Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0041800.1

Overview

Field Value
Gene ID LotjaGi3g1v0041800
Transcript ID LotjaGi3g1v0041800.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT5G26110.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q96S44|PRPK_HUMAN TP53-regulating kinase; TrEMBL-Plants: tr|I3SU70|I3SU70_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0041800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:4487938..4491104) extracted from Lotus japonicus Gifu genome v1.2.

CGCGCCGTTTTGTTCTGTTGAGTAGTCAGAACCGTTACCCTAGTTCAGACACGTACTGCTCTCACTCTCTCTCTGTCGAT CATTCTCCAATCGCTGTTACCATTTTCATCTTCCCCGTTTCTGGTAAATTATTTTGGTCCACTACTACAACTCTTCTTGC CATGTTCACTATTTTTTTCTGATCAATGTTAACTGTTAATAGAGTAATAGTGTTTCTCAGTTCTCTTTCGTGGTGTTTGT TTGGTTTTGAATGTGCTCTGTATTTGTAAATTTCGCATGAATTGCTGGCTGGTAGTGAAACGTTGTGTACATGCTGTGGT TCAATACTGCTGTCTCTGAAAGCTTCAACATTGAAGCTATAAAACTTAATTGGTAGGTGAGTCTGTGTATTCTCCAAGCT TCATTCCGCTCAAACGGGCTTGTGAAGGGTGTTAGAAATAATAATATAAAATCATTCATGTGACCCTTACCCAACAGCTA GGCTAATTGGTTCGTGATAGGCTTAGGTCCAAAATGGCAATATGAGTTCGGCATGATCATTATTTAATGATGATACTGAG TAATTGGAAATAAAAGAATCAATCAGATGAGCTCCCATCCATGACCTGTTTCATTATTTATGAAGCTGATTTGGATTGAT TCAAATTCATAAAGTTCAAATGGATGGTTTTTCCATAGAGTATAGACAAGTAGCAGGTACACAGATTATCAACATTTGCT ATCGATGTGCTAGCTATCCATAGGAGAAAATCCTTATCTTGTATTTGAGGATATAAATGAAATGTTTGTTTTAGCTATGG TGTACCTAGAGTCTGATTTCTATTTATGAACATAAATTTTATTTAGTTTGGATGAATGATGGTTGTCAATTGGGTGATAA TTGCAGCTGAAGGGTTAAATACAAGGAGTTTTCATTGCCAAAACCTTCAATATTATGGAGACTGAAGCTGACTTAAAAGA TAGCTCCCTCATCCTGATTAGGCAAGGAGCTGAAGCTGTAAGTATAAACCACTCCCTGGATTTGTAGAAGCAATTAGCAC CTACCCTTATAATTAAAAACTATATTGTCTGGTTTTATAAGTGCAATTTTTCCTGGACCTTTGGAAGCAATTGATTTCTA CCAGTGCGACAAGCTCCAAACATAAGTTTATAGATTGGACCTGCAATATATGCAAATTCATCTAGCTTTTTTATGTTCTT TTTTCAGAGGGTTTTTGAGTCTTCTTTTGTGGGAAGAAGGTCTGTTATCAAGGAACGTTTCTCAAAGAAATACAGACATC CAATTTTAGATTCTAAATTAACAATCAAGCGCTTGAATGCGGTCAGATTTAGATAAAATTGTTTTTTTTTAATAATTCTA ATGAAGTTCTATATATTTATGTGTCCCAGTCCATGTCTTGAATACTTTGTTCCACCAATTGGTTGTTGGAGCAGGAGGCT AGGTGCATGACCAAAGCAAGGCGACTTGGGGTTCGTACTCCTGTGCTTTATGCTGTGGATCCTGTGCTGCACACATTAAC ATTTGAATATGTTGAGGGGCCTTCAGTCAAAGATGTCTTTCTTGAATTTGGATCTCTTGGTGTCAATAAAGAACGGTTAG GCAACATTGCGTCCCAAATTGGCGATGCAATTGGAAAGTTGCATGATGGAGGCCTTGTTCATGGTGATTTAACGACATCA AACATGTTGCTGAAGAATGATGCCAATCAGTTGGTGAGTTTATTCATATCTTCGTAGGTCCCGAATGTACATTCTATTAC ACTTACTCAGGTTATGCAATATGAGAAATATAACCAACTTGAATTACAGAAGTCAAGTTTACTTTGTCTAGGTTCTTATT GACTTTGGTTTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTCCTGGAAAGAGCTATTCTTTC AATGCATTCTTCATGTGGGAATGTGGTAAGCCAACACCTCATTTTCCCCTTAGTCTTAACTGTTATTCTGTAAATTTTAA GGAGATGAAAACATGACTATAATTGTATGTATTGAGAATTTTAATTGGAATGCATTCCATATAGTCAGGGGTAAAACCTA GTGGACTAGTAAGAGACTTCTTAGTTGAAAGCTCGCTTAAATAGTGCGGAGTCAGGCTGTCCTTCTTCGAGAAACCTCAA TATGTTGTGGCGAGCGATGAGCCTAGCAAGTGTTTCCTCCATGGGGCGAGTAATGCTTTTATTTCGTGAGCAACTCGATC CATGGGAAAGCTATGTACTATTTTGCGGCATATGTGGGCACTTTGACCGCGCTTGTATAAGGCCCAAGTCTTAGGTGGAT AAGCTTTAGGGTTTTTACCTTTCCTACTATAAAAGGAAATGGATCATTGTAATTAAGGCATGTTCACTTCATATGCAAAA AGGGTGGGTAGGTTTAAGACTCTCATTCCGGTAGTGATTTAGCTTGGTCTCCTTCTTCACTTACTCAACGTGAACACCTA ACATGTAATACCATGGGATATGTATGAGCAAACCCAATTATGTTATATTGGGTGAGCTCCTTATCTCACAAATGAACATA TCATTGACTAACAGTTACCAAATGAACTTACTTGCCTTTTTGGTCTAAAGAGGCTCAGACTTAGCAAGCACCAAAGGTTT ATTATGCTACGCTATGGCTTCTGCATGGACACACTTAAGTTATGAACAAGTTATTAATTGACTGGCATGTTTTAATGTTA TAATTTGTCTGGACAGATGGATCAGGTACTTGCAGCATACCACAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGC TGGCGCAAGGTGCTGCCTTCCTCTTGTTTAAATTAAGACATTTTCTTTAAGAACTAGTACTTACTCCCTTGCATTTTTGT AACTTGTAGTGCGACAAAGAGGACGAAAGAGCACCATGGTTGGGTGATTCTTTCTCCAGTTTCATTTCCTTATCAGGGAT GACAATCGGTGAATGGAGCGATGTAATTCTATTTTTAACTTCTCCCTGTGTTTGCATCATGTATCATGCATATCTATTAC AGTTTTGAACTTATAATTGACATCTATTATGACTTTTATAATGTGGAACTATTTGAAACTTGAGTGTGGTTGTTATTACT GAATTGGTTGAATCAGCACTAATCATTATGATATGAAATAGAATAGT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0041800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGACTGAAGCTGACTTAAAAGATAGCTCCCTCATCCTGATTAGGCAAGGAGCTGAAGCTGAGGCTAGGTGCATGAC CAAAGCAAGGCGACTTGGGGTTCGTACTCCTGTGCTTTATGCTGTGGATCCTGTGCTGCACACATTAACATTTGAATATG TTGAGGGGCCTTCAGTCAAAGATGTCTTTCTTGAATTTGGATCTCTTGGTGTCAATAAAGAACGGTTAGGCAACATTGCG TCCCAAATTGGCGATGCAATTGGAAAGTTGCATGATGGAGGCCTTGTTCATGGTGATTTAACGACATCAAACATGTTGCT GAAGAATGATGCCAATCAGTTGGTTCTTATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTG ATTTGTATGTCCTGGAAAGAGCTATTCTTTCAATGCATTCTTCATGTGGGAATGTGATGGATCAGGTACTTGCAGCATAC CACAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGTGCGACAAAGAGGACGAAAGAGCACCATGGT TGGGTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0041800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

METEADLKDSSLILIRQGAEAEARCMTKARRLGVRTPVLYAVDPVLHTLTFEYVEGPSVKDVFLEFGSLGVNKERLGNIA SQIGDAIGKLHDGGLVHGDLTTSNMLLKNDANQLVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDQVLAAY HKSSKQWSSTLNKLAQVRQRGRKSTMVG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 188 188 13.291
IPR000719
Gene3D
G3DSA:3.30.200.20
9 54 46 4.7E-6 –
SUPERFAMILY
SSF56112
13 136 124 8.5E-20
IPR011009
TIGRFAM
TIGR03724
17 182 166 1.8E-42
IPR022495
PANTHER
PTHR12209:SF1
21 188 168 8.1E-101 –
PANTHER
PTHR12209
21 188 168 8.1E-101
IPR022495
Pfam
PF00069
48 124 77 2.0E-10
IPR000719
Gene3D
G3DSA:1.10.510.10
70 185 116 2.4E-35 –
ProSitePatterns
PS00109
95 107 13 -
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0041800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…