGCTTTTGG GTTGTTTGTATCCCCCATACCCACATTTAGGAGAATTATCAGAAATGGGTCAACAGAAATGTTCTCAGGGCTGCCATATA TTTATTCCCTCATGAATTGTTTGATCTGCTTGTGGTATGGAACGCCTCTGATATCGCCTGATAATCTGTTGGTTACCACT GTTAATTCAATTGGAGCTGCCTTTCAGCTTGTGTACATAGTCCTCTTCTTGATGTATGCTGAGAAAAGAAGAAAGGTGAG AACTCTTGGACTACTGCTGGCAGTTTTGGGCGTTTTCGTGATCATACTAGTTGGGAGCTTGCAAATAGCTGATAGTACAG TGCGCCGAATGTTTGTTGGATTCTTGAGTTGTGCTTCTCTCATATCAATGTTTGCTTCTCCATTGTTTATAATTAAATTG GTCATTCGGACAAGGAGTGTTGAGTTTATGCCGTTTTATCTTTCGCTTTCCACCTTCCTAATGAGTGTTTCCTTCTTTCT TTATGGATTGCTCAGTGAAGATCCCTTCATTTATGTGCCAAATGGGATAGGAACTATTTTGGGAATGGTACAATTGCTAT TATACTTCTATTACAAGAGATCATCTGATCAAGACTCTACAGAACCGTTGATAGCTTCATATGGATGA
Protein sequence (LotjaGi3g1v0039100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLFNASSIPIVGKDAAGIAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLMNCLICLWYGTPLISPDNLLVTT VNSIGAAFQLVYIVLFLMYAEKRRKVRTLGLLLAVLGVFVIILVGSLQIADSTVRRMFVGFLSCASLISMFASPLFIIKL VIRTRSVEFMPFYLSLSTFLMSVSFFLYGLLSEDPFIYVPNGIGTILGMVQLLLYFYYKRSSDQDSTEPLIASYG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 234 | 234 | 3.7E-128 | – | |
| PANTHER | 1 | 234 | 234 | 3.7E-128 | – | |
| Phobius | 1 | 15 | 15 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 16 | 36 | 21 | - | – | |
| Pfam | 18 | 103 | 86 | 4.9E-20 | ||
| Gene3D | 18 | 113 | 96 | 4.9E-11 | – | |
| Phobius | 37 | 47 | 11 | - | – | |
| Phobius | 48 | 68 | 21 | - | – | |
| TMHMM | 50 | 72 | 23 | - | – | |
| Phobius | 69 | 79 | 11 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 80 | 99 | 20 | - | – | |
| Phobius | 100 | 110 | 11 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 111 | 130 | 20 | - | – | |
| Phobius | 131 | 135 | 5 | - | – | |
| Gene3D | 135 | 230 | 96 | 1.9E-15 | – | |
| Phobius | 136 | 158 | 23 | - | – | |
| Pfam | 138 | 221 | 84 | 5.6E-23 | ||
| TMHMM | 140 | 162 | 23 | - | – | |
| Phobius | 159 | 169 | 11 | - | – | |
| TMHMM | 169 | 191 | 23 | - | – | |
| Phobius | 170 | 191 | 22 | - | – | |
| Phobius | 192 | 196 | 5 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| Phobius | 197 | 218 | 22 | - | – | |
| Phobius | 219 | 235 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0039100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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