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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0058900 |
| Transcript ID | LotjaGi3g1v0058900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q66GR3|BH130_ARATH Transcription factor bHLH130; TrEMBL-Plants: tr|A0A0R0H312|A0A0R0H312_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0058900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6189306..6195764) extracted from Lotus japonicus Gifu genome v1.2.
TGAAAATATAAGGGTGATCACAGAACAACATACTAGATAAATACACCCCAACGGCAAGACAAAAATTAGTTTCCTCTCAA CAACTCTTCTCTTCCTCTTAATTCTGTATCTTGATATTAAGCTCTGGAACATGGTGTTTTAGTTCTTTGGAACATCATTG AAGATAGAATTTGCATTTTTCTTTGGAAGCTCACACATCAAATTTTGAGGTTATCCCAGTCACTAAGGTAAACATGTATA AATATTCTTTGAAACAAAAAGTTTATGTGAGTAGCTTCTGATTAACAGAATTGATTATGCAGAATAATAAGCTGATTAAA GGAAACATGAAGATAACTTCTTTTCATTTCTTTTCTTTTGGGTGATTTTCAGGTTATTATAAAGATGAGTCTTGTGTATA GTCATGCTCTCAAGTACTCTGAAGGGGAAGTAAGGAGGAACCAAGAAATGGATTCAAATAATATTGGTTACCCACAACAA CATTGTCACCAGCAAAATTCTGGACTATTGAGGTACAATTCTGCTCCAAGCTCACTGCTGAAAAGCCTTACGGATGAGGA ACCTTTCAGAAGTGAGGATCATAATCAGAATTACCCTCCCTCCACAAGTTCAGATATGGAATCCATGTTGGCCAAGTTGA TTTCATCCAATTCAGAACCTTTGCATGAGGTTGGAGACAACCCAGTGAAGCAAGAAATAAACCCTGTTTCAAAACATAAT GGTTACTCTTATGTTTCTCCATCTCAAATAACTTACCAACCTCAGCAAACTCAAGGTTTGCCTAATGGTTCTTTAGGTGC TTCTGGGAATTCTTTTGATGGCTCATTGAGTGCAGTGAGGGCTCTAGCTCCTGAAAATTACACACAAAATAAAGGGGGTT CTAGCAATTTCTCCTCCAATCTCATAAGGCAAAAGAGCTCCCCTGCTGGGTTTTTCTCCAATTATTCAGTTGATAATGGT ATGCCTTTTATCTTACCTGGTTACTATCATGGAATATGCTAGTGCAGTGTTTCTTCAATTCTTCTTGTGGTTTCTGATGT GTTCTCGGGAGTTGGGTTTGACACCCCACCTATGGGGCTTGACACCCCACTTTATCAAATACGGAATTTAAAATTCCGTA TTCTCCCTATTGAATACGGAACTTAAAATTCCGTACTGTATTTAAGCATGCGTGTCACATTTTCAACCACTCATTATATA CTAAAACAGATACGGAATTTTATTTTCCGTATTGATACGGAACTTTAAATTCCGTATTTAATAAAGTGGGGTGCAAAGTC TAAGGGGTGGGGCACCAAACTCAATTCCCTGTGTTCTCTCATATGTAAAAGAGATATGGCTAAATACATATTTGGAAATT CATCTACAATTGATTAAAACGTTAGAATTAATTTTGGGGAGAAGTTTTTATGAATTGGTTTTGACTTTCAGAATTGAGTT TAAGAACTTTTGTGAGTAGATTTTGACTTTCGGAATTGATTCTATGAAAAAAGAATTTGATCAAACAGCTGTTAGTCTAA ATTTGAAACAATTTTCTTAAAACCTACTTTAGTTATATCCATAGGAGAGGTTAGTAGACCATATCTGTTCTTAGGTTTTT GGAAATTTTAAATTTGCCTTTCAGAGTTGACCAAAGCTTGCAAGTTAGTTACTACTTAGATTCAATTCATATTAAGTCAG ATCCCTTTTATCTGCAATATTGACCTAATATATAGTAAAGCAATTGGGAAAGATATGTCCGTGATATAAGATCGCTTGTT CACATTTTTCTTGCAAAGAGAGTTGACTTTCATTTTAACAATTCTTTGTAAGAAATAAATGTCTCTGAATTGAAAGAAAC TAATTATATTGAACTTTTTTTTTGGGTGTGTGATATTTGAAAAGGAGGCAGAAAAGCTTGCTGGGTAGCTAGGGAAATAC ATTTCTTTTACTGGGTAGTATATTCTTGTAATGGGAAAATAATGAGCGGACTCCTAAAGTGACAAAGGAAGATAACAGAG AAAAATAACGGATGTGATGAGAAGAGAATGTTGGAGTTCAGAGAAGAATAACAGAACGAGAGAGAAAGAGAGAGTGCTGG AAGATTAGAGATAACAAATGAAAACTGATTATTGATTCATTAGTTACACAACACTGCAATATGCAGCTATATACAACCCA TAACTTGGGCTCACACTCCACTGGGCTTTTACATTTAACCAGGCCCACTAACTAACTACTACTGCTAACTTGGATTATTA CTTAACATCCCCTCCTAATCCAAGAAGCTTACAACAAAACATGTAACAAAGCTAAACTATCACAACAATGCTAAACCAGA TATTGCAGAAAAACCTAATGAAAGGGAAAAAACTACAAAACAGTTCAACAATTAGTTCAGCTGCACAATTCAGAAATTCT TGACATTCAATTGTTCTCTCATATACTTGAACTTGTCAATCTTCAAAGCCTTTGTCAAAACATCAGCTATCTGCAAATTT GTACCACAATGCTGCAATTTAATCCGACCTTTGCAGACTTGATCTCTCAGAAAATGGTATTTGGTCTCTATATGTTTGGA CCTACCATGACTAACTGGATTCTTCGCAAGATCTATTGCTGACTTGTTGTCAATCTTCAGAAGGACAGCTTCATCAGTCT TCAGTCCTAATTCTTCAATCAAAGACAGCAACCACAGACCTTGACATGCAGCACTACATGCTGCTATATATTCCGCTTCA CAAGTTGATAAAGCAACTACAGCTTGTTTCTTTGATGACCATGAGACTGGTGCTTTCCCAAAGTAAAACACATATCCCAT TGTGCTACGCCTATCCACTTGATCACCACACCAATCAGAGTCAGTGTAAGCTACAAGATGTAGATTACCATCCCCTTCCT GATCTGGCAAGTGTCTAGGAAAGAAGACTCCGTGATTAAGTGTTCCCTTTAGGTATCTGAGAATTTTCTTGGCTGCAGCA AGATGTGACTGCCTAGGACAGCTCATAAACCTACTGACCAAGCCAACACCATAAGAAATCTCTGGTCTAGTGTGACACAA AAACCTTAGACAACCAACCAATTGTCTAAACTGTGTGCTATCAACTTCTGCCTCAGTTTCACAAAGTCCCAACTTCAAAT TACCCTCAACTGGAGTTTCTGAAGCATTACAGTTCAACAAATTGAATCTCTTCAAAACCTCTGAAGCATACTTCCTCTGA TGCATAAGAATTCCCTTACTGGTTTGAACAAATTCAATTCCCAGGAAATAAGACAGTTTGCCCAAATCTGTCATTTCAAA TTCACCTTTCAAGCTCTTTTTCACAGCTTCAATTTCTTGAGAGCTACTGCCAGTGATGAGTAAGTCATCCACATAGAGAC ACAAAAAAATCAAGCTACCAGAAGGAAAAGATTTGACGACTTCTAACACACCCCCTCACGTCCAGGATTGAACAGACTGG AACGTGGGATCAACAACGGGTGGCCCAAATATGGGTGATCTCCACAACAAATGGATCTAGGATAGGCTCTGATACCAAAT TAGAAATTGAGAGGCCTATACTCAACCACAAAAGCTAGCTCAAGAGTTGAGGTTTGCACTACCCTTATAAAGCTTATCTT GGCTCTATCTCTAGCCAATGTGGGACTTCTAACACACCCCCTCACGTCCAGGATTGAACAGACTGGAACGTGGGATCAAC AACGGGTGGCCCAAATATGGGTGATCTCCACAACAAATGGATCTAGGATAGGCTCTGATACCAGTTGTTGGAGTTCAGAG AAGAATAACAGAACGAGAGAGAAAGAGAGAGTGCTGGAAGATTAGAGATAACAAATGAAAACTGATTATTGATTCATTAG TTACACAACACTGCAATATGCAGCTATATACAACCCATAACTTGGGCTCACACTCCACTGGGCTTTTACATTTAACCAGG CCCACTAACTAACTACTACTGCTAACTTGGATTATTACTTAACAGAGAAAGATTAAGAGAAAAATGAGGTACAAGTGCAA TGAACTATTTGAGTATCTAAATAATATTCTACTTTTTTTTTGTACCTTATTCTTCTAATGATAAATTGTACATTTCCTTA CCAACCCAACCCATGATTGGGTTTCCTTTAAGAAAAGTTAAGGGTTGAGTCTTTGGTTAGAGAAACTAGATAGGGAAGTT TTGTCCTTTACAAGTTGGTCATTCTCATCTTTACTCAATCTATGTCTAGATTTCTGTTGAATTTAGCGCCGATTCACATT TAAGTTACCATGTCAAAATCTTACTTTTCCGTTTGTACATTATGAAGTAATGGAAAACCAAACATAGCTATACTCCATTT AGTGAGAGCCTGATTTTACATTGGGAATTTGCTACCAGAAAAACAACATATACTTTAGTTTTCTGAAAAAATTACATGTA CTTGCAGGTCTTGCAGCATTAAGAGAGGTAGGTAGTTTTGGAGCCAGTGCTGTCCCAAATGGACATGCCACTACATCAAG TAGTGGGTTACATGGTACTTTCAATTTCTCATCTAGAACATCCTCTTGCTCCACAAGGATGCCACAGATTGCTGAGACTG AACATGAAGATCTCCAAGCAAATTGTGTTGAAAGAAGAAACATTGGAAGCGATACTAGCAACACTATAAGTTACATGCCT AGCTACTTATGGGATGGTTCTGCATTCAATGCCTCCAAAACAGCCACTAACAATAGTGAATTCATGTTTGGAACCACAAA TTTAATGGAAACTATGGTATAGCAGAAAACAATGCTTTTTTTATTTGTTTTCAACCATTTGGCCTTTTTTTATCAATTGT TGATCAGTGAAAATTGCTTACCAGGATGCAGGGTTTGGAAGTCAAAAGCTTTTGACCCACCATTTGAGTCTTCCTAGTTC TTCTACTAAGATGGAATCCATGGACAAGTTTCTTCAAATTCAAGGATCTGTTCTGTGTAAAATTCGTGCCAAAAGAGGCT TTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTGAGTAAAAATGTTTTTAATCAGTTGTTTTTTCAAAGAAACAATTCC CGCACTCAGAAGCTACTCCCAGAAACTTCTCTACAGAACTGATTTTAGCCTTAAAATTAATTGTCGAAAGATTTCTCACA TGCACTAAAAGTCTCATTTGCATTCAGAGCTACATTAAAAACAACTTGGCTGCATTGAAATTTAGACAAGTGCTGTTTTC ATTTGTTATGATCTACATGTTTCAGGAAAGAAGAACACGAATTAGTTCAAGAATCAAGAAATTGCAAGGCCTCTTTCCAC AATCAGACAAGGTAATTAATCTAACTCTCTCACTAGCCTAGCACATTATTTATGTGCCTGAGTGAAGCTTCATAAGCAAA TTGATGAATTGAAACTTCCATCTTGGCAGCAAACAAGCACAGCAGATTTGTTGGATTTGACAACTGAGTACATCAAAGGC CTGCAGAAACAAGTTCAGGTACTAGAGAAATGCAAGGAACTCTTTTGTTTGAGAATTTGTGTTTTTTATAGTCATAAAAA TGCCACTTTATTTTCAGCTATCAGGGCCTCTATGGTGAAAACAACAACTTCGTAATTTTCCTCATTCTACAAATCTTAAA ATTTAGTAACAATGTGAAAATAAACCACCTCATTTTTATGATTATTAGTGAAAATAAAAATCAGAGATGATTTTAAAAAA AATTAACTAAACAGGTCCTAGGTCTTCCCTTTATCATTTAAAAGAAAAGAAAGTGAGCTCTCACTGAAGTCTATATGTCT AACCATGAATATTCTCATCTTGCAGATACTTACAGAAGCAAAGGCAAAGTGCACTTGTACAAGTAATTAGAAAGCAATGC TCTAAACCTTGTACCTGACTTTTATCCTTGTAGCTAACAAAAGGAAGGAGGAATTTTTTCTTTATCTTTAACTTTTAGTG TGCCAAAATTTCATGGCCAGCTGTGTGATTGTAAAGAATAGAGTTAATATATTTGCTATTTATGAATTTTGGTCTGGAAG AATCTCCTTTCAGTTTTGTTTTTCGTTCTCCCTCACGTTTTCCCTTTCTTTTCTTGGCTTGAATGCTAGATTTACAAGCA AAATCAGCGGCAGTCATTGTAAATTTCCACTGCACTAAATGGTTTTGTGGTGTTATACAATAAATAGGGAAAATAGTCAT TGAGGAGTGACACCAACACTGGATTTAACAATTTTATTAATGGGTTGAAATTCATGTAAATGCTGCTAGCATTTTTCATA ATTATTTCGCTAATGGCATCTATGGAAAAGTAGTGGGTGGGTAGTTCACTAGTGCACTGGCACAACACTCTTTTTTTACA ATAGGATAAATATAAAAATAATCAATGGTCAGGATTAACTACAAGAAGTCGGTTGAGTCATATTTTTATTATAGAAGTTC ATGCCAAACAACTTTTAGTTCTCAAGGTATCTCCACAACCGACAGTTATGGGACAATTC
CDS sequence (LotjaGi3g1v0058900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTCTTGTGTATAGTCATGCTCTCAAGTACTCTGAAGGGGAAGTAAGGAGGAACCAAGAAATGGATTCAAATAATAT TGGTTACCCACAACAACATTGTCACCAGCAAAATTCTGGACTATTGAGGTACAATTCTGCTCCAAGCTCACTGCTGAAAA GCCTTACGGATGAGGAACCTTTCAGAAGTGAGGATCATAATCAGAATTACCCTCCCTCCACAAGTTCAGATATGGAATCC ATGTTGGCCAAGTTGATTTCATCCAATTCAGAACCTTTGCATGAGGTTGGAGACAACCCAGTGAAGCAAGAAATAAACCC TGTTTCAAAACATAATGGTTACTCTTATGTTTCTCCATCTCAAATAACTTACCAACCTCAGCAAACTCAAGGTTTGCCTA ATGGTTCTTTAGGTGCTTCTGGGAATTCTTTTGATGGCTCATTGAGTGCAGTGAGGGCTCTAGCTCCTGAAAATTACACA CAAAATAAAGGGGGTTCTAGCAATTTCTCCTCCAATCTCATAAGGCAAAAGAGCTCCCCTGCTGGGTTTTTCTCCAATTA TTCAGTTGATAATGGTCTTGCAGCATTAAGAGAGGTAGGTAGTTTTGGAGCCAGTGCTGTCCCAAATGGACATGCCACTA CATCAAGTAGTGGGTTACATGGTACTTTCAATTTCTCATCTAGAACATCCTCTTGCTCCACAAGGATGCCACAGATTGCT GAGACTGAACATGAAGATCTCCAAGCAAATTGTGTTGAAAGAAGAAACATTGGAAGCGATACTAGCAACACTATAAGTTA CATGCCTAGCTACTTATGGGATGGTTCTGCATTCAATGCCTCCAAAACAGCCACTAACAATAGTGAATTCATGTTTGGAA CCACAAATTTAATGGAAACTATGGATGCAGGGTTTGGAAGTCAAAAGCTTTTGACCCACCATTTGAGTCTTCCTAGTTCT TCTACTAAGATGGAATCCATGGACAAGTTTCTTCAAATTCAAGGATCTGTTCTGTGTAAAATTCGTGCCAAAAGAGGCTT TGCCACTCACCCAAGAAGCATTGCAGAGAGGGAAAGAAGAACACGAATTAGTTCAAGAATCAAGAAATTGCAAGGCCTCT TTCCACAATCAGACAAGCAAACAAGCACAGCAGATTTGTTGGATTTGACAACTGAGTACATCAAAGGCCTGCAGAAACAA GTTCAGATACTTACAGAAGCAAAGGCAAAGTGCACTTGTACAAGTAATTAG
Protein sequence (LotjaGi3g1v0058900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLVYSHALKYSEGEVRRNQEMDSNNIGYPQQHCHQQNSGLLRYNSAPSSLLKSLTDEEPFRSEDHNQNYPPSTSSDMES MLAKLISSNSEPLHEVGDNPVKQEINPVSKHNGYSYVSPSQITYQPQQTQGLPNGSLGASGNSFDGSLSAVRALAPENYT QNKGGSSNFSSNLIRQKSSPAGFFSNYSVDNGLAALREVGSFGASAVPNGHATTSSSGLHGTFNFSSRTSSCSTRMPQIA ETEHEDLQANCVERRNIGSDTSNTISYMPSYLWDGSAFNASKTATNNSEFMFGTTNLMETMDAGFGSQKLLTHHLSLPSS STKMESMDKFLQIQGSVLCKIRAKRGFATHPRSIAERERRTRISSRIKKLQGLFPQSDKQTSTADLLDLTTEYIKGLQKQ VQILTEAKAKCTCTSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 28 | 415 | 388 | 6.9E-113 | – | |
| PANTHER | 28 | 415 | 388 | 6.9E-113 | – | |
| MobiDBLite | 56 | 77 | 22 | - | – | |
| ProSiteProfiles | 347 | 397 | 51 | 13.249 | ||
| Gene3D | 349 | 414 | 66 | 8.1E-11 | ||
| SUPERFAMILY | 350 | 409 | 60 | 4.84E-13 | ||
| CDD | 351 | 402 | 52 | 1.95382E-10 | ||
| Pfam | 353 | 398 | 46 | 2.2E-9 | ||
| SMART | 353 | 403 | 51 | 1.1E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0058900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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