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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0044000 |
| Transcript ID | LotjaGi3g1v0044000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homogentisate 1,2-dioxygenase; TAIR: AT5G54080.1 homogentisate 1,2-dioxygenase; Swiss-Prot: sp|Q9ZRA2|HGD_ARATH Homogentisate 1,2-dioxygenase; TrEMBL-Plants: tr|I1LSW3|I1LSW3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0044000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4694581..4698121) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAACATTCCACCGCCGGCGACGACTTCAACTACCTCTCCGGCTTCGGCAACCACTTCTCCTCCGAGGCCCTCGCCGG AGCTCTCCCGGAGGCCCAGAATAGCCCCCTTATCTGCCCCTATGGCCTCTACGCCGAGCAAATCTCCGGCACCTCATTCA CTTCTCCTCGGAATCTCAACCTCTTCAGGTTAATCACCAACCAAACCACTTTCATCATTCTTCACATCAAATTGGTCCTA TGTTCGAAGCTGATTTTTTGTTTGTTTTTGGGTTGTGAATGTGTAGTTGGTTTTATCGGGTCAAACCATCGGTGACCCAT GAACCGTTCAAGCCTCGGGTTCCTTGTAATGGAAGGATTTTGAGTGAGTTCAACCACTCCAACAGTTCTACTAACCCAAC ACAGCTTCGATGGAAACCGATGGATTCGCCTGATTCACCCACGGATTTCATTGATGGGTTATCTACGGTTTGTGGTTCTG GTAGCTCCTTCATGCGCCATGGATATGCTATTCACATGTAATCAATTGATATCCTGTTATTAATTCAGTTGTTGACTTCT ATTTTTGGGTGGTGCTTATAGTCATGAGCTTAATTCACTTCAATTATGATGTATGCTCTATTCTTTGTTGGCTAAGAATT TTAGGATTTTTGATCTATGGTGGAAGAGAGTTGATATCAATCATACACCTGAGTGACCTGACATTGGTGGGGTTAGGGAG TAGGGACATGTTTAAAGTGAGCACAAATGTGTTATTACATGTCAAGTTAGGAATGCTGATAGTTGATTTGGGTGGTCCTC AACTAGGACAAGATCTCTGTAGTTGGTGAGACTTTAAATGCTGATGCTGGAGGTGATATATATACACTGCATAGACATTG ACCCTCTTGCAGTCATGCTATTTTTAGGGATATCTTTAGGAGTGAATTAAAAGGGGCGAAGATTAGTAACTAAGTGGCTA AAATCTTCTATTGGTGTTACTTGAAGTGCAATAAATCTAAGATATTGCTCCCTGGCTATTTGGGATCTAGTTCTCTGTTA CTAGGGGTTGAGTCATGAAGGGATTTTATCCCCTCTTTGCCTCTATCCAGAAATTGGGAGATGCTGTGAGGGATTTTAAC CCCTCTTTGCCTGTATCCAGAAATTGGGAGATGCTGTTTAGTTATTAGGCTCATAAAAGCTGTGCCCCAGAGGCCTCATT TTAGTGGGTTTGCATCATGTTTCCCTGGTCCTCCTGCACTAATTGTGTGGGTCACAGGCTGGGTTGGTGGGGTCCCAAGT TTCAGTCCAGAATAATTGTCATGGTCTAAGCGAGATGAGTGATGAGTAATCAAGTAATTGGACAAGTTGTTCTATGCTAA ATGATTTGTTGACATAAAAGTTTATTTATGTTTGCCATAAGTAATGTTACTATGGATTGCTGCCATAAAAACGGTTTTGT TAGCGCGGACTGATTTTAAGGGTACAAATAGTGGAAAAAGAAATTAGAAAGGAAAGTATTTATTGCAATGGAAATAGATT TGGTATGGAAATTTTTTAAATTTTGAAGGTAACATTAGCTCTTTAATAAATGGGAAATGTTATATGACTTATAGGTACAC TGCTAACAAATCAATGAACAATTGTGCCTTTTGCAATGCTGATGGTGACTTCTTGATAGTTCCCCAGCAAGGAAGTAAGT AACTATAACAAGCTCCTTATTTGTTCACTAGAAAGTTGTATTTTGGGTTTATTGCATTGTGCTTGAGTACTTGTGTTAGA AGTTAGAACTCTTTCTGTACCCATATAATTTCTCTATTGATCGGCCGTCGGCCCTCAATGAACTCAGGGTCCTGTCTTTC CCTTTCTGCCAAAGTAAAGATAGTGTACATCTTCCTCTTGATACTTGAATGCAAAAGGAATTTCCTTGTGGAAGGATGCA TTTAAATAATAAGTAATATTTCTCAGAGGGCTGGTGTGAATGTCTTAATGAATGGGTTCGTTGGTTTTTATATTTTCCAT GATTTCTTTCATTGGAGTTGTCTTTGGCTCTTTATGTAGAATCTTGTTACTAGATGGATTAATAATTCTCACCATTTTTT AATTCTTCCATGCATTGGTACCTGCTTTGCTGTTGGAGCTAATACCAGTTTCATGATTCTTAGAGTATGCTTTAATGCTT CCTGTGCGTCAGCTTTTGGAGAGAAATCTTATCCCATTTTATTTATCTTTCTGAACACCTTCTGCTGGATTTGCAGGACT CTTCATAACTACTGAATGTGGAAGATTGAAAGTTTCCCCAGGTGAAATTGCTATGCTACCCCAAGGTTTTCGTTTTACTG TCGATCTGCCTGATGGTCCATCACGTGGCTATGTTGCTGAAATTTTTGGTACTCATTTTCAACTTCCTGATCTGGGACCA ATAGGTATCTTCTCTCTCTTGTAGTTAAGAAATTTAAGCAACCATATTTATTGCTTAAAAATTCATAATATGTATAATTA AAAAAGTTTTGTTTGCATCTTAGGTGCTAATGGTCTCGCTGCCCCAAGGGATTTCCTTGTTCCTACAGCATGGTTTGAGG ATAAATCTTATCCTGGGTACACCATAGTACAGAAGTTTGGTGGTGAACTATTTTCTGCAGTACAAGATTTCTCTCCCTTC AATGTTGTTGCTTGGCGTGGTAATTATGTTCCGTATAAGGTATGGTTTTCTCATCTACACTGTTTAAAGAGAATGAATGA GTCTTAATTAAAATCCTCATCATGTCATTTTCAATTTGTCAGGATCTGGGATAAGGTTCCTGTGAAAACTTTCATCTAAT ATGATTAATTTGGCTACTCTTCTTTTCACTTGCAGTATGATCTTAGCAAATTCTGCCCTTACAACACAGTTCTCTTTGAT CACAGTGATCCATCAATCAACACTGGTATGCATTTTCCAAAAGAATTTTCCCTGAACCACTTTCTCTCGTCTTTTTCGGT TCAGTGAAATTCCTTGTTTAACAATTATTGCTCTTATATACAGTGTTGACAGCACCAACTGATAAGCCTGGAGTGGCATT GCTTGATTTCGTCATTTTCCCGCCCAGATGGCTGGTTGCTGAACACACTTTCCGGCCTCCATATTATCACCGCAACTGCA TGAGTGAATTTATGGGTCTCATCCATGGTGGCTATGAGGTGCATTATATCAAAAATTGACTTTTAATCACTGTTTGTTGG AAGCATTATAAGGTTTACATTTTTGCTGGTCATTAGGCAAAAATTGTGTCTTCTCTAGCCTGTGCCTAATACATTTGTTT GGCTTCTTTTCAGGCGAAGGTTGATGGGTTTCTTCCGGGCGGTGCAAGTCTTCATAGCTGTATGACTCCCCACGGTCCTG ATACGAAGTCATATGAGGTATGGTTTTTCTGAACAATCAAGAACACACTATAAGATCATTCTTGTACCATCTTTGTCTAC ATCCCTAAATCGAAAACCTTATTAGTTATATGTCATTTGCCGATAGCTTATTTGGATCACCTTCTCTTTTCTTATATTCA ATTCTGGCATTCAGAAGCTAA
CDS sequence (LotjaGi3g1v0044000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACATTCCACCGCCGGCGACGACTTCAACTACCTCTCCGGCTTCGGCAACCACTTCTCCTCCGAGGCCCTCGCCGG AGCTCTCCCGGAGGCCCAGAATAGCCCCCTTATCTGCCCCTATGGCCTCTACGCCGAGCAAATCTCCGGCACCTCATTCA CTTCTCCTCGGAATCTCAACCTCTTCAGTTGGTTTTATCGGGTCAAACCATCGGTGACCCATGAACCGTTCAAGCCTCGG GTTCCTTGTAATGGAAGGATTTTGAGTGAGTTCAACCACTCCAACAGTTCTACTAACCCAACACAGCTTCGATGGAAACC GATGGATTCGCCTGATTCACCCACGGATTTCATTGATGGGTTATCTACGGTTTGTGGTTCTGGTAGCTCCTTCATGCGCC ATGGATATGCTATTCACATGTACACTGCTAACAAATCAATGAACAATTGTGCCTTTTGCAATGCTGATGGTGACTTCTTG ATAGTTCCCCAGCAAGGAAGACTCTTCATAACTACTGAATGTGGAAGATTGAAAGTTTCCCCAGGTGAAATTGCTATGCT ACCCCAAGGTTTTCGTTTTACTGTCGATCTGCCTGATGGTCCATCACGTGGCTATGTTGCTGAAATTTTTGGTACTCATT TTCAACTTCCTGATCTGGGACCAATAGGTGCTAATGGTCTCGCTGCCCCAAGGGATTTCCTTGTTCCTACAGCATGGTTT GAGGATAAATCTTATCCTGGGTACACCATAGTACAGAAGTTTGGTGGTGAACTATTTTCTGCAGTACAAGATTTCTCTCC CTTCAATGTTGTTGCTTGGCGTGGTAATTATGTTCCGTATAAGTATGATCTTAGCAAATTCTGCCCTTACAACACAGTTC TCTTTGATCACAGTGATCCATCAATCAACACTGTGTTGACAGCACCAACTGATAAGCCTGGAGTGGCATTGCTTGATTTC GTCATTTTCCCGCCCAGATGGCTGGTTGCTGAACACACTTTCCGGCCTCCATATTATCACCGCAACTGCATGAGTGAATT TATGGGTCTCATCCATGGTGGCTATGAGGCGAAGGTTGATGGGTTTCTTCCGGGCGGTGCAAGTCTTCATAGCTGTATGA CTCCCCACGGTCCTGATACGAAGTCATATGAGGTATGGTTTTTCTGA
Protein sequence (LotjaGi3g1v0044000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEHSTAGDDFNYLSGFGNHFSSEALAGALPEAQNSPLICPYGLYAEQISGTSFTSPRNLNLFSWFYRVKPSVTHEPFKPR VPCNGRILSEFNHSNSSTNPTQLRWKPMDSPDSPTDFIDGLSTVCGSGSSFMRHGYAIHMYTANKSMNNCAFCNADGDFL IVPQQGRLFITTECGRLKVSPGEIAMLPQGFRFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWF EDKSYPGYTIVQKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTDKPGVALLDF VIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPGGASLHSCMTPHGPDTKSYEVWFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 384 | 379 | 2.6E-206 | – | |
| PANTHER | 6 | 384 | 379 | 2.6E-206 | ||
| SUPERFAMILY | 9 | 384 | 376 | 6.89E-146 | ||
| TIGRFAM | 10 | 384 | 375 | 2.0E-177 | ||
| Pfam | 11 | 384 | 374 | 1.4E-190 | ||
| Gene3D | 272 | 386 | 115 | 1.7E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Homogentisate 1,2-dioxygenase activity | Catalysis of the reaction: homogentisate + O(2) = 4-maleylacetoacetate + H(+). | ||
| Biological process | L-phenylalanine catabolic process | The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid. | ||
| Biological process | Tyrosine metabolic process | The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0044000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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