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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0055700 |
| Transcript ID | LotjaGi3g1v0055700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Rho gtpase-activating protein; TAIR: AT5G61530.1 small G protein family protein / RhoGAP family protein; Swiss-Prot: sp|Q3E875|RGAPX_ARATH Uncharacterized Rho GTPase-activating protein At5g61530; TrEMBL-Plants: tr|I1LVH2|I1LVH2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5854643..5860486) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTTCTATCACTTCACCTCAGTGGCAAGAGAAGGCTAGTGGTTTCTTTTCTTCCTCAGGTATCCCTCATTGAATCTG GTCACCTTTGTTTTTTGTTGTTCAGACTTCAGACAATGTTCTCTGATTGTTGAAAGATAATTTAAATGTAGGGGTGAAGC TTAAAGAAGCTAGGGAATCAGCGGGGACATTTGTTGGCGAGGTCACAAAGGATACGAAGAGTAATGTTGCTGAAGTGGCG GGACGAGTTGGATCGATTGTTAAAAGTCGGTGGACACTTCTTCAGCAGCCGTCCACAAGACATGCAGTACAGGATAAGTT GATATCAGCTGCTGCTACTACAGGTTCATTCCTAAGGAGAGGCATCTCAGGGACAAAAGAAAAGGTTGTTGTGGGGAAGT CCAAGGTTGAAGAGGTAATGTCATTTGAGTAAATGATTGGGATTGTGATGTGTAACTTCGCATTAAGGCATAAATGCATA ATGACTAGGTTTAATTGCTTTTTAGCATTTTGTTTGCAAAATTTGAAAACTGGTGGAAACAAAAAGAAAACTATATGGTA TTTTTGTAAATATCAGTGAAAAATATGTCAACTTAAAATGAAATAAAAAGCAAACTAAGTACCTTATAATGGGGATTTTA TTTTATTATTACCTACCTTCAGTACTTTACTTTGGTGTAAGCAAAATCTCTCTTCGGATTACATAATTCTGTCAATTGGA TGTGGATAACTTTTGTCTTGGTTATAGATAGGATTGGTTTAAGGCTGCTATGCTGGACATCGTACTAATCAAATGGATGT TTAAATTTTTCTCCATCTTGTCTTTCTTGCTTCTCTCTTTCCTTCTTCCTATGACATTATTCACTTGATATACAGCAAGT TATCATTCACAATGCATTTTTTATGTGCCAATTTGACGCTGATTCTCTACTTTCTTCTCTTTTTTTATTTGGCATCATGG TCATTTATTTCAGGTGGCAAAAATAACAGCACAAAAAAGTAAGACTATCTTGACAGACATTGAAAGATGGCAGAAGGTAA ATAAACTCAGTCTAACTGTGGCACGTGTTTTCTAGTATACATCATTCTCAAATAGACAAATACCCTTACATTAATTTTCT CTTGCAGGGAGTTGCGAAGAATGATGGTAAATTTCTCAAGCTACATAACTGAGCAAGTGATCAGTTCTTTTCATGCATCA TAATCTTTTGTTGACTATGTAGAACTAGTTCCATAGCATCTTGGAATGCATTCCATTTTGACGCCTTTACCATAACACTT TTGATTACTGAAGTGTGAAGCTAGCAGTATAGCAGAATTTGTTTTCTTTATAGATTTTTACTATATTTAAGAATTGTTGC CAGTCTGTATTATGGTAGTTAATTAGTCATCAACTTGACCCCAGTATTTGGAGTTCCTATTGAGGTTACTGTACAGAGGC AAGATTGCAGCAAGCCTATTCCTCAAATATTGGTCAACTGTGCAGATTATCTTATTGTTTCAGGTAGCTGTTTCTAGAGT AAGGCTATACATCCATACATCGGTCTATTTTCTTTTGTTGTTTCTTTTTGTTGGAAGTTTTATTTCATACAATTGTAATT TCATTATTGCAATTTTATGTAGGATTGAACTCACCACATCTCTTCAAATCTGAAGGGGATAAAAAGGTTATTCAGCAGTT GGTTTCCCTATACAACCAAGGTATTTTCAATCTTCTTTCTGTAATGGGAGGGTTATATTATGATATTTGGATGGTGTTGT TTTTATTGGCTTCTGTAATGTTACAGATTCAACTGCTTCAGTGCCAGAAGGCACAAATCCTGTTGATGTAGCAGCTCTCA CAAAATATTATCTTGCTAGCCTCCCTGAGCCGCTTACCACTTTGGAGCTTTATAATGAGATCAAAGGTGCTCGATCCAAT ATATATTCCATGAGAAACATACTGAAGAGGCTTTCAAGTGTTAACTACATGACTCTGGAGTTTATAACAGCCCTTTTGCT CCGTGTTAGCCAGAAGTCACTTCTTAATAAGGTAGGATAATTCTGTAGGTTGGCATGCATATATTTGTTTGGTGGAAGCG GGGATGGGTATTAGGTTTCATATACAGAGTGAGGGCTTATGTTTATATACTGTTCATTAAAATATGTATGGTGGAAATTT GTGGTTCATTTATGTTTATTATGCGATATATATTTTCTCTCCTATAAATATGTCAGGTAATATACTTGCTTTGCTATGTA AAAGCGTATTGGTTAAGAGCATAAGAGGAGTACCATCCCTGCATGGTTGTATTGTGTAATTGTAAAGATTGACTCTTCTC ACTTCTCAAGTTTTTACTTGATGCACCCTCTATAAATATAGGGTACTAGGATGATCATAAGAAGTCACACTCCCAAATGA CGTGTGTTGGAGATATAGATTTTAACCTTCTTCTTTTTTGAATTTAAGTTGTCTTTTTTGAAGTTATTTAAAAATTAAAT GAAAATTTTATAAAAAAACTTGTGTCGTACAGGTATCGTGTCTTATTCAAGTGTCTAAGTTGGGTCGGTTAAGTATCCTT GAGGTGTCTGCTAATTGTCCAATTGTTAAAAATTAAATTTAGTTGGAATCCTGATGAGGAATGTATGACACTTTTCATGA GTATCATACAGGAGCGTATTGGTTAAGACTTAAGAGCATAAGAGGAGTACCATCCATGCATGGTTGTATTATAAAGACTA ACTCCTCTCACTTCTCAAGTTTTTACTTGATGCACCCTCTCTCTGTATATATAGGGTACAAAGATGATCAGAAGAAGAAA CATTCCCAAATGAAGTGTGTAGGACACCTAGGTTTTAACCCTTTTTTTTAATTGAAGTTGACTTTTTTTGAAGTTATTTT AAGATCGAATGAAAATTTTCCAAAAAAATTGTGTCGTTCAAGTGTCATTGTCTTACTCGAGTGTCGGATAAGTGTCTAAA CTGTGTCGGTTAAGTATCCTTGAAGTGTTGGCTAATTGTCCGAGTTGATAAAAATTTAATCAAGTCGGAATCCTGATGAG GTATGTCTGAAACTGTTCATACGAATGTCGTAATGGTTCGGAAAGGTGTCCAACACAACACCTCAAATAGAGTAAGTTCC CATGCTGCGCAGGGAGGGGATGCACATGTAAGCGAGTGAAAAGAGGAGATTGGAGTGAGGGGAGGAGATTATTTATGGAT TTTAGAATACTAAAGCTTTTTAGCTGGGGCAGTGTCCAAAATCTCTCTGAGGAGATTATCTATTTCCATTAAATAATACA TATACCCATGGTTCTCTGTTGCTGGCCTCTGCCAGATATCTAGGATGCCTAGTTTTGGCTCTTTAGCTGTGCTATAGGGA GAGGAAGCAGTGCAATGCTATTTGGGAGTGTGCCTAATCAGCGTATATATAATGTATTTGGCTAGAGCAAAATTCCAGTG TTTTCAATTAATGTATTTTGTCCCCTTATTTTTTATGATAGCATTAAGCAGTGCCTTACCAAGAAAATAGGATTCTGTTT ACAAGGTGCATACACGGCGGAGTAAATGATATGGGGGTTAGTTTGTTAAAAGTCTGTTACAGGGGAAGTTAAGGGGTTAG GGATTAAATAAGAGGAACTGTACACTCATAAACTTGTAAGGCATTAGGGAATAATCAATAGTAACTGAGCGCCTCAGTTG TAATAGGCAGCCCTTGTAAGGTGGTTTTTCCTCCTTGTTCTCTCTCTGTAGCAGAGATAACAGGGTTCATTTTTTTCTCT CATTTTATTTTCTTCTTTCATTCCTAACAGTTTCCTAGCTTATTCTTGGCATTTGGCTGATGATTGTAAACTTGTATGTG AGGGGTTTCATTGTTTGATTTCGAGAGATCTAAGTCTCTAACAAGTTTATCTAGCTTGATTCTTTCATGTTTTCGTACTT CTTGAAGGATTTGTTGTGGTTAATTACTTGTGTTTTCCTCCCCTTCTAATTTATTTTATCTCATGGTAATATTGCTATTT TCCAAATTGCTCAACTTGCTTGCTTTATTCTTAATTAGCAGCCTTCTTCATTCCCTGCAGGATGATCATCATCATGTTTT ACTATTTTTGGTTGCTCATCAGTTGGTTGCATAAGAACAATCACACAGCTTTTACTTGTTTTAGTTTTGATTATGGTTCA TTACTTGTGTTTTGCTCGTTAGTGTACTCAAGATTGCTGACTTTCTTCAGATGGATGCTCGGAGCCTTGCAATGGAAATG GCACCTGTTATTATGTGGCAAATGGGACGGACACCTGAACATTATCGTCAATATTGGAATCAGATGTCAAAAAGCCCTTC TAAAACGACCTTGGATCCACCACCTGGCTCATCCACTGCCTCGTACACGCTTTCTGGTAAGCAAATGATGCCAAAACATG TTAATTTTGGATGATAATTAAACTGACAGAAAATACTATTTATTAGTGGCTTTGCCCAATAGGATGATGACAAGGTAGGA ATTTGCATGTAATAGTCATCTTTAGTCTCTAGTAATTTGGTTTTAGTCTAAGCTTTTTGCCCCCTTTGAGACATCACTAA ATAAATTTTAAAACATAACAAAAAATGATTTGAAGTACCAAATATCTTATCTAGATGTCATGACATGCCTAATGTTACTC TTCATATCCATCCCATTTAAAAATGATCTACATAGTTTCATAACTTCATTCATCTTTCATCTCAAATTACTATAAATTTA TAATCTAACAAACTACGAACTATCTTTGTTCACTTAAGTATGATTAATATATATATCTATAATCAATTGTATTTCTGATA AATAAGTTTGTATGATGTTTTCATTAGTATATAGGAAATTAAATGTATAAGTAGGAGTGGTAGTTTGGTCTAGATTGGAT TCAGTTCCCAAAAATAAAATCCAAAAGCCTTCAATTAAACAAAATTCAGTTTTAATGGTTTCCACTTTCCAGTTTGTTGG TTCGGTTTCTCTCTTTTTCTTTTGGATTGGTTTTTATTGGATTAGATTGGTTTATAAATAGGTCTAATGACATCATTTAA TCCTTGTAATCAAACCCAAATGGTGGAAATGGCTTTTGTTGTCTTTGTTGTAAGCATGTACGTATAAGTGATAATACTCA TTGCTGAAACTTCAAAAGCAGAAACAAAAAAAAAGGGGGCCCTACTGCTTAAATAATAAAATTCTAAAGTGATATCAGTG AAGTGCCGAACTTTTTAAAAGGGCTTTGAAGCAACCTTACTCCACTGAACTGTTTAAAGGGCTTTGAGCTGTTCAACGTA TTCTTGTAAGAATAATCACCTGAGTTGAAATGCATTCAGGACTCAGGAGTGTGGGTTCTGTTTTCTTGTAGTTTTATGAC AGTGGGTAGTAAAATCAATATTATGGATGCAAGTAAAAATTTATTGATTTTAGCCTCTTCTTGGGAGTTGGGATCTTCTT TTTGACGAGTGCAGCTGAATATTTTAAAATCTGGTTGAAACTTGTACTTTTAAGTTGTGTATCTTTGTTATCAACGTTGC ATTCTACTCACATGTCACTTGCAAAATATTTAGGAAGGATGCAGAAGTTAGTTTGACAAGAGATTGTTTTACTTGAACTT GAACTAAACTTGGTCTGCAGAAACTAATGCACAGAGCAAATAACTAGTGCTGATTGGAGATAACCATTTCTTTTCTTTTC TTGTTTCTTGTGCTGCAGATGATAGTGAAGTCATAGATGCATCCTCTCCTATTCCTTTGGATGATGGCATGCCAGTTGAC TTTGATGCGATTGAGGTTGTTCAGTTGCTTATAGAACATCATAATGCAGTTTTCACTGATGCAAATGAGACAGTTTGGAA ATAA
CDS sequence (LotjaGi3g1v0055700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTTCTATCACTTCACCTCAGTGGCAAGAGAAGGCTAGTGGTTTCTTTTCTTCCTCAGGGGTGAAGCTTAAAGAAGC TAGGGAATCAGCGGGGACATTTGTTGGCGAGGTCACAAAGGATACGAAGAGTAATGTTGCTGAAGTGGCGGGACGAGTTG GATCGATTGTTAAAAGTCGGTGGACACTTCTTCAGCAGCCGTCCACAAGACATGCAGTACAGGATAAGTTGATATCAGCT GCTGCTACTACAGGTTCATTCCTAAGGAGAGGCATCTCAGGGACAAAAGAAAAGGTTGTTGTGGGGAAGTCCAAGGTTGA AGAGGTGGCAAAAATAACAGCACAAAAAAGTAAGACTATCTTGACAGACATTGAAAGATGGCAGAAGGGAGTTGCGAAGA ATGATGTATTTGGAGTTCCTATTGAGGTTACTGTACAGAGGCAAGATTGCAGCAAGCCTATTCCTCAAATATTGGTCAAC TGTGCAGATTATCTTATTGTTTCAGGTAGATTGAACTCACCACATCTCTTCAAATCTGAAGGGGATAAAAAGGTTATTCA GCAGTTGGTTTCCCTATACAACCAAGATTCAACTGCTTCAGTGCCAGAAGGCACAAATCCTGTTGATGTAGCAGCTCTCA CAAAATATTATCTTGCTAGCCTCCCTGAGCCGCTTACCACTTTGGAGCTTTATAATGAGATCAAAGGTGCTCGATCCAAT ATATATTCCATGAGAAACATACTGAAGAGGCTTTCAAGTGTTAACTACATGACTCTGGAGTTTATAACAGCCCTTTTGCT CCGTGTTAGCCAGAAGTCACTTCTTAATAAGATGGATGCTCGGAGCCTTGCAATGGAAATGGCACCTGTTATTATGTGGC AAATGGGACGGACACCTGAACATTATCGTCAATATTGGAATCAGATGTCAAAAAGCCCTTCTAAAACGACCTTGGATCCA CCACCTGGCTCATCCACTGCCTCGTACACGCTTTCTGATGATAGTGAAGTCATAGATGCATCCTCTCCTATTCCTTTGGA TGATGGCATGCCAGTTGACTTTGATGCGATTGAGGTTGTTCAGTTGCTTATAGAACATCATAATGCAGTTTTCACTGATG CAAATGAGACAGTTTGGAAATAA
Protein sequence (LotjaGi3g1v0055700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSITSPQWQEKASGFFSSSGVKLKEARESAGTFVGEVTKDTKSNVAEVAGRVGSIVKSRWTLLQQPSTRHAVQDKLISA AATTGSFLRRGISGTKEKVVVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKNDVFGVPIEVTVQRQDCSKPIPQILVN CADYLIVSGRLNSPHLFKSEGDKKVIQQLVSLYNQDSTASVPEGTNPVDVAALTKYYLASLPEPLTTLELYNEIKGARSN IYSMRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKMDARSLAMEMAPVIMWQMGRTPEHYRQYWNQMSKSPSKTTLDP PPGSSTASYTLSDDSEVIDASSPIPLDDGMPVDFDAIEVVQLLIEHHNAVFTDANETVWK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 380 | 380 | 9.2E-199 | – | |
| SUPERFAMILY | 133 | 371 | 239 | 7.85E-36 | ||
| ProSiteProfiles | 139 | 371 | 233 | 26.722 | ||
| SMART | 152 | 368 | 217 | 2.0E-22 | ||
| CDD | 155 | 293 | 139 | 1.3069E-32 | – | |
| Pfam | 155 | 294 | 140 | 2.6E-26 | ||
| MobiDBLite | 311 | 332 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi3g1v0055700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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