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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0059200 |
| Transcript ID | LotjaGi3g1v0059200.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SURP and G-patch domain-containing protein 1-like protein; TAIR: AT3G52120.4 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A0R0G6V7|A0A0R0G6V7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6219887..6226947) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATAAGGGACCACCTCATAGCCTTTTTGTTAATGATGGTTCGTTCATGGCGAGGTTCAAGCAGCTTCAACAAGAGCA GGGGAAGGGGAAGAATACCAAATTAGAGGATTCTAAACCAATTAAAGTTGTTTCTAGACCGCTGACTCCTAATCCTTCCA TTGGTAAGGCTACTGATGCACGAAAAACTTCCCAGGCTGGTTCTAGTGGCAAACTTGCTTTCAGTTTAAAGCAAAAATCA AAGCTAGTTCCACCCCCTATTAAGTTGACTGATGAGGATGAAGAAGAAACTAATGCCGGGGATGTTTCAAATGACGCACC GTCGAAACGGCAAAAGTTGGGTCAGGATGATGATGCTGAGCAATCATCAAGACCACTTGATGTTGGTAATTACTTCTCAC ATAAGCTATATGCACATGTTTGGTTTGTGGTTAGTATTCTATTTCCCATCAAATGCATGAGGGAGGAATTATCAAGTAAA ATAATCAAATAATGGTTCTATGTTGTGATCCATGTAGTGTGTCATGATGTAATTATCCCAAAAGTTTAAGCTATTGGGTA AATAACGCATGAATGGTTTAATATTATATTTCTTACATGCACCCTCATGCAAAAGCCCAATGGGCTTGAAGCGTGGACAA TGCATAGACAACCTACCTACCTTGTGCTTTTTATTCAACTTTTTATTAGAATAATTATAGACACATCAAGGATCAAACTC TAGACCACTTTGTCATAGAGGCTCTGATAGCATTTCATGAACTAACATATGAAAATAAGATCAAAATAATTTATAGGTAG GTCATAAGTTATTTTCATAAGCTTGCCTAGACATTTGCATTAACGTATATGCTATAAGGTAAAGCTCAAATAAGATCTTC CAAATACAGCCTAAGTAGACGAAGAGTAAAAATCAGTTGTCTTTTTGGGTGTCTTTGTGAATCATGTACTGAACTTCCTT GATTTAGTTGAAGGAAGATTGAAAGTTGGTTGCCTCAGCTAAATGAGGCATACAATTGCATTCATACTATTTATTGCTTC CATTTTTCTTCTCATATAAACTATAAAGTAGAGTCCTCCTCTACATTAAGCTCAGTTTCATTACTGAAGGGGTAATTAGT ATATTCCTTCTTTGCCAAGTGAAGTGGCATTTAGTTGAAGGAAGATTGAAGTTGGTTGCCTCAGCTAAATGAGACATACA ATTTGCATTCACAGTTTCACACTGCTTTTTGCATCCTTTATCTTCTCGTATAAAGTAGAGCCTTCCTCTACGTTAAGCTC AGTTTCATTACTGAAGGGGTAATCGGTATATTCCTTCTTTGCTAAGTGAAGTGGCATTCAGCAAAGAGGAGAAAGTGTCT TGAATATTTTGTATCATGAATGCAGCTTATTCCTCATGTACCTATCAAGAATGGTGTATTGGCACGCCTGCTACGAGAGT AATTTCCATTCCCTTGTTCATGCTCTCGGTATTAATAAGTTTTATAAGTGATATGCAGCACCTCCTTCACCTAGTGATCC TACTGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCAAAAAACGGAAGGCAATTTGAGGATGTTACACGCCAAA AAAATCCTGGCGATACACCTTTCAAGTATGTTTAGAGTGAACTCATAACTATGTTGCCTTGATCTTTTGCTTAATGTTCC TAGTTTCGAATGTAATGTAAATATGTGTTGTTTGTTTTAACATGCAGGTTTTTATTTGATGAACGATGTGCTGACTACAA ATATTATGAATATAGGCTCGGACAAGAGGAAAAGACCCTTTTGCAGTATAGGGAACCACAGGCAATTCATTATGGTTAGT TTTTGTTATGAGTTTGGAATTTGATAAAATAATACTTGTATTTCATTCATAATACTTGACTAGACTACAATATATATATA GACTAACAAAGAGATTAAAACAAACTAAATCTATCTCAACCTATATCTATTTAAATAGATATTATCTCTATTTAAATAGA TACTAATCTAAAATAGATAAACAAATCTTAACTATATCTCTATGAGATAGCACTAATAATAAACTAAATCTTAACAGATA TTCAACACTCCCCCTCAAGCTAAAGCTTACTTAGCTTTAAGCTTGTAACAAATCTAACCCAAGAAGAAAATTATCTTAAT AGATATCCCTTAATAATGACGGTCTTGGCGAATCTCTGAATTGAATAACTTTCAAACTTCTAGTAAATCCTTGGCGGCAA AAAACAACTTCTCATACTTGATCTGGCTGAAATTGATGCAAGACAAAAACCAATTCTTCTGGAGTGTCGTAGGGTAGCTG AGCCAGCAAACAAGGGCGAAAAACCAGCAACAATACGCCCGAAAACAAAACAAGGCTGAAGCAACAACTCACCAACAACA ACCACACAGAAATAAAACATACTTGAGGTCGATCGATTGATGGCTTCTAAGACAAACAATGGTGTCAACTTTGACACAGA CAACTCTCAAACATTAGAGAGTGGGCCAGCGCAACTCGCAGCTGAAGCCCTAAAACCAACAAACCAAACAATCGAGACAA AACAAACGAAGGTGACACTGTCACCTTCAAAACCAAATTGCATAAAGTCAGCCAAGATCAATATAATAAGAGCATCTCGA ACAATGAGACGCAAACAACAACTCAAGTCTCAAAAACCAATGCGGAACCTGAGCGTCAAAACAGAGTTAAAACTCTAAAC CAAACCAAACCAAACCAAACTAAACCAAACCAAACCAAACCAAACCAAACTTGGCCAACAATGAGAGATGGCACAACACA CGTCAAAACAGAGGATCCTTAAAACCAAACCTAGCTGATACACAAAGAGGACCAGCGAGAACAAAGCAGCGGAGAGAGCG GCGCAATCTGGCTGATACACAAAGAGGACCAGCGAAAACAAAGAAGCGGAGATAGCGGCGCGTGGACTTCACACGCAGAG AGATGGGAGGCGCGTGGCTTGGAATCCGGCGGCGGTGGCTGACTGTAGTCTCTAAGATACTTAACAATACCTAACACTTC CCCTCAAGCTATAGCATATATGTCATATGCATAGCTTGTAACAAATATAATTAAGATTTAACAATATCCAGATCCTCCCC TCAAGCTAGAGCATATATGTCATATGCATAGCTTGTAACAAATATAATTAACTTGAGAAGTCGCTGCTGCCGGAGAGAGA TATTCCCAATAATAGTCCAAAATTTATACACCAACAAACCACACAATGCAAAACCAATTCTGCACTTTAATAGAGAGCAA AAATCTTTTCCAACTCCAAAACCACACTGTGCCATCAAAGAAACAAGAAACCAAAACAAGAAACTAGAGCCAACCATGTT CTGAATCTTAAGATCCTTAAATTTAGCGTTGAAACAAGTTTTTGAGTAATACGAGCATACTTCCTTGCTGCCAATCTGGA CCAATGGACTTCTGGAATGGAACAGGGAGGAGAGGAAGACCGGTTCTGGGCAAGAACCGCCAAAAACCGAGAACTGAAAT TCTTAGAATCTGGAGAACATGTGGGCAAAAAGGAAAGAGAACAAGCGTGAGGGCACCATGTGTCTTGCCACAACTACACC AATTGTAGTTTTAAGTCCTAGTTTAGACTACCAAGAGTAACCAAAAGTGATAACTACTGTCCACCAAACCACTGCTCCAT CAACAACTTGCAAACGAAACCCAAAGATGCAAAAACCACAGTAACAGAATTCCACAGTAGCATGGTTCAGACACTTTAAC ACGAGTCACGGCCACAAACGACACGCAAGAAGGGCAGATATGGAGAAACCGACCGCTGGAACAGAATCAAGAGAGCATGG CGAACCTTTCTGTGGAAGCGGCATCACGAACGATGGCTGGGAAGGCGGCACAGCGAACCGACCGTTGATTTGATAGTGGT TGAACATTACTAGGGTTCCAAGAGAAAGGGAGCCATAATCAGAAAGAAACGAGGCCGTAAGAAAACGGCTAGAACTAACA AGCGGAAGCAAAGTAAGAAAAATAAATCCAAAGAGATTTGGAAAGTCACCATGAGGGGGCTCACGGGGGAGGAGCCCCCT CACAGCGGAGGGATCAAAACTAGCTCTGATACCAACTTGAATTTGATAAAATAATACTTGTATTTCATTCATAATACTTG ACTAGACTACAATATATATATAGACTAACAAAGAGATTAAAACAAACTAAATCTATCTCAACCTATATCTATTTAAATAG ATATTATCTCTATTTAAATAGATACTAATCTAAAATAGATAAACAAATCTTAACTATATCTCTATGAGATAGCACTAATA ATAAACTAAATCTTAACAGATATTCAACAGTCTCATTGTGGGCAAGAAATCTGACAGTTATTGCAACATACAAGATTTAA ATAATTTGATAGATAAGATCATAGTAGTCAAGATCGCGACTAAAATTGCTTAATCGCTTAATTATGTGACTAATGGTTCC CTGGGCGATTAAAATCTCATATGTTATCTTTTTCTGGCTTAATCATGGCATAATAGTCAGATTAGTTGCCTCCATAATCA CACCAGAAAGTATTTTTTTTTTCTTTGTTATTTATGCTATTTTATATGCATACATATGAATTTATAAGCATATATATTTG CTAAATCCTATGCTTTTGTGATTTACGATTAACACCCCCCCCCCCCCCTCTTTGACTACAGTCACAATCCCTATTATGAC TTCTATGGATAAGATATAACCATGTTCTCAGAATTATTTTACAATCTGTGAGAGGTTAAACCGCTAATATGTGACATTAT TGGGCTTCCTAGTCAATGATGTCTCATCATGAAGAAAATTATAATTTCACATTTTTTAAGAGTTATTTGTAATAACTGCA ATGATTTTATTGGTATGGGTTGATGCTTGAATCAGTAGCCATATTTCATGCTTCTTTCACCTGCCAATATGTAGATATGT GAAGAGTTGCCATGGTTGTACTATATTCGGTAGCATTTTTTTAATTGGGCTCCCTGGCTCTCTCTGGTCCCTGGAATATG CTTTCTGTTTTCTCTTGACGTGGGTTTATTTGAACTTGGTGTGTAATGGTGAACAATTCAATTTATAAGGGGTACAAGCA GTGGCGGAGCCATGTTGAGACAGGGGAGGGCTGCAGCCCCCCATAGGTCACGTTTTAATTGGTATATATATGTACCTACG CATAATATTTTATATGATGTGTGTTGTCCCAATGGTTGTTACTCATGCTGTATTACTGGTAGGTAGCGTCTTCAATTCCT GCCCAAGCCATTTTTTAATTATATTCCATTTTGACAAGCTTGTTTGTGTTTTTTCTAGGTATGTAAATTTGTACAATTAA TTAGTGCAAGAATTAAAATATTATTTTATTGCAAGAGGAAAGCTAATAGTCTTTTTTTGGTACAAAGAAAAGCTAATAGT CTTAGAGCATAACATTAATATATAAATTTCTCTAATAACTAAAAGAATATTATTAGTATAACTTATAATAAATTTTCAAT AAGTATATAATTTAGTTTAGTCATTAATTTTTATGTATATATGTCTATATAAGTCCATTCGAAATAAAAATCTTTAATTT ATGTTTAATATTTTATTTTAATTTAGCCCCCTCATTATATTTTTTCTAGTTCCGCCACTGGGTACAAGCATATCGTCTTC CAGACCAGCAAATGGTCCTCAGAGGTCTTCTGAGCAGCGGCCAACTTACCAAATCCCTGCTTCTGCTTTATATGAAAGTG GTGATGTACCAAGAACTTCGGGATCTTCAGTGCAAGCATTATCAGTTGTAAGCTCTGGTAAGGGATATATATACAGCAGG GTTGATTTGGTTTTGTATTTTTCTTCTTTGATTCATCTGTTTAATCTGGCATTTAACTGTCATTTTGAATTAGATCAAGG TTTGGTTGATTCAAAATTGCTTAGTTGCATTGCATTTAAAAGATGTGGAGATATAGGGACTGTTTCAGTTCTAGAAAATC TTCTCATAGGTTTTGTGTGTAACTTTTTTGTTGACGCATGCATTTTTATATATCTGTTGCAGCTGAGCCCAGTGGATCAT CAAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAAAGCTGCACGGGAAGAAAGGTCAAAACAACCTAAGCAG TCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCAAGGTACAAATTTTGAGTGCAATCGTGACCGAGTGTTTCTTGGTCC TGGATACATTTTAGTTAAAACGGTCTGAATTCTAGTCTTTGTTTCAATGGAGTAATCTTATGATTGCTTCCTTTTGGATT CAGGGAAGAAAGGCCATCATATGGGTGATTATATTCCCCTTGAAGAACTTGAGAAGTTCATGGCTAGCTGTAATGATGCT GGAGCACAGAAAGTTTTGAAGGAGACTGCAGAGAAGGCCAAAATCCAGGCGGATAATGTGGGCCACAAGCTTCTATCAAA AATGGGTTGGAAAGAAGGTGCTGTATACTTTTCTCAGTTTTATGCCTTTCAAGAGGATTAATGAATCATTAATGCATTTT ATGTTAGCATGTTTAAGAAAATTTGCCTTTTGATATGGAATGTAACTACAGAACTTGCTTCAAGTTTTTGCCTTGTCTGA TTTAAATAATTTGTTATATATTATTGAAGACTATTACATGATAATTACATTTATGTGATATTTATAAATTTATATATCCG TGATATCTTGCACTGCTAACCATTATTATAATCTTATATCCAGGTGAGGGTTTAGGCGGCTCCAGGAAGGGTATTTCGGA TCCTATCATGGCGGGAAATGTTAAGAAAGATCACTTGGGAGTAGGTGCTGTCCAACCTGGGGAGGTGACTTCTGAAGATG ACATATATGAGCAGTACAAAAAGCGCATGATGCTTGGCTACCGTCACAGACCCAATCCTCTGGTAAATGACCTCTCTATT CTGAACCGTTTTGCAGTGGTGACACGGTGAGTTACTTAACCTGTTCTCATGTTGTAATTGTTTTGTTTTTACAGAACAAT CCTCGCAAGGCGTATTACTGA
CDS sequence (LotjaGi3g1v0059200.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAAGGGACCACCTCATAGCCTTTTTGTTAATGATGGTTCGTTCATGGCGAGGTTCAAGCAGCTTCAACAAGAGCA GGGGAAGGGGAAGAATACCAAATTAGAGGATTCTAAACCAATTAAAGCTGGTTCTAGTGGCAAACTTGCTTTCAGTTTAA AGCAAAAATCAAAGCTAGTTCCACCCCCTATTAAGTTGACTGATGAGGATGAAGAAGAAACTAATGCCGGGGATGTTTCA AATGACGCACCGTCGAAACGGCAAAAGTTGGGTCAGGATGATGATGCTGAGCAATCATCAAGACCACTTGATGTTGTGAT ATGCAGCACCTCCTTCACCTAG
Protein sequence (LotjaGi3g1v0059200.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKGPPHSLFVNDGSFMARFKQLQQEQGKGKNTKLEDSKPIKAGSSGKLAFSLKQKSKLVPPPIKLTDEDEEETNAGDVS NDAPSKRQKLGQDDDAEQSSRPLDVVICSTSFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 106 | 103 | 2.4E-18 | – | |
| PANTHER | 4 | 106 | 103 | 2.4E-18 | ||
| MobiDBLite | 23 | 113 | 91 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0059200.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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