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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0051800 |
| Transcript ID | LotjaGi3g1v0051800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|K7KBV9|K7KBV9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0051800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5422788..5429314) extracted from Lotus japonicus Gifu genome v1.2.
CAACTGTTTCCTAAACGAGTGACAACATTCATCGAGACCAAAAGTCTAGTGAATAAAGATCTCGCATGCGCGGGTTTGGG AATGAGTCCCTTGATGACAATCACATTGCAACAACATTTTACTGCCCCCTTCAAGTTTAAGATCTTTGTAAAAAAAATAA AAATAAAAATCTAGTTAAATTTGAGGGGAAAAAAGAGAGCGAAAGATGTTATCTTATAAATCAAAGCAATTAAGACATTC AAGGGTATCAAATCAAAGCCAAGAACAATAGTTTTATCACTTTTTGAGGCATATCTTCTTCCTTTCCTCTCATGTTTTGG GGTCTAATGCATCTAACGTTTTATTCTTAGATTGATGTTTACTCATGTTGATTATGCTATGACATGATATCTTATTTTCT AACAGAACGTTTATACTCAACGTTCTCACATAACGCCAGCTTCCTGGTAAAGTACAAATATCAGAAAACGACATTGATAT GCTTACCTGAGACATGCAAAGAGTGCCAATTCAAACCGATGTGGATTTCATTTGCTATTTTGCTTTCATTCATCACATCT CACCCCATCCCCTCCTATATTTTCTGCTTTTCCTCAACAAAAAAAGATCAATCTCCTCCAGGCAGGGTTCTAGCAGATAG AAGAGGCAGCAACATGGACTCAACACATGAACACAGGTATGGTCTTCTGTTTTCTCATCTAGAAGATTTCTTAGCATTAA ACACTTCTTCATGAAATGCATCTGATGGAGACATCATAACCACAATTCTTTGTAGAGAATTATTTCAGATAAGGGAATCA AAATTATGATTCCTATAACAAGTTTCAAAACTAGCATGCCTTCCTGTATCTAGTTTTGTGGAACCCACTTGAACGTATCT TAGGAGTTGGGACTGCCATTTTTGCTACTTCACTCCTACCCTTGACTTTTATATCCATTGCTTAACAGTGGAAGAGAAAA TAATACAAAATTTTCTTTGCTTTAAAGCCAAAGTAGAAACATGATTTCAACTTACAGATTACTCCTGTCTTTGATCCACT TCTGTGTAAGAAAACTTAGGATAATCACATATATAATGTGGTTCAATAGAGCATCGTAGCCAGGTAACTAGCTCTATGGA AAAACACAAGAGTTTTAGATTAAGCATTATTTCCTTGGTTCTTTTTCTGACTCTTACTAAAAGTTTAAGATCAAGTGCAT TTCATGGCAGTGAATATGAAGATTGGGAAAGCAATCATATGGAGAATTCCATCTTAAGTTATGGGTATGTGTTTGAAAGT TCCTTCCCTCCTCTTGTTAATTCTTAAGTTCCACAAGCACTAAAATATATATGTGGTTTTTATTTTCTTGGTTTAAGGAG TGAAATGGAGGCAGACGAATGGCAGATGGTGAAAACCAAGGGGAACCAATTTGTGGTGAATGACCAACCTTTCTATGTTA ATGGATTCAATACTTACTGGTTAATGGTATTTGCTGCGGATAATTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAACAT GCAGCCTCAGTGGGTATGACAGTTTGCAGGACTTGGGCATTCAATGATGGCGAATGGAGAGCCCTTCAGAAATCCCCATC AGTTTATGATGAAGATGTATTCCAGGTGCTTCCCAAGTGCTTTGTCGTTTTCATTTCTTTTAATATACTTGTTGAGAAAT CTCACATTGACTAAAGATATGGTTACGTACTTACGTAAGTCCTTATAAAGGGCCGAACAATCCTAACCTCTGATCTAGCT TTTGAGGTAGAGCTAGACCGAGTCTATCCAACCTCAGTTTATTGTAGACCACCCATAAATCTCCAGCCCTGTAAATTCCA CGCTCCATATGCTAAGTCCTGGATGTGAGAGTGTATTTAGAAGTCCCACAATAACAAGAGATATGACCTAGTAACTCCTT ATAAAAGGGTAGAGCAATCTTAACCTCTGAACTAGCTTTTGCCTAAGAGTTAGGCCTACTACTTGGTCAGTGTACACTCT ACAACATCCAAATATTAATAACAGCATCATGAATTAGGATTGACTTTTAGTATGATCAACTGTCTGTCACCATTGATTGG AGCATAGTAGATGAGCTAGGCACCAACCTGTATGATGATACTGTTTAACTTCTAGTGATATGCATAGCTGAGTAGCACTC CTCATGCAATTCCATTTTATTTATCACAGGCCCTGGATTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGACTCATA TTATCATTGGTTAACAACTGGGAGGCATATGGTGGCAAAGCACAGTATGTCAAGTGGGGCACTGCTGCTGGTCTTAACTT GACCTCTGATGATGACTTCTTCTCACATCCAACTCTCAGAAGCTACTACAAGGCTCATGCTAAGGCAAGTTCCTCCCAGT GCAAAGACCATAGCCACCTTTTTCATTACTTGGATTTGGATTCTGGAACTTAACCTTGTTTGTGATGTTCTGCAATGCTC AACTCCCTAAAGACTAACTTGGTTTCAAAACTATTTTTCACTGTGTAGACGGTCCTGAATAGAGTTAATACATTCACAAA TATCACTTACAAGGAAGATCCAACAATTTTTGCTTGGGAACTGATGAATGAGCCTCGATGCACCTCAGATCCATCAGGTG ATAAGTTACAGGTTTGACCATTCAAAACCTATGCTTTCCGCCATAAATAAAGATTCTGTGCTATTAACTACATTCAAATA ATCAGTTCATTCCATGATATGACATTTTGCTCTCAACTGAACATATTCTAGGAGTGGATAAAAGAAATGGCATTCTTTGT GAAGAGTATTGATACAAAACACCTGGTGGAGATTGGACTAGAAGGATTTTATGGACCATCGACCCCTCAGAGATTTCAGG TCAACCCAAATTCATTTGCTCAACAGGTTGGAACTGATTTTATCAGGAACCACCAGGTTCTAGGAGTCGATTTCGCTTCT GTTCACATATATCCAGACTCCTGGTAAGTTTTTTCAATAATGACTTTAGAATCAACTCTAGCACCCAGAAGCTACTCACA CAAGCTTCTCCCCTTTAGAGTCAATTAGAGAAGTATTTTCAGACATGCTAACATTATCATAATAGTAAACTTCTGCCAAC AAGTTCTGCAAGCTTTTAATGTTCATCTTACTACCATATTCGTACACACAAGTGCATACAGGAATAATCTAATTATAAAC TACAATTTTTGTCCAACAATGTTATGACACTAAAGCATTACTTCTATGCTTTTACCAATCTTCTAACTTTCTAACATCTG CACTTTAAGACATTAAGATGACAGTTTCTGACTAGGAATTATTTACCTGGTTGAAGGATTTCACAATCAGTTGCCGATAA CCATCTCCCATTTATAATGTCATGGATGGAAGCACATATAGAGGACGCTGAAGAGTATCTTGGAATGCCAGTTGTTTTTG CTGAGTTTGGTGTATCTGCAAAAAGCCCTGGCTACAATTCAACATATAGAAACAACCTTATAAACACTGTGTACAAGACC ATCCTAAACTCTACAAAAAAAGGAGGTAGTGGGGCTGGAAGCCTTGTGTGGCAGCTCTTTCCTGATGGAACAGATTACAT GGATGATGGGTATGCAATTGTTCTCTCAAAATCCCCTTCCACGTCAAGTATGATATCCCTTCAATCCACAAGGCTCGCCC TATTCAATTCCTTATGCTCTAAAACATGCCATTGGGGTTGTAAGAAGAAAAAGGTGTTGGAAAATATAAACTATCACGAT GAACTCTGATACCATATGCGGAAAGTTGCCAATTATAGCCATATAAACATGCATGTTTCTCCTAGTGGATGCAAGAGTGT CAACTCAGTTTGAAAATGGTACAAACAACAAAGGAAGTGAACAGTGGAGACAAACCAGTTTTTAATTATGTCAATAGGTC TTTACTTTGTATGCTCTGACATTTACATGGAAATTTCTAAATAAGCAAGCATTTTAGGTGTGAATTCATTGTTATATTAT TGATAAAAACTAGTTTGAAAGCTATAAGCACCATTTCATACAAGAACAGTACTCCATTGACAGTACCACATGGAATTGAA TACATAATCGCATCTTGGATGTAAGTTTCACCAAACAAGACATGAGATATCTCATTAACGTTGCTGCTCCACTTAGCTGG TATACCTTGTTTCAACCCATAGAACCAAAAGTTATGGTCCTGCCAATCTTTGAGCATTCGCCTCTTGTAGAAAGAAATCA TGAGAATTCTGATTAAGCTCTACAACCAGAAAGTTCTCCTTCTTGAGTTAGTTGTCATACAGATTACACCACAATTATAA ATCTATTCGGCAGCAATACTTTTTAACTTCTTTAAAGAAATAGATTCCTCAGGCTGTGCTGAAATTGTTCTGCCCCTGAT TTAACCTTGCGGAGGATAACCCGAGCAGTGAAAAAAATGGAAAAATAATCTTGTATGTGATGGTTTTCAAAGTTAGGTGC TTGCCGTGGGACACCTCTGAATTCAAATGTGCTCCTCCTGATGGAAATAAATGTTTTGCAATTAAAAGCGGTATGGTCCT TAGACTACAAAATATACATGGCTAACCTTCTAATACATTATAAGTAATCCAATGGCAACAGAAATCTATTTTTTCTGACA CTGAGAAACTACCTTTTGCATCAACGAGCAGTTTTTAACTAACTTTATGATGCAAAAGAGATAGTGTCCATGCAAATCAA AACTTATTCATACTAGTGATTTTCATTATCCTGTTTAATACAGTCAGATATAAAGCAGTTTTTATATTCATCTTTAACTA TCTTGCTTAGTTACATACCATGGAAACAGTAAGATAACTCTAGATACATTTTAAGAAGCCAATTTGGACAGCAGCAAGAG GAAACATAAAATGTTCTGCACAAACTTAAATGTAAAAATCTGAAAGATTTACCAGGGATTTAAAATTGAAAGAGTCAGAA AATGGGATGATATACTCACATTGTTAAGCAGATCATCTTCTGCTTAGGCTTAACTTTGAGAGGACTGCAGCTGCCTGATC ACCACCCAGAAGAAAATAAGGATGTCTCAAAGCAGCAGCAGCAGATAAACGTCCTCTTCTTAAGGAACCTCTCTCAGAGA TAAGCTTTGTTGCAAGGTCCCACCCTCTACCAGATTCATCATCGAGAATTTTAAAGTCAGGTCTCAAGCGAGTATAGTCC CTCCACTTTTTCAAATCGTATCCACAGGTTTTTATTTCCAAATTGAAATTCTTCAAAGCAGCAGGAGACCTTAAGGAAGG TATTGCGATTTGCAGGAGTACAATCCCAGCAGAATACATATCAAACAGATCAGGGCTGTTTAACTACAAAAATAATCACA GAACTCCACTTTAGCAATTCCTATGCAACATGTGTGTGTCGAACGGACAGGGCAAGTGGTTCATTACGTCGATATATGAC TAATAGATTAACCACTCTTTTAGTTAATGTTCCTAAGTTAGGAATATCTCATCTAGGAGTTCCAAAATTGCAATTCACCA AAGAATAATGTTGTTTGTGAAAAGATAATAGTCATTATATTGCTTTAGTTAATGTGAATATGTGATGTATTATTTTATAT TTTCTCTAAAATTGAAAACCCTACAGAAGAAACTTAACTTCGACTACATCAATAAGGTATAAGTAATAAAACCTGCCAGA GGATTGGTGAAAGGAAAGCAGCAACAGGCTCTGGAGGAGGACTTGGTGTTTCTTCTGGGAGTACATACAATTCTGGGGGA CAATAGTCGGGATCCAAAAGCATGCGGTTGGGAACATAATTCTTTCCAATCCGCAGGTCTGTTGCTGCACCAAAATCAAT GAGTTTAATCTGACCCCGTTTGGTAACCACTATGTTGGCTGGCTTTACATCCCTGTGAACGATGCCTGTATTATGAATTT TCTTGAGTGAAGTAATAATCTGGCGCATTATTTGCTTGATGATCAATCCATTTCGTTTTGAAGAGTCTACACCTTGCAAC ACACGTCCAAACATGACAGTTTCTATGTTTGAAGGAAACTTGCGATCTTTCATGTAATCACCAAGAGTAAGATCTCCCTG TGATATGGACAACTCTCCAATTAATGCAAGTTAATGAAGGGCAAAACCAGCTATGAAGATGAATTTTAATTTCTATTTTC AAGATAACATTTAACACCATCCAAACAAAATAATTATAAAAGTCCTGATCATTAAGTAAGGTATGTTTAGGTGATCTAAG GCAATTGTCTATACAATATAAATATCAGCTAAAGCACCTCAAACTTCCAAACAAGCCATTTTCCACCTTTTGTGAACTGT GAGTTTGTTTTATCAGCAACAAAACTTCCAAGGAACTCAGCACATGTTTCAGGTGCTGCTCTAGATAGCCTGTAATTGAA CCACTCCTCATAATCACCAAATTCTTCAGCCCCTTGGATTCCAACCTTAACCTGTGCATTCCATTTGTCAGCAGGAAAAT ACATTTTGTATAGGCTTTCTAATAAAAAATAATGAATAGAAATCCAG
CDS sequence (LotjaGi3g1v0051800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAAACACAAGAGTTTTAGATTAAGCATTATTTCCTTGGTTCTTTTTCTGACTCTTACTAAAAGTTTAAGATCAAG TGCATTTCATGGCAGTGAATATGAAGATTGGGAAAGCAATCATATGGAGAATTCCATCTTAAGTTATGGGAGTGAAATGG AGGCAGACGAATGGCAGATGGTGAAAACCAAGGGGAACCAATTTGTGGTGAATGACCAACCTTTCTATGTTAATGGATTC AATACTTACTGGTTAATGGTATTTGCTGCGGATAATTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAACATGCAGCCTC AGTGGGTATGACAGTTTGCAGGACTTGGGCATTCAATGATGGCGAATGGAGAGCCCTTCAGAAATCCCCATCAGTTTATG ATGAAGATGTATTCCAGGCCCTGGATTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGACTCATATTATCATTGGTT AACAACTGGGAGGCATATGGTGGCAAAGCACAGTATGTCAAGTGGGGCACTGCTGCTGGTCTTAACTTGACCTCTGATGA TGACTTCTTCTCACATCCAACTCTCAGAAGCTACTACAAGGCTCATGCTAAGACGGTCCTGAATAGAGTTAATACATTCA CAAATATCACTTACAAGGAAGATCCAACAATTTTTGCTTGGGAACTGATGAATGAGCCTCGATGCACCTCAGATCCATCA GGTGATAAGTTACAGGAGTGGATAAAAGAAATGGCATTCTTTGTGAAGAGTATTGATACAAAACACCTGGTGGAGATTGG ACTAGAAGGATTTTATGGACCATCGACCCCTCAGAGATTTCAGGTCAACCCAAATTCATTTGCTCAACAGGTTGGAACTG ATTTTATCAGGAACCACCAGGTTCTAGGAGTCGATTTCGCTTCTGTTCACATATATCCAGACTCCTGGATTTCACAATCA GTTGCCGATAACCATCTCCCATTTATAATGTCATGGATGGAAGCACATATAGAGGACGCTGAAGAGTATCTTGGAATGCC AGTTGTTTTTGCTGAGTTTGGTGTATCTGCAAAAAGCCCTGGCTACAATTCAACATATAGAAACAACCTTATAAACACTG TGTACAAGACCATCCTAAACTCTACAAAAAAAGGAGGTAGTGGGGCTGGAAGCCTTGTGTGGCAGCTCTTTCCTGATGGA ACAGATTACATGGATGATGGGTATGCAATTGTTCTCTCAAAATCCCCTTCCACGTCAAGTATGATATCCCTTCAATCCAC AAGGCTCGCCCTATTCAATTCCTTATGCTCTAAAACATGCCATTGGGGTTGTAAGAAGAAAAAGGTGTTGGAAAATATAA ACTATCACGATGAACTCTGA
Protein sequence (LotjaGi3g1v0051800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKHKSFRLSIISLVLFLTLTKSLRSSAFHGSEYEDWESNHMENSILSYGSEMEADEWQMVKTKGNQFVVNDQPFYVNGF NTYWLMVFAADNSTRGKVTEVFKHAASVGMTVCRTWAFNDGEWRALQKSPSVYDEDVFQALDFVVSEAKKYKIRLILSLV NNWEAYGGKAQYVKWGTAAGLNLTSDDDFFSHPTLRSYYKAHAKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPS GDKLQEWIKEMAFFVKSIDTKHLVEIGLEGFYGPSTPQRFQVNPNSFAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQS VADNHLPFIMSWMEAHIEDAEEYLGMPVVFAEFGVSAKSPGYNSTYRNNLINTVYKTILNSTKKGGSGAGSLVWQLFPDG TDYMDDGYAIVLSKSPSTSSMISLQSTRLALFNSLCSKTCHWGCKKKKVLENINYHDEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| PANTHER | 24 | 459 | 436 | 9.3E-267 | – | |
| PANTHER | 24 | 459 | 436 | 9.3E-267 | – | |
| Phobius | 26 | 459 | 434 | - | – | |
| Gene3D | 57 | 432 | 376 | 2.1E-135 | – | |
| SUPERFAMILY | 60 | 419 | 360 | 8.39E-80 | ||
| Pfam | 72 | 374 | 303 | 3.7E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0051800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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