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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0047300 |
| Transcript ID | LotjaGi3g1v0047300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT3G15350.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|A0A151RIJ8|A0A151RIJ8_CAJCA Xylosyltransferase 2; Found in the gene: LotjaGi3g1v0047300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5035707..5041718) extracted from Lotus japonicus Gifu genome v1.2.
GACTCATTGACAAGGACAACTACAGTAATTGTTTAGTTTTCTGCAGTTATATTCTTTTGCCACTTTATCATTTTTTTCAT GCTCTAGGTTTGTCTCTCTCTGATAGGAAATGCATACTGTTACAAATCTCATGCTTAGGCATGTATCACCTAATGTTGGT CATTTAAAATGTCCTTTAACTTTTCTAAACTTAGTTAACAATCTATTTTAATTGAGCAATATGCATTCACACTCACTTTA TTTGCATTTCTCTTCTCTTTCAATTATATTACTCATCACATCTGCTATTTTTTCTCACTTTTCTTCATATCTCCTCTCCA CTCCTTCTCCACTTATTTGAGGTGTCAATGAAACTTAATTGCTTTTTTTTTACTCGCTAACCATCTCTTAAATTCAATAC GTGATGTTGATTCAGAATTCAAAGGCAGTGAGTGTTGAGAAGATACATGAAGAGGATTTCAAATATGTTCATTTCAGTGG CAACTAAATGGTGAATTTGCTTCATTTAGATTTCAGTGATTCATGGAATTCAATTCAGAATGAGAGAAACAAGAAGCCAT GATAAATCTCACTGATGGGATCCTTTGAAATGGATAAAAAGTTGCTATCACCTCTCATTTTGATCTCTGTGTTCATATTC TTTCTTTACACATACTTTGATATTCTTTCTTTTTATCAAATCTTCAGTTCAATGTTCTTCTTTCTTCCATCTCAATTGTC CAGAAACCAAACTGCTCCACTTTTTGTTGAGACAAAGATTTCTCCTTCTACATCTCTTGTAGGGTCTGCAATTCCTCGTT TTGCTTATTTGATTTCGGGATCAAAAGGCGATACGGAGAAGCTTTGGAGAACTCTCCTTGCCCTTTATCACCCACTAAAC CATTACATTGTTCATTTGGACCTTGAGTCACCTCTACAAGAAAGGTTGGAACTTGCTTCTCGAATTGGGAAAGAGCCTGT TTTCAATGAGGTTGGGAATGTTTTGATGATTCAGAAAGGTAACATGGTCACTTACAGAGGACCAACAATGGTTGCTAATA CTCTGCATGCTTGTGCTATCATGCTCAACAGAAGTAAAGACTGGGATTGGTTTATAAACCTTAGTGCTTCAGATTACCCT CTTGTGACTCAGGATGGTTAGTTTTTCATCTATAAGACTGTTTCATTTAGCTTTTTGTTCTGATTCAAAGTATGCTTCTC GAAACCCTCCTAAAATTGATTCAATTCAGGAAGAAGTTTATATGAGTACATGTTTGGATCAGCATTGTCTAATATTGATT TTGATAGAACTGATTTTGGTTAAAATGATTATGATAAACATGAATTGAAAGTGTTGAGTAATGTGTTGAATTAATGTTTA GTGGAATAAAATTGTACTTATTGTAGAGTTACAAGTGGTTAATGTTAGTGGAAGCACTTAGTGCTTAATGGAGTGTTAAA GAAACTAGTGGTGACTTCTTGATAATTGTAACTCTCACTCACTGAGTACATCTGTATGAGTTACATAAAATAATAAGAAA AATACAAAGAGATTCAGCACCCAAAACACTTTCTCTTACTTTAATTTTCTGCGAAGTTAAGCAGTAGACTTTTGTGTGTT AGTATCTATTTCCACCTTAAGAATACCACCAACAGATAGTGATGTGATTTATATTTCAGTACCTTCACGGGAAAAGTGAA TTTTGTAGGCTAATGTTACGAAATTCTGTTGTAAAATCTTAGAATTGATTATGTTAAATGTAGAAGTTACTTTTACTAGC TTCTAGCACATTTGATTTAGGGGCTGAAATCAATTCTTCATAATGACTGCTGAATAAATTATTGAGTTTCAGAATTGATT TATATAAAAGAAAAGTGGATCGAAAACAAGCATGCTATTTATGCTCAATGATTGTTAGACTAATATGGGTAGATGTTTGT TTGTGCAGATCTGCTGTATACATTTTCTGATTTAGATAGAACCCTTAACTTCGTTGATCACACAAGTCATTTAGGATGGA AATTGTAAGTTTTTTTTTTCTCTGACCCTTCCCTTACATAGTGATGAGTTGTGCTCTTCCATTGAGATATGCAACCTTGA TTTATACAGAATGAATTGAACTATGTTGTGTGCTGTGTAGGGAAAAACGAGCAATGCCTTTAATTATAGACCCAGGGCTT TACATGTCAACCAAGTCTGATGTCATTTGGGTTGGTCCTAAGAGAACTTTTCCAACAGCATTTAAACTATTTACTGGTTA GTTTGTCTTAATTTCTACACCTTTGTTCCTTTCTCCTTGTAGAAACTTATCAGTTGATTATCATTCAAATGGCTCACTTA TTCTTATTTGAAGAAATCTTGAGAGGTTGCATATTGATCAGAAATATGATTTCGGAAATCCTCCTAAAGAGCAAACCATT CATCACCTTTTAAAATGATATCAAAGTGTATCATATATATATACTCCATCCGGTCCTATTTATAAGCAACAAAAAAAAAT TCACATAGTTTAAGAAATGTAGTTAAACTAGATAAAATGCATTAAATTTGTCTTAAATCAAAATAAACTTCCAAAATTAC CCTTTGTTATTAGTGTTGGAAAGTGGGAAAAAGAGAGAATAATTAATGAGACACATTTTACAAGTTAGAATTAATAAGGA CATCATTGGAAAAAATTAATTAATATAGCTCAAACTTTCATTTGGTTCTTATAAAAAGGACCAAGGTTTTTCTTCTCTTT CATGCTTATAAATAGGACCGGAGGGAGTACCTGTTTGTTAGGCCATCCATAAATGAGTTTACACGCAGATGTCAAGTCCT GCAAATTCCATGCTCTAAATGTCCAATATTGGGCGTGAAGTTGAAGTGTGACTGAGAAGTCACACATTAACTAGAGATAT GATTAAATATAAGGATAGAGCATACCTGTGAGCTAGGAAATAACTGATGCACGAAGGATTGTAATCTGTCCATGCGTAAC TTCAAAACAAGTGTTATAACAGTAAAGAAAAAGGTGCTTGCTACGATACCACAATACTTAGTGTGGGTATAATACACGAA AGGCTGTGGACCAATTAGAACCATTCACATCCTCCATATTTAAAAAAAAAAACAAAAATATAAATAAAAAATGAATAAAT GTAAATTATTTATTGGCCATGTCATTCATGTATGATACTTAGTGTGGGTATAATACACGAAAGATTGTGGACCAATTAGA ACCATTCACATCCTCCATATTTAAAAAAAAAAAACAAAAATATAAATAAAAAATGAATAAATGTAAATTATTTATTGGCC ATGTCATTCATGTATGATACATTGTGGGTATCATAGAAACCACCAAAGAAAAATGTGCTTATTTGAGGAAAGATTAGCTT TTTACATCAAGAAAAATGAGAGAATAACTAATAAGAGTATTAACAATGTTACACTTTCATGTCAACCATTTTTTCTATGA ATTGATGTAATAGTACTCCTAGCCTTATTAATTACTGAGGGTATCAATTTTTTAGGCTAGTCTTCTCAGTTATCACAAAG CAGCTTATATATTTTCTTTTTTGAGGTGGATACATTCTTATAACAGGGCTAGCTTTTCATACTCAAGAAATAGAATGAAT TTCAAAATTTTAGGGTCTGTTTGGTTTGAGAAAACGTTTTCTATTTTCATTTTCATTTTTCATTTTCTGAAAACAGTTTT CATTTTTAAATTTTTAAGATGTAGAAAATGTGTTTGTTTTGAATTTCTATTTTCAAAAACTAAAAATATTGGAAACATGT TTGATTTAACTATTTTTAATATAAAATTAATAATTATTGTTTTAAATACATTTAAAACAAAGAACAATAGTCCCGGGTTC CTTAAACATTTAGTTCAAGATTCGATATTTGAGCGGTGCGTATGAGAAATCTTCTATTTAAAGAGACGTATTCACTTAAC GTGATCTCAGAAACTCAGGGGATTACTCTCATAGCTACCGATAATATTTTTTGGTATAAATATCCGGTACCATGTCACTC TTTGAATGCTGCCAGAGTCTTAAGACTCTTCATCCCTCCCTAGAGTGTATTGTGTGGGAGTCGAACCAGAGAGCTCTTCC CACACGTACACTCAGTCTGCGTTACCAACTGAGCTACCTCTCTTGGGTAGCTACCGATAATATATAGAATATATTGGAAA ACCAAAATATAATATACATTTAATACAAATTAGTAATAAAAATAAACTTATATCTCATTAATGAATAGTTTATGAATAAA AAATATAATTAAAATAATATATGTGTTCATTTATCAAGTGCCCTGGAACTATACGTACCAAAAAAAAAATTCAAGTAGAA CTATGGAACGTACAAAGAAACGGAAGAGAGAGAAAGAGTAATGAGAAGGAGGCGGGTGCAATCAGATAACCAAAAAAGGA AATAGTTATGAAAAAGAAAAAACTTCACCATATTAACAAGTTTGCCACCGCATTTTCTAAAAGTCTGAAAACGTAGAAAA CGTTGTTTTTTTATTTTCAAAATTGGGGCCATTTCCAGCACCATTTTCTCTGAAAACATTTTCTTTTTTCTGAGCAAACA TATTTCCAACTTTATTTTCAGTTTTTAGTGAAAATGAAAACAGAAAACGTACAAACCAAACAGGCCCTTAGTTTTTCCTT GTGTCACCCCTCATTTTCAGAAAGAGTAATGATACCTAATTATACAGAATTCTCGTGACATCCATCCGATATACACATTA CCGGTGATTTTTAACCTCTGTAAACATTTGCGGCTGTTAAGACAGCTGTTGTGTATGTTGGAAGGGTTTCAGTGAATTCT GAATGTCTGCCAATCATTGTTGTTTCAGAAAGACTAGTTGCTAAAAATCGCTGCTAATGTGCAGGGTCAGCATGGATGGT TTTATCACGAGCATTTGTAGAATATGTTGTGTGGGGTTGGGACAATCTACCAAGGACCCTTCTCATGTACTACACCAATT TCATCTCCTCCCCTGAAGGCTACTTCCAAAGTGTTGTATGCAATGTGCCTGAACTCAGAAAAACTGTTGTCAACAGTGAC TTGCACTACATTTCTTGGGACAATCCTCCAAAACAACACCCTCATATCCTCAACATTAACGACACTGACAAAATGGTTGC AAGCAATGCTGCATTTGCAAGGAAATTCAAGCAAGATGATCCAGTCTTGGATGTGATTGATCAGAAATTGCTAAATCGGG TTAAGGGATTATTCACTCCTGGTGGTTGGTGTTCTGGGAAACCTAAGTGTTCTAAGGTTGGGAACATTTACAGCATTAGA CCTGGTCCAGGATCTCAAAGGCTTCGTATGCTTGTAGCTAAATTAACTTCGAAGGCTAGGTATGGACAGAATCAATGTGA ATAGATCTTATTGGGAATTTTCTTTGTTAGAGTTGGAAGATTCAGAGACAGATGAAAGGTTATTTTAGTGGTTAAATTTG TTAATGTCACTCCTGCATCCATCCAGCACCTTATTTATAATATGCAAGGCAAATCAATTCTATATATGACCTTAGCCAAA GTTGCCGCTTGGAACCATATTCAGAGCTTGTTTGGAAATCATTCTACAATTAATTTTGAAGGCAAAATCAAGTTTGGGAA GAAGTTTCTATGAGTAGTTTCTAGGTATTGGAATTGACTAATTAAAGTGAAGTTAGTTCAAACATGTTACGAGTAGGGAA GGCATGAGGGTCACCTTTGTTTTCCCATTATTTTGTACTCCTCTTTATGAGTTTTGTAATATTTTTATAGCTCCAGCATC CCAACTTGGATTTTTTTAGGCTCAGTCTCTGCAACATCATTGCAAGACATTTCTTTTAACTATCATGATCAACAAACAAG TGGGTTACTGAAATTTATGTATCTTTTTAACCAAGTCTAGAGGCAATGAATGGACTTGATCAACAATACAGGGAATTCCA ATCCTTCAATATGGAAATACTTTGAAAATAAGCAATTGCTACTAAAGAGAAATATGAAAAATCAATTATTGTTTGTAGTC AACACATGTGGA
CDS sequence (LotjaGi3g1v0047300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATCCTTTGAAATGGATAAAAAGTTGCTATCACCTCTCATTTTGATCTCTGTGTTCATATTCTTTCTTTACACATA CTTTGATATTCTTTCTTTTTATCAAATCTTCAGTTCAATGTTCTTCTTTCTTCCATCTCAATTGTCCAGAAACCAAACTG CTCCACTTTTTGTTGAGACAAAGATTTCTCCTTCTACATCTCTTGTAGGGTCTGCAATTCCTCGTTTTGCTTATTTGATT TCGGGATCAAAAGGCGATACGGAGAAGCTTTGGAGAACTCTCCTTGCCCTTTATCACCCACTAAACCATTACATTGTTCA TTTGGACCTTGAGTCACCTCTACAAGAAAGGTTGGAACTTGCTTCTCGAATTGGGAAAGAGCCTGTTTTCAATGAGGTTG GGAATGTTTTGATGATTCAGAAAGGTAACATGGTCACTTACAGAGGACCAACAATGGTTGCTAATACTCTGCATGCTTGT GCTATCATGCTCAACAGAAGTAAAGACTGGGATTGGTTTATAAACCTTAGTGCTTCAGATTACCCTCTTGTGACTCAGGA TGATCTGCTGTATACATTTTCTGATTTAGATAGAACCCTTAACTTCGTTGATCACACAAGTCATTTAGGATGGAAATTGG AAAAACGAGCAATGCCTTTAATTATAGACCCAGGGCTTTACATGTCAACCAAGTCTGATGTCATTTGGGTTGGTCCTAAG AGAACTTTTCCAACAGCATTTAAACTATTTACTGGGTCAGCATGGATGGTTTTATCACGAGCATTTGTAGAATATGTTGT GTGGGGTTGGGACAATCTACCAAGGACCCTTCTCATGTACTACACCAATTTCATCTCCTCCCCTGAAGGCTACTTCCAAA GTGTTGTATGCAATGTGCCTGAACTCAGAAAAACTGTTGTCAACAGTGACTTGCACTACATTTCTTGGGACAATCCTCCA AAACAACACCCTCATATCCTCAACATTAACGACACTGACAAAATGGTTGCAAGCAATGCTGCATTTGCAAGGAAATTCAA GCAAGATGATCCAGTCTTGGATGTGATTGATCAGAAATTGCTAAATCGGGTTAAGGGATTATTCACTCCTGGTGGTTGGT GTTCTGGGAAACCTAAGTGTTCTAAGGTTGGGAACATTTACAGCATTAGACCTGGTCCAGGATCTCAAAGGCTTCGTATG CTTGTAGCTAAATTAACTTCGAAGGCTAGGTATGGACAGAATCAATGTGAATAG
Protein sequence (LotjaGi3g1v0047300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSFEMDKKLLSPLILISVFIFFLYTYFDILSFYQIFSSMFFFLPSQLSRNQTAPLFVETKISPSTSLVGSAIPRFAYLI SGSKGDTEKLWRTLLALYHPLNHYIVHLDLESPLQERLELASRIGKEPVFNEVGNVLMIQKGNMVTYRGPTMVANTLHAC AIMLNRSKDWDWFINLSASDYPLVTQDDLLYTFSDLDRTLNFVDHTSHLGWKLEKRAMPLIIDPGLYMSTKSDVIWVGPK RTFPTAFKLFTGSAWMVLSRAFVEYVVWGWDNLPRTLLMYYTNFISSPEGYFQSVVCNVPELRKTVVNSDLHYISWDNPP KQHPHILNINDTDKMVASNAAFARKFKQDDPVLDVIDQKLLNRVKGLFTPGGWCSGKPKCSKVGNIYSIRPGPGSQRLRM LVAKLTSKARYGQNQCE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 417 | 414 | 2.7E-215 | – | |
| PANTHER | 4 | 417 | 414 | 2.7E-215 | – | |
| Phobius | 12 | 37 | 26 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 38 | 417 | 380 | - | – | |
| Pfam | 76 | 335 | 260 | 5.2E-73 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0047300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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